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Kubyshkin V, Rubini M. Proline Analogues. Chem Rev 2024; 124:8130-8232. [PMID: 38941181 DOI: 10.1021/acs.chemrev.4c00007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/30/2024]
Abstract
Within the canonical repertoire of the amino acid involved in protein biogenesis, proline plays a unique role as an amino acid presenting a modified backbone rather than a side-chain. Chemical structures that mimic proline but introduce changes into its specific molecular features are defined as proline analogues. This review article summarizes the existing chemical, physicochemical, and biochemical knowledge about this peculiar family of structures. We group proline analogues from the following compounds: substituted prolines, unsaturated and fused structures, ring size homologues, heterocyclic, e.g., pseudoproline, and bridged proline-resembling structures. We overview (1) the occurrence of proline analogues in nature and their chemical synthesis, (2) physicochemical properties including ring conformation and cis/trans amide isomerization, (3) use in commercial drugs such as nirmatrelvir recently approved against COVID-19, (4) peptide and protein synthesis involving proline analogues, (5) specific opportunities created in peptide engineering, and (6) cases of protein engineering with the analogues. The review aims to provide a summary to anyone interested in using proline analogues in systems ranging from specific biochemical setups to complex biological systems.
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Affiliation(s)
| | - Marina Rubini
- School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
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2
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Rulev AY, Zubkov FI. Hyperbaric reactions in organic synthesis. Progress from 2006 to 2020. Org Biomol Chem 2022; 20:2320-2355. [DOI: 10.1039/d1ob01423d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This comprehensive review summarizes the published literature data concerning above 1 kbar reactions for the purposes of preparative organic synthesis (more then 50 mg of the initial substance) from 2006...
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Ji C, Xiao J, Zeng X. Recent Progress in the Stereoselective Synthesis of (−)‐α‐Kainic Acid. ChemistrySelect 2021. [DOI: 10.1002/slct.202102562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Cong‐Bin Ji
- School of Chemistry and Environmental Sciences Shangrao Normal University Shangrao Jiangxi 334001 People's Republic of China
| | - Jie Xiao
- School of Chemistry and Environmental Sciences Shangrao Normal University Shangrao Jiangxi 334001 People's Republic of China
| | - Xing‐Ping Zeng
- Key Laboratory of Small Functional Organic Molecule Ministry of Education Jiangxi Normal University Nanchang Jiangxi 330022 People's Republic of China
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Marine Excitatory Amino Acids: Structure, Properties, Biosynthesis and Recent Approaches to Their Syntheses. Molecules 2020; 25:molecules25133049. [PMID: 32635311 PMCID: PMC7412112 DOI: 10.3390/molecules25133049] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 06/30/2020] [Accepted: 07/01/2020] [Indexed: 11/26/2022] Open
Abstract
This review considers the results of recent studies on marine excitatory amino acids, including kainic acid, domoic acid, dysiherbaine, and neodysiherbaine A, known as potent agonists of one of subtypes of glutamate receptors, the so-called kainate receptors. Novel information, particularly concerning biosynthesis, environmental roles, biological action, and syntheses of these marine metabolites, obtained mainly in last 10–15 years, is summarized. The goal of the review was not only to discuss recently obtained data, but also to provide a brief introduction to the field of marine excitatory amino acid research.
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Chogii I, Das P, Njardarson JT. Efforts Toward a Unified Kainoid Family Synthesis Approach: Unexpected Sulfinamide‐Directed Conjugate Addition Results. ASIAN J ORG CHEM 2019. [DOI: 10.1002/ajoc.201800728] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Isaac Chogii
- Department of Chemistry and BiochemistryUniversity of Arizona 1306 E. University Blvd. Tucson AZ 85721 USA
| | - Pradipta Das
- Department of Chemistry and BiochemistryUniversity of Arizona 1306 E. University Blvd. Tucson AZ 85721 USA
| | - Jon T. Njardarson
- Department of Chemistry and BiochemistryUniversity of Arizona 1306 E. University Blvd. Tucson AZ 85721 USA
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Affiliation(s)
- Mathew L. Piotrowski
- Department of Chemistry; The University of; London, Ontario Western Ontario Canada N6A 5B7
| | - Michael A. Kerr
- Department of Chemistry; The University of; London, Ontario Western Ontario Canada N6A 5B7
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Lei H, Xin S, Qiu Y, Zhang X. Enantioselective total synthesis of (-)-kainic acid and (+)-acromelic acid C via Rh(i)-catalyzed asymmetric enyne cycloisomerization. Chem Commun (Camb) 2018; 54:727-730. [PMID: 29214245 DOI: 10.1039/c7cc07967b] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
A diversity-oriented synthetic strategy was developed for the total synthesis of kainoid amino acids, which led to the enantioselective synthesis of (-)-kainic acid and the first total synthesis of (+)-acromelic acid C. Rh(i)-catalyzed asymmetric enyne cycloisomerization served as the key reaction in this strategy for the rapid construction of highly functionalized lactam, and the resulting vinyl acetate moiety was further utilized as a versatile building block for the installation of both isopropylidene and 2-pyridone units existing in natural kainoids.
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Affiliation(s)
- Honghui Lei
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, 518055, China.
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Suzuki J, Miyano N, Yashiro S, Umezawa T, Matsuda F. Total synthesis of (-)-kainic acid and (+)-allo-kainic acid through SmI 2-mediated intramolecular coupling between allyl chloride and an α,β-unsaturated ester. Org Biomol Chem 2017; 15:6557-6566. [PMID: 28748237 DOI: 10.1039/c7ob01427a] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
A 3,4-disubstituted pyrrolidine ring was effectively cyclized through SmI2-mediated reductive coupling between allyl chloride and an α,β-unsaturated ester, although little has been reported about SmI2-promoted C-C bond formation of an allyl chloride with an α,β-unsaturated ester. Selection of either the 3,4-cis- or 3,4-trans-selective cyclization can be accomplished simply by changing the additives from NiI2 to HMPA during reductive cyclization conducted in H2O-THF. Total synthesis of (-)-kainic acid and (+)-allo-kainic acid, which are pyrrolidine alkaloids used in neuroscience and neuropharmacology as useful molecular probes, was successfully achieved by using the stereo-complementary ring closure reactions promoted by SmI2 for the construction of the 2,3,4-trisubsituted pyrrolidine scaffold of kainoids.
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Affiliation(s)
- Junya Suzuki
- Graduate School of Environmental Science, Hokkaido University, N10 W5, Sapporo 060-0810, Japan.
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9
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Shi H, Li J, Liu Y, Du Z, Huang Z, Zhao N, Li N, Yang J. Formal total synthesis of (−)-kainic acid. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.07.040] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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10
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Inai M, Ouchi H, Asahina A, Asakawa T, Hamashima Y, Kan T. Practical Total Syntheses of Acromelic Acids A and B. Chem Pharm Bull (Tokyo) 2016; 64:723-32. [DOI: 10.1248/cpb.c16-00009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Makoto Inai
- School of Pharmaceutical Sciences, University of Shizuoka
| | - Hitoshi Ouchi
- School of Pharmaceutical Sciences, University of Shizuoka
| | - Aya Asahina
- School of Pharmaceutical Sciences, University of Shizuoka
| | | | | | - Toshiyuki Kan
- School of Pharmaceutical Sciences, University of Shizuoka
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Zhang M, Watanabe K, Tsukamoto M, Shibuya R, Morimoto H, Ohshima T. A Short Scalable Route to (−)-α-Kainic Acid Using Pt-Catalyzed Direct Allylic Amination. Chemistry 2015; 21:3937-41. [DOI: 10.1002/chem.201406557] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2014] [Indexed: 01/11/2023]
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12
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Calaza MI, Sayago FJ, Laborda P, Cativiela C. Synthesis of [c]-Fused Bicyclic Proline Analogues. European J Org Chem 2015. [DOI: 10.1002/ejoc.201403121] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Roy R, Rakshit S, Bhowmik T, Khan S, Ghatak A, Bhar S. Substituted 3-E-Styryl-2H-chromenes and 3-E-Styryl-2H-thiochromenes: Synthesis, Photophysical Studies, Anticancer Activity, and Exploration to Tricyclic Benzopyran Skeleton. J Org Chem 2014; 79:6603-14. [DOI: 10.1021/jo5011125] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Rimi Roy
- Department
of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700 032, India
| | - Soumyadipta Rakshit
- Department
of Chemistry, Physical Chemistry Section, Jadavpur University, Kolkata 700 032, India
| | - Tanmoy Bhowmik
- Laboratory of Toxinology & Experimental Pharmacodynamics, Department of Physiology, University College of Science, University of Calcutta, Kolkata 700 009, India
| | - Sagar Khan
- Department
of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700 032, India
| | - Avishek Ghatak
- Department
of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700 032, India
| | - Sanjay Bhar
- Department
of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700 032, India
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15
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Grosso C, Valentão P, Ferreres F, Andrade PB. Bioactive marine drugs and marine biomaterials for brain diseases. Mar Drugs 2014; 12:2539-89. [PMID: 24798925 PMCID: PMC4052305 DOI: 10.3390/md12052539] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2014] [Revised: 04/10/2014] [Accepted: 04/16/2014] [Indexed: 12/19/2022] Open
Abstract
Marine invertebrates produce a plethora of bioactive compounds, which serve as inspiration for marine biotechnology, particularly in drug discovery programs and biomaterials development. This review aims to summarize the potential of drugs derived from marine invertebrates in the field of neuroscience. Therefore, some examples of neuroprotective drugs and neurotoxins will be discussed. Their role in neuroscience research and development of new therapies targeting the central nervous system will be addressed, with particular focus on neuroinflammation and neurodegeneration. In addition, the neuronal growth promoted by marine drugs, as well as the recent advances in neural tissue engineering, will be highlighted.
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Affiliation(s)
- Clara Grosso
- REQUIMTE/Laboratory of Pharmacognosy, Department of Chemistry, Faculty of Pharmacy, University of Porto, Rua de Jorge Viterbo Ferreira, no. 228, 4050-313 Porto, Portugal.
| | - Patrícia Valentão
- REQUIMTE/Laboratory of Pharmacognosy, Department of Chemistry, Faculty of Pharmacy, University of Porto, Rua de Jorge Viterbo Ferreira, no. 228, 4050-313 Porto, Portugal.
| | - Federico Ferreres
- Research Group on Quality, Safety and Bioactivity of Plant Foods, Department of Food Science and Technology, CEBAS (CSIC), P.O. Box 164, Campus University Espinardo, Murcia 30100, Spain.
| | - Paula B Andrade
- REQUIMTE/Laboratory of Pharmacognosy, Department of Chemistry, Faculty of Pharmacy, University of Porto, Rua de Jorge Viterbo Ferreira, no. 228, 4050-313 Porto, Portugal.
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Abstract
A short total synthesis of (-)-kainic acid has been developed involving a novel diastereofacial differentiating Cu-catalyzed Michael addition-cyclization reaction, which provided access to a chiral pyrroline in a highly stereoselective manner. The chiral pyrroline was converted to (-)-kainic acid via the stereoselective 1,4-reduction of the pyrroline double bond in three steps.
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Affiliation(s)
- Kentaro Oe
- Graduate School of Science, Osaka City University , Sugimoto, Sumiyoshi, Osaka 558-8585, Japan
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17
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Ouchi H, Asahina A, Asakawa T, Inai M, Hamashima Y, Kan T. Practical Total Syntheses of Acromelic Acids A and B. Org Lett 2014; 16:1980-3. [DOI: 10.1021/ol500529w] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hitoshi Ouchi
- School of Pharmaceutical
Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
| | - Aya Asahina
- School of Pharmaceutical
Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
| | - Tomohiro Asakawa
- School of Pharmaceutical
Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
| | - Makoto Inai
- School of Pharmaceutical
Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
| | - Yoshitaka Hamashima
- School of Pharmaceutical
Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
| | - Toshiyuki Kan
- School of Pharmaceutical
Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan
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18
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Kim KH, Lee S, Lee J, Go MJ, Kim JN. Synthesis of hexahydroisoindole-3a-carboxylates by IMDA reaction of Morita–Baylis–Hillman adduct-derived dienes bearing a Z-alkenyl tether. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.08.031] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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19
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Kesava Reddy N, Chandrasekhar S. Total synthesis of (-)-α-kainic acid via chirality transfer through Ireland-Claisen rearrangement. J Org Chem 2013; 78:3355-60. [PMID: 23470056 DOI: 10.1021/jo400001t] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The total synthesis of (-)-α-Kainic acid is accomplished using a linear strategy involving Noyori asymmetric reduction and chirality transfer through Ireland-Claisen rearrangement as key steps.
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Affiliation(s)
- Naredla Kesava Reddy
- Division of Natural Products Chemistry, CSIR-Indian Institute of Chemical Technology, Hyderabad, India 500 007
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Harada S, Morikawa T, Hiraoka S, Nishida A. Development of Catalytic and Enantioselective Diels-Alder Reaction of Electron-Rich Dienes Using Chiral Rare-Earth Metal Complex. J SYN ORG CHEM JPN 2013. [DOI: 10.5059/yukigoseikyokaishi.71.818] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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