1
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Yoshiya T, Tsuda S, Masuda S. Development of Trityl Group Anchored Solubilizing Tags for Peptide and Protein Synthesis. Chembiochem 2019; 20:1906-1913. [DOI: 10.1002/cbic.201900105] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Indexed: 12/22/2022]
Affiliation(s)
- Taku Yoshiya
- Peptide Institute, Inc. 7-2-9 Saito-Asagi Ibaraki-Shi Osaka 567-0085 Japan
| | - Shugo Tsuda
- Peptide Institute, Inc. 7-2-9 Saito-Asagi Ibaraki-Shi Osaka 567-0085 Japan
| | - Shun Masuda
- Peptide Institute, Inc. 7-2-9 Saito-Asagi Ibaraki-Shi Osaka 567-0085 Japan
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2
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Agouridas V, El Mahdi O, Diemer V, Cargoët M, Monbaliu JCM, Melnyk O. Native Chemical Ligation and Extended Methods: Mechanisms, Catalysis, Scope, and Limitations. Chem Rev 2019; 119:7328-7443. [DOI: 10.1021/acs.chemrev.8b00712] [Citation(s) in RCA: 243] [Impact Index Per Article: 48.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Vangelis Agouridas
- UMR CNRS 8204, Centre d’Immunité et d’Infection de Lille, University of Lille, CNRS, Institut Pasteur de Lille, F-59000 Lille, France
| | - Ouafâa El Mahdi
- Faculté Polydisciplinaire de Taza, University Sidi Mohamed Ben Abdellah, BP 1223 Taza Gare, Morocco
| | - Vincent Diemer
- UMR CNRS 8204, Centre d’Immunité et d’Infection de Lille, University of Lille, CNRS, Institut Pasteur de Lille, F-59000 Lille, France
| | - Marine Cargoët
- UMR CNRS 8204, Centre d’Immunité et d’Infection de Lille, University of Lille, CNRS, Institut Pasteur de Lille, F-59000 Lille, France
| | - Jean-Christophe M. Monbaliu
- Center for Integrated Technology and Organic Synthesis, Department of Chemistry, University of Liège, Building B6a, Room 3/16a, Sart-Tilman, B-4000 Liège, Belgium
| | - Oleg Melnyk
- UMR CNRS 8204, Centre d’Immunité et d’Infection de Lille, University of Lille, CNRS, Institut Pasteur de Lille, F-59000 Lille, France
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3
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N. N, Thimmalapura VM, Hosamani B, Prabhu G, Kumar LR, Sureshbabu VV. Thioacids – synthons for amide bond formation and ligation reactions: assembly of peptides and peptidomimetics. Org Biomol Chem 2018; 16:3524-3552. [DOI: 10.1039/c8ob00512e] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis of α-amino thioacids and peptide thioacids and their applications in chemoselective amide bond formation, ligation of peptides/proteins/glycopeptides and synthesis of peptidomimetics are reviewed.
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Affiliation(s)
- Narendra N.
- Department of Chemistry
- University College of Science
- Tumkur University
- Tumkur 572 103
- India
| | - Vishwanatha M. Thimmalapura
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - Basavaprabhu Hosamani
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - Girish Prabhu
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - L. Roopesh Kumar
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
| | - Vommina V. Sureshbabu
- Room No. 109
- Peptide Research Laboratory
- Department of Studies in Chemistry
- Central College Campus
- Dr B. R. Ambedkar Veedhi
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4
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van de Langemheen H, Korotkovs V, Bijl J, Wilson C, Kale SS, Heinis C, Liskamp RMJ. Polar Hinges as Functionalized Conformational Constraints in (Bi)cyclic Peptides. Chembiochem 2017; 18:387-395. [DOI: 10.1002/cbic.201600612] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2016] [Indexed: 11/09/2022]
Affiliation(s)
- Helmus van de Langemheen
- School of Chemistry; University of Glasgow; Joseph Black Building University Avenue Glasgow G12 8QQ UK
| | - Valerijs Korotkovs
- School of Chemistry; University of Glasgow; Joseph Black Building University Avenue Glasgow G12 8QQ UK
| | - Joachim Bijl
- School of Chemistry; University of Glasgow; Joseph Black Building University Avenue Glasgow G12 8QQ UK
| | - Claire Wilson
- School of Chemistry; University of Glasgow; Joseph Black Building University Avenue Glasgow G12 8QQ UK
| | - Sangram S. Kale
- Institute of Chemical Sciences and Engineering; Ecole Polytechnique Fédérale de Lausanne; 1015 Lausanne Switzerland
| | - Christian Heinis
- Institute of Chemical Sciences and Engineering; Ecole Polytechnique Fédérale de Lausanne; 1015 Lausanne Switzerland
| | - Rob M. J. Liskamp
- School of Chemistry; University of Glasgow; Joseph Black Building University Avenue Glasgow G12 8QQ UK
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5
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Sakamoto K, Tsuda S, Nishio H, Yoshiya T. 1,2,4-Triazole-aided native chemical ligation between peptide-N-acyl-N′-methyl-benzimidazolinone and cysteinyl peptide. Chem Commun (Camb) 2017; 53:12236-12239. [DOI: 10.1039/c7cc07817j] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Novel thiol-additive-free NCL using easy-to-prepare peptide-MeNbz and 1,2,4-triazole can be readily combined with one-pot desulfurization and Cys-modification.
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Affiliation(s)
| | | | - Hideki Nishio
- Peptide Institute, Inc
- Osaka 567-0085
- Japan
- Graduate School of Science
- Osaka University
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6
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Sakamoto K, Tsuda S, Mochizuki M, Nohara Y, Nishio H, Yoshiya T. Imidazole-Aided Native Chemical Ligation: Imidazole as a One-Pot Desulfurization-Amenable Non-Thiol-Type Alternative to 4-Mercaptophenylacetic Acid. Chemistry 2016; 22:17940-17944. [DOI: 10.1002/chem.201604320] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Ken Sakamoto
- Peptide Institute, Inc.; 7-2-9 Saito-Asagi, Ibaraki-shi Osaka 567-0085 Japan
| | - Shugo Tsuda
- Peptide Institute, Inc.; 7-2-9 Saito-Asagi, Ibaraki-shi Osaka 567-0085 Japan
| | - Masayoshi Mochizuki
- Peptide Institute, Inc.; 7-2-9 Saito-Asagi, Ibaraki-shi Osaka 567-0085 Japan
| | - Yukie Nohara
- Peptide Institute, Inc.; 7-2-9 Saito-Asagi, Ibaraki-shi Osaka 567-0085 Japan
| | - Hideki Nishio
- Peptide Institute, Inc.; 7-2-9 Saito-Asagi, Ibaraki-shi Osaka 567-0085 Japan
| | - Taku Yoshiya
- Peptide Institute, Inc.; 7-2-9 Saito-Asagi, Ibaraki-shi Osaka 567-0085 Japan
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7
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Tsuda S, Mochizuki M, Nishio H, Yoshiya T. Combination of Thiol-Additive-Free Native Chemical Ligation/Desulfurization and Intentional Replacement of Alanine with Cysteine. Chembiochem 2016; 17:2133-2136. [DOI: 10.1002/cbic.201600455] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Shugo Tsuda
- Peptide Institute, Inc.; Saito asagi Ibaraki-shi Osaka 567-0085 Japan
| | | | - Hideki Nishio
- Peptide Institute, Inc.; Saito asagi Ibaraki-shi Osaka 567-0085 Japan
| | - Taku Yoshiya
- Peptide Institute, Inc.; Saito asagi Ibaraki-shi Osaka 567-0085 Japan
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8
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Boll E, Drobecq H, Lissy E, Cantrelle FX, Melnyk O. Kinetically Controlled Chemoselective Cyclization Simplifies the Access to Cyclic and Branched Peptides. Org Lett 2016; 18:3842-5. [DOI: 10.1021/acs.orglett.6b01847] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Emmanuelle Boll
- Université de Lille, CNRS, Institut Pasteur de Lille, UMR 8161, F-59000 Lille, France
| | - Hervé Drobecq
- Université de Lille, CNRS, Institut Pasteur de Lille, UMR 8161, F-59000 Lille, France
| | - Elizabeth Lissy
- Université de Lille, CNRS, Institut Pasteur de Lille, UMR 8161, F-59000 Lille, France
| | - François-Xavier Cantrelle
- Université de Lille, CNRS, UMR 8576, UGSF, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France
| | - Oleg Melnyk
- Université de Lille, CNRS, Institut Pasteur de Lille, UMR 8161, F-59000 Lille, France
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9
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Panda SS, Jones RA, Hall CD, Katritzky AR. Applications of Chemical Ligation in Peptide Synthesis via Acyl Transfer. Top Curr Chem (Cham) 2015; 362:229-65. [PMID: 25805142 DOI: 10.1007/128_2014_608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
Abstract
The utility of native chemical ligation (NCL) in the solution or solid phase synthesis of peptides, cyclic peptides, glycopeptides, and neoglycoconjugates is reviewed. In addition, the mechanistic details of inter- or intra-molecular NCLs are discussed from experimental and computational points of view.
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Affiliation(s)
- Siva S Panda
- Department of Chemistry, Center for Heterocyclic Compounds, University of Florida, Gainesville, FL, 32611-7200, USA,
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10
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Tsuda S, Yoshiya T, Mochizuki M, Nishiuchi Y. Synthesis of Cysteine-Rich Peptides by Native Chemical Ligation without Use of Exogenous Thiols. Org Lett 2015; 17:1806-9. [DOI: 10.1021/acs.orglett.5b00624] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shugo Tsuda
- Peptide Institute, Inc., Ibaraki, Osaka 567-0085, Japan
| | - Taku Yoshiya
- Peptide Institute, Inc., Ibaraki, Osaka 567-0085, Japan
| | | | - Yuji Nishiuchi
- Peptide Institute, Inc., Ibaraki, Osaka 567-0085, Japan
- Graduate
School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
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11
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Cowper B, Sze TM, Premdjee B, Bongat White AF, Hacking A, Macmillan D. Examination of mercaptobenzyl sulfonates as catalysts for native chemical ligation: application to the assembly of a glycosylated Glucagon-Like Peptide 1 (GLP-1) analogue. Chem Commun (Camb) 2015; 51:3208-10. [DOI: 10.1039/c4cc09502b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
3/4-Mercaptobenzyl sulfonates were investigated as aryl thiol catalysts for native chemical ligation (NCL).
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Affiliation(s)
- Ben Cowper
- Department of Chemistry
- University College London
- London
- UK
| | - Tsz Mei Sze
- Department of Chemistry
- University College London
- London
- UK
| | | | | | - Andrew Hacking
- Dextra Laboratories Ltd
- Science and Technology Centre
- Earley Gate
- Reading
- UK
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12
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van de Langemheen H, Quarles van Ufford H(LC, Kruijtzer JAW, Liskamp RMJ. Efficient Synthesis of Protein Mimics by Sequential Native Chemical Ligation. Org Lett 2014; 16:2138-41. [DOI: 10.1021/ol500604h] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Helmus van de Langemheen
- Medicinal Chemistry & Chemical Biology, Utrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutical Sciences, Faculty of Sciences, Utrecht University, P.O. Box 80082, 3508 TB, Utrecht, The Netherlands
| | - H. (Linda) C. Quarles van Ufford
- Medicinal Chemistry & Chemical Biology, Utrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutical Sciences, Faculty of Sciences, Utrecht University, P.O. Box 80082, 3508 TB, Utrecht, The Netherlands
| | - John A. W. Kruijtzer
- Medicinal Chemistry & Chemical Biology, Utrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutical Sciences, Faculty of Sciences, Utrecht University, P.O. Box 80082, 3508 TB, Utrecht, The Netherlands
| | - Rob M. J. Liskamp
- Medicinal Chemistry & Chemical Biology, Utrecht Institute for Pharmaceutical Sciences, Department of Pharmaceutical Sciences, Faculty of Sciences, Utrecht University, P.O. Box 80082, 3508 TB, Utrecht, The Netherlands
- School
of Chemistry, Joseph Black Building, University of Glasgow, University
Avenue, Glasgow, G12 8QQ, United Kingdom
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13
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van de Langemheen H, van Hoeke M, Quarles van Ufford HC, Kruijtzer JAW, Liskamp RMJ. Scaffolded multiple cyclic peptide libraries for protein mimics by native chemical ligation. Org Biomol Chem 2014; 12:4471-8. [DOI: 10.1039/c4ob00190g] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The accessibility to collections, libraries and arrays of cyclic peptides is increasingly important since cyclic peptides may provide better mimics of the loop-like structures ubiquitously present in and – especially – on the surface of proteins.
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Affiliation(s)
- H. van de Langemheen
- Medicinal Chemistry & Chemical Biology
- Utrecht Institute for Pharmaceutical Sciences
- Department of Pharmaceutical Sciences
- Faculty of Sciences
- Utrecht University
| | - M. van Hoeke
- Medicinal Chemistry & Chemical Biology
- Utrecht Institute for Pharmaceutical Sciences
- Department of Pharmaceutical Sciences
- Faculty of Sciences
- Utrecht University
| | - H. C. Quarles van Ufford
- Medicinal Chemistry & Chemical Biology
- Utrecht Institute for Pharmaceutical Sciences
- Department of Pharmaceutical Sciences
- Faculty of Sciences
- Utrecht University
| | - J. A. W. Kruijtzer
- Medicinal Chemistry & Chemical Biology
- Utrecht Institute for Pharmaceutical Sciences
- Department of Pharmaceutical Sciences
- Faculty of Sciences
- Utrecht University
| | - R. M. J. Liskamp
- Medicinal Chemistry & Chemical Biology
- Utrecht Institute for Pharmaceutical Sciences
- Department of Pharmaceutical Sciences
- Faculty of Sciences
- Utrecht University
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