1
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Müllerová M, Hovorková M, Závodná T, Červenková Št́astná L, Krupková A, Hamala V, Nováková K, Topinka J, Bojarová P, Strašák T. Lactose-Functionalized Carbosilane Glycodendrimers Are Highly Potent Multivalent Ligands for Galectin-9 Binding: Increased Glycan Affinity to Galectins Correlates with Aggregation Behavior. Biomacromolecules 2023; 24:4705-4717. [PMID: 37680126 PMCID: PMC10646984 DOI: 10.1021/acs.biomac.3c00426] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 08/25/2023] [Indexed: 09/09/2023]
Abstract
Galectins, the glycan binding proteins, and their respective carbohydrate ligands represent a unique fundamental regulatory network modulating a plethora of biological processes. The advances in galectin-targeted therapy must be based on a deep understanding of the mechanism of ligand-protein recognition. Carbosilane dendrimers, the well-defined and finely tunable nanoscaffolds with low toxicity, are promising for multivalent carbohydrate ligand presentation to target galectin receptors. The study discloses a synthetic method for two types of lactose-functionalized carbosilane glycodendrimers (Lac-CS-DDMs). Furthermore, we report their outstanding, dendritic effect-driven affinity to tandem-type galectins, especially Gal-9. In the enzyme-linked immunosorbent assay, the affinity of the third-generation multivalent dendritic ligand bearing 32 lactose units to Gal-9 reached nanomolar values (IC50 = 970 nM), being a 1400-fold more effective inhibitor than monovalent lactose for this protein. This demonstrates a game-changing impact of multivalent presentation on the inhibitory effect of a ligand as simple as lactose. Moreover, using DLS hydrodynamic diameter measurements, we correlated the increased affinity of the glycodendrimer ligands to Gal-3 and Gal-8 but especially to Gal-9 with the formation of relatively uniform and stable galectin/Lac-CS-DDM aggregates.
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Affiliation(s)
- Monika Müllerová
- Institute
of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic
| | - Michaela Hovorková
- Institute
of Microbiology, Czech Academy of Sciences, Vídeňská 1083, 142 00 Prague, Czech Republic
- Department
of Genetics and Microbiology, Faculty of Science, Charles University, Viničná 5, 128 43 Prague 2, Czech Republic
| | - Táňa Závodná
- Institute
of Experimental Medicine, Czech Academy of Sciences, Vídeňská 1083, 142 00 Prague, Czech Republic
| | - Lucie Červenková Št́astná
- Institute
of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic
| | - Alena Krupková
- Institute
of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic
| | - Vojtěch Hamala
- Institute
of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic
| | - Kateřina Nováková
- Institute
of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic
| | - Jan Topinka
- Institute
of Experimental Medicine, Czech Academy of Sciences, Vídeňská 1083, 142 00 Prague, Czech Republic
| | - Pavla Bojarová
- Institute
of Microbiology, Czech Academy of Sciences, Vídeňská 1083, 142 00 Prague, Czech Republic
| | - Tomáš Strašák
- Institute
of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic
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2
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Mieriņa I, Peipiņa E, Aišpure K, Jure M. 1st generation dendrimeric antioxidants containing Meldrum's acid moieties as surface groups. NEW J CHEM 2022. [DOI: 10.1039/d1nj03830c] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The first small branched architectures decorated with 1,3-dioxane-4,6-dione moieties containing dendrons are synthesized and their antiradical properties are demonstrated.
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Affiliation(s)
- Inese Mieriņa
- Institute of Technology of Organic Chemistry, Faculty of Materials Science and Applied Chemistry, Riga Technical University, Paula Valdena Str. 3/7, Riga, LV 1048, Latvia
| | - Elīna Peipiņa
- Institute of Technology of Organic Chemistry, Faculty of Materials Science and Applied Chemistry, Riga Technical University, Paula Valdena Str. 3/7, Riga, LV 1048, Latvia
| | - Klaudija Aišpure
- Institute of Technology of Organic Chemistry, Faculty of Materials Science and Applied Chemistry, Riga Technical University, Paula Valdena Str. 3/7, Riga, LV 1048, Latvia
| | - Māra Jure
- Institute of Technology of Organic Chemistry, Faculty of Materials Science and Applied Chemistry, Riga Technical University, Paula Valdena Str. 3/7, Riga, LV 1048, Latvia
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3
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Electronic (donating or withdrawing) effects of ortho-phenolic substituents in dendritic antioxidants. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.151607] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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4
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Li YX, Zhu JP, Zhang ZJ, Qu YS. Preparation of Syringaldehyde from Lignin by Catalytic Oxidation of Perovskite-Type Oxides. ACS OMEGA 2020; 5:2107-2113. [PMID: 32064371 PMCID: PMC7016912 DOI: 10.1021/acsomega.9b02379] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2019] [Accepted: 01/16/2020] [Indexed: 05/08/2023]
Abstract
The influence of different reaction conditions on the yield of syringaldehyde was studied by using perovskite oxide as the catalyst. The optimal reaction conditions are as follows: 0.60 g of dealkali lignin, 0.60 g of 5 wt % theta ring-loaded LaFe0.2Cu0.8O3 catalyst, 30 mL of 1.0 mol/L NaOH solution, 160 °C reaction temperature, 0.80 MPa O2 pressure, and 2.5 h reaction time. Under these conditions, the highest syringaldehyde yield was 10.00%. The recycling performance of the catalyst was studied. It was found by XRD analysis that the catalyst maintained high catalytic activity after four times of use.
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Affiliation(s)
- Ying-xia Li
- Beijing
University of Chemical Technology, Beijing 100029, China
| | - Jun-peng Zhu
- Beijing
University of Chemical Technology, Beijing 100029, China
- State
Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China
| | - Zhong-jun Zhang
- Beijing
University of Chemical Technology, Beijing 100029, China
- State
Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China
| | - Yong-Shui Qu
- State
Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China
- E-mail: . Tel/Fax: +86 10 82544852
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5
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Dzhardimalieva GI, Uflyand IE. Synthetic Methodologies for Chelating Polymer Ligands: Recent Advances and Future Development. ChemistrySelect 2018. [DOI: 10.1002/slct.201802516] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Gulzhian I. Dzhardimalieva
- Laboratory of MetallopolymersThe Institute of Problems of Chemical Physics RAS Academician Semenov avenue 1, Chernogolovka, Moscow Region 142432 Russian Federation
| | - Igor E. Uflyand
- Department of ChemistrySouthern Federal University B. Sadovaya str. 105/42, Rostov-on-Don 344006 Russian Federation
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6
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Tetramer as efficient structural mode for organizing antioxidative carboxylic acids: The case in inhibiting DNA oxidation. Arch Biochem Biophys 2017; 631:1-10. [DOI: 10.1016/j.abb.2017.08.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Revised: 07/27/2017] [Accepted: 08/03/2017] [Indexed: 01/12/2023]
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7
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Le Fer G, Le Cœur C, Guigner JM, Amiel C, Volet G. Biocompatible Soft Nanoparticles with Multiple Morphologies Obtained from Nanoprecipitation of Amphiphilic Graft Copolymers in a Backbone-Selective Solvent. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017; 33:2849-2860. [PMID: 28248524 DOI: 10.1021/acs.langmuir.7b00471] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Stealth nanocarriers are a promising technology for the treatment of diseases. However, the preparation and characterization of well-defined soft nanoparticulate systems remain challenging. Here we describe a platform of amphiphilic graft copolymers leading to nanoparticles with multiple morphologies and the role of the hydrophilic backbone in their interaction with a model protein. The amphiphilic graft copolymers platform was composed of hydrophilic backbone poly(2-methyl-2-oxazoline-co-2-pentyl-2-oxazoline) (P(MeOx-co-PentOx)), prepared via cationic ring-opening polymerization. Hydrophobic poly(d,l-lactide) (PLA) chains were grafted on the backbone via Huisgen 1,3-dipolar cycloaddition. The "click" copper-catalyzed cycloaddition reactions of azides with alkynes (CuAAC) were successfully carried out, and a series of amphiphilic copolymers were prepared containing a backbone with a number-average molecular weight of 14.2 × 103 g mol-1 and different hydrophobic PLA grafts with various molecular weights (2.8 × 103-12.4 × 103 g mol-1). These original architectures of copolymers, when nanoprecipitated in water, the backbone-selective solvent, allowed us to obtain various structures of nanoparticles with a hydrodynamic diameter in the range of 65-99 nm. More interestingly, a plurality of morphologies going from unilamellar, multilamellar, and large compound vesicles to core-shell nanoparticles and depending on the PLA molecular weights were evidenced by combining cryo-transmission electron microscopy (cryo-TEM) and small-angle neutron scattering (SANS) studies. A first evaluation of their stealthiness by studying the stability and the interaction of these nano-objects with a model protein revealed the role played by the P(MeOx-co-PentOx) in these interactions, demonstrating the utility of this amphiphilic graft copolymers platform with well-defined architectures for the design of nanocarriers in drug delivery applications.
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Affiliation(s)
- Gaëlle Le Fer
- Université Paris Est , ICMPE (UMR7182), CNRS, UPEC, 94320 Thiais, France
| | - Clémence Le Cœur
- Université Paris Est , ICMPE (UMR7182), CNRS, UPEC, 94320 Thiais, France
- Laboratoire Léon Brillouin, UMR 12 CEA-CNRS, CEA Saclay , 91191 Gif-sur-Yvette Cedex, France
| | - Jean-Michel Guigner
- Institut de Minéralogie, de Physique des Matériaux et de Cosmochimie (IMPMC), Sorbonne Universités , UPMC Paris 6, IRD, CNRS UMR7590, MNHN, 4 place Jussieu, 75252 Paris Cedex 05, France
| | - Catherine Amiel
- Université Paris Est , ICMPE (UMR7182), CNRS, UPEC, 94320 Thiais, France
| | - Gisèle Volet
- Université Paris Est , ICMPE (UMR7182), CNRS, UPEC, 94320 Thiais, France
- Université d'Evry Val d'Essonne , Rue du Père Jarlan, 91025 Evry Cedex, France
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8
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Uysal N, Acik G, Tasdelen MA. Soybean oil based thermoset networks via photoinduced CuAAC click chemistry. POLYM INT 2017. [DOI: 10.1002/pi.5346] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Naci Uysal
- Department of Polymer Engineering, Faculty of Engineering; Yalova University; Yalova Turkey
| | - Gokhan Acik
- Department of Polymer Engineering, Faculty of Engineering; Yalova University; Yalova Turkey
- Department of Chemistry, Faculty of Sciences and Letters; Piri Reis University; Tuzla Istanbul Turkey
| | - Mehmet Atilla Tasdelen
- Department of Polymer Engineering, Faculty of Engineering; Yalova University; Yalova Turkey
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9
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10
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Wicker AC, Leibfarth FA, Jamison TF. Flow-IEG enables programmable thermodynamic properties in sequence-defined unimolecular macromolecules. Polym Chem 2017. [DOI: 10.1039/c7py01204g] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Improvements to the semi-automated synthesis of monodisperse oligomers using continuous flow chemistry enables structure–property studies on libraries of these valuable intermediates.
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Affiliation(s)
- Amanda C. Wicker
- Department of Chemistry
- Massachusetts Institute of Technology
- Cambridge
- USA
| | - Frank A. Leibfarth
- University of North Carolina at Chapel Hill
- Department of Chemistry
- Chapel Hill
- USA
| | - Timothy F. Jamison
- Department of Chemistry
- Massachusetts Institute of Technology
- Cambridge
- USA
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11
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Wang C, Ikhlef D, Kahlal S, Saillard JY, Astruc D. Metal-catalyzed azide-alkyne “click” reactions: Mechanistic overview and recent trends. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2016.02.010] [Citation(s) in RCA: 219] [Impact Index Per Article: 27.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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12
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Mencia G, del Olmo NS, Muñoz-Moreno L, Maroto-Diaz M, Gomez R, Ortega P, José Carmena M, Javier de la Mata F. Polyphenolic carbosilane dendrimers as anticancer agents against prostate cancer. NEW J CHEM 2016. [DOI: 10.1039/c6nj02545e] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Polyphenolic carbosilane dendrimers improved the antioxidant and anticancer properties of free vanillin.
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Affiliation(s)
- Gabriel Mencia
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá
- Campus Universitario
- Edificio de Farmacia
- E-28871 Alcalá de Henares
- Spain
| | - Natalia Sanz del Olmo
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá
- Campus Universitario
- Edificio de Farmacia
- E-28871 Alcalá de Henares
- Spain
| | - Laura Muñoz-Moreno
- Departamento de Biología de Sistemas, Universidad de Alcalá
- Campus Universitario
- E-28871 Alcalá de Henares
- Spain
| | - Marta Maroto-Diaz
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá
- Campus Universitario
- Edificio de Farmacia
- E-28871 Alcalá de Henares
- Spain
| | - Rafael Gomez
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá
- Campus Universitario
- Edificio de Farmacia
- E-28871 Alcalá de Henares
- Spain
| | - Paula Ortega
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá
- Campus Universitario
- Edificio de Farmacia
- E-28871 Alcalá de Henares
- Spain
| | - Ma José Carmena
- Departamento de Biología de Sistemas, Universidad de Alcalá
- Campus Universitario
- E-28871 Alcalá de Henares
- Spain
| | - F. Javier de la Mata
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá
- Campus Universitario
- Edificio de Farmacia
- E-28871 Alcalá de Henares
- Spain
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13
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Arslan I, Tasdelen MA. POSS-based hybrid thermosets via photoinduced copper-catalyzed azide–alkyne cycloaddition click chemistry. Des Monomers Polym 2015. [DOI: 10.1080/15685551.2015.1124323] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Affiliation(s)
- Irem Arslan
- Faculty of Engineering, Department of Polymer Engineering, Yalova University, Yalova, Turkey
| | - Mehmet Atilla Tasdelen
- Faculty of Engineering, Department of Polymer Engineering, Yalova University, Yalova, Turkey
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14
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Haldón E, Nicasio MC, Pérez PJ. Copper-catalysed azide-alkyne cycloadditions (CuAAC): an update. Org Biomol Chem 2015; 13:9528-50. [PMID: 26284434 DOI: 10.1039/c5ob01457c] [Citation(s) in RCA: 363] [Impact Index Per Article: 40.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The reactions of organic azides and alkynes catalysed by copper species represent the prototypical examples of click chemistry. The so-called CuAAC reaction (copper-catalysed azide-alkyne cycloaddition), discovered in 2002, has been expanded since then to become an excellent tool in organic synthesis. In this contribution the recent results described in the literature since 2010 are reviewed, classified according to the nature of the catalyst precursor: copper(I) or copper(II) salts or complexes, metallic or nano-particulated copper and several solid-supported copper systems.
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Affiliation(s)
- Estela Haldón
- Laboratorio de Catálisis Homogénea, Unidad Asociada al CSIC, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Química y Ciencias de los Materiales, Campus de El Carmen s/n, Universidad de Huelva, 21007-Huelva, Spain.
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15
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Cimarelli C, Di Nicola M, Diomedi S, Giovannini R, Hamprecht D, Properzi R, Sorana F, Marcantoni E. An efficient one-pot two catalyst system in the construction of 2-substituted benzimidazoles: synthesis of benzimidazo[1,2-c]quinazolines. Org Biomol Chem 2015; 13:11687-95. [PMID: 26477673 DOI: 10.1039/c5ob01777g] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
The benzimidazole core is a common moiety in a large number of natural products and pharmacologically active small molecules. The synthesis of novel benzimidazole derivatives remains a main focus in medicinal research. In continuation of the efforts towards Ce(III) catalysts for organic transformations, we observed for the first time the activity of the iodide ion and copper cation in activating CeCl3·7H2O in the selective formation of prototypical 2-substituted benzimidazoles. The one-pot CeCl3·7H2O-CuI catalytic system procedure includes the cyclo-dehydrogenation of aniline Schiff's bases, generated in situ from the condensation of 1,2-phenylenediamine and aldehydes, followed by the oxidation with iodine, which works as a hydrogen sponge. Mild reaction conditions, good to excellent yields, and clean reactions make the procedure a useful contribution to the synthesis of biologically active fused heterocycles containing benzimidazoquinazolines.
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Affiliation(s)
- Cristina Cimarelli
- School of Science and Technology, Chemistry Division, University of Camerino, via S. Agostino 1, I-62032 Camerino (MC), Italy.
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Cummings AJ, Ravalico F, McColgan-Bannon KIS, Eguaogie O, Elliott PA, Shannon MR, Bermejo IA, Dwyer A, Maginty AB, Mack J, Vyle JS. Nucleoside azide-alkyne cycloaddition reactions under solvothermal conditions or using copper vials in a ball mill. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2015; 34:361-70. [PMID: 25874944 DOI: 10.1080/15257770.2014.1001855] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Novel nucleoside analogues containing photoswitchable moieties were prepared using 'click' cycloaddition reactions between 5'-azido-5'-deoxythymidine and mono- or bis-N-propargylamide-substituted azobenzenes. In solution, high to quantitative yields were achieved using 5 mol% Cu(I) in the presence of a stabilizing ligand. 'Click' reactions using the monopropargylamides were also effected in the absence of added cuprous salts by the application of liquid assisted grinding (LAG) in metallic copper reaction vials. Specifically, high speed vibration ball milling (HSVBM) using a 3/32″ (2.38 mm) diameter copper ball (62 mg) at 60 Hz overnight in the presence of ethyl acetate lead to complete consumption of the 5'-azido nucleoside with clean conversion to the corresponding 1,3-triazole.
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Affiliation(s)
- Andrew J Cummings
- a School of Chemistry and Chemical Engineering , Queen's University Belfast , Belfast , UK
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17
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Romero-Hernández LL, Merino-Montiel P, Montiel-Smith S, Meza-Reyes S, Vega-Báez JL, Abasolo I, Schwartz S, López Ó, Fernández-Bolaños JG. Diosgenin-based thio(seleno)ureas and triazolyl glycoconjugates as hybrid drugs. Antioxidant and antiproliferative profile. Eur J Med Chem 2015; 99:67-81. [DOI: 10.1016/j.ejmech.2015.05.018] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2015] [Revised: 04/02/2015] [Accepted: 05/11/2015] [Indexed: 01/12/2023]
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Arseneault M, Wafer C, Morin JF. Recent advances in click chemistry applied to dendrimer synthesis. Molecules 2015; 20:9263-94. [PMID: 26007183 PMCID: PMC6272213 DOI: 10.3390/molecules20059263] [Citation(s) in RCA: 95] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2015] [Accepted: 05/12/2015] [Indexed: 11/16/2022] Open
Abstract
Dendrimers are monodisperse polymers grown in a fractal manner from a central point. They are poised to become the cornerstone of nanoscale devices in several fields, ranging from biomedicine to light-harvesting. Technical difficulties in obtaining these molecules has slowed their transfer from academia to industry. In 2001, the arrival of the "click chemistry" concept gave the field a major boost. The flagship reaction, a modified Hüisgen cycloaddition, allowed researchers greater freedom in designing and building dendrimers. In the last five years, advances in click chemistry saw a wider use of other click reactions and a notable increase in the complexity of the reported structures. This review covers key developments in the click chemistry field applied to dendrimer synthesis from 2010 to 2015. Even though this is an expert review, basic notions and references have been included to help newcomers to the field.
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Affiliation(s)
- Mathieu Arseneault
- Chimie, Université Laval, 1045 avenue de la Médecine, Pavillon Alexandre-Vachon, QC G1V 0A6, Canada.
| | - Caroline Wafer
- Chimie, Université Laval, 1045 avenue de la Médecine, Pavillon Alexandre-Vachon, QC G1V 0A6, Canada.
| | - Jean-François Morin
- Chimie, Université Laval, 1045 avenue de la Médecine, Pavillon Alexandre-Vachon, QC G1V 0A6, Canada.
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Identification of Rv3852 as an Agrimophol-Binding Protein in Mycobacterium tuberculosis. PLoS One 2015; 10:e0126211. [PMID: 25978362 PMCID: PMC4433263 DOI: 10.1371/journal.pone.0126211] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2015] [Accepted: 03/31/2015] [Indexed: 01/13/2023] Open
Abstract
Mycobacterial tuberculosis (Mtb) is able to preserve its intrabacterial pH (pHIB) near neutrality in the acidic phagosomes of immunologically activated macrophages and to cause lethal pathology in immunocompetent mice. In contrast, when its ability to maintain pHIB homeostasis is genetically compromised, Mtb dies in acidic phagosomes and is attenuated in the mouse. Compounds that phenocopy the genetic disruption of Mtb’s pHIB homeostasis could serve as starting points for drug development in their own right or through identification of their targets. A previously reported screen of a natural product library identified a phloroglucinol, agrimophol, that lowered Mtb’s pHIB and killed Mtb at an acidic extrabacterial pH. Inability to identify agrimophol-resistant mutants of Mtb suggested that the compound may have more than one target. Given that polyphenolic compounds may undergo covalent reactions, we attempted an affinity-based method for target identification. The structure-activity relationship of synthetically tractable polyhydroxy diphenylmethane analogs with equivalent bioactivity informed the design of a bioactive agrimophol alkyne. After click-chemistry reaction with azido-biotin and capture on streptavidin, the biotinylated agrimophol analog pulled down the Mtb protein Rv3852, a predicted membrane protein that binds DNA in vitro. A ligand-protein interaction between agrimophol and recombinant Rv3852 was confirmed by isothermal calorimetry (ITC) and led to disruption of Rv3852’s DNA binding function. However, genetic deletion of rv3852 in Mtb did not phenocopy the effect of agrimophol on Mtb, perhaps because of redundancy of its function.
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Effect of electron donating groups on polyphenol-based antioxidant dendrimers. Biochimie 2015; 111:125-34. [PMID: 25668210 DOI: 10.1016/j.biochi.2015.02.001] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2014] [Accepted: 02/01/2015] [Indexed: 11/23/2022]
Abstract
Numerous studies have reported the beneficial effects of antioxidants in human diseases. Among their biological effects, a majority of antioxidants scavenge reactive radicals in the body, thereby reducing oxidative stress that is associated with the pathogenesis of many diseases. Antioxidant dendrimers are a new class of potent antioxidant compounds reported recently. In this study, six polyphenol-based antioxidant dendrimers with or without electron donating groups (methoxy group) were synthesized in order to elucidate the influence of electron donating groups (EDG) on their antioxidant activities. Syringaldehyde (2 ortho methoxy groups), vanillin (1 ortho methoxy group), and 4-hydroxybenzaldehyde (0 methoxy group) were derivatized with propargylamine to form building blocks for the dendrimers. All the six dendrimers contain polyether cores, which were synthesized by attaching pentaerythritol and methyl α-d-glucopyranoside to in-house prepared spacer units. To prepare generation 1 antioxidant dendrimers, microwave energy and granulated metallic copper catalyst were used to link the cores and building blocks together via alkyne-azide 1,3-cycloaddition click chemistry. These reaction conditions resulted in high yields of the target dendrimers that were free from copper contamination. Based on DPPH antioxidant assay, antioxidant dendrimers decorated with syringaldehyde and vanillin exhibited over 70- and 170-fold increase in antioxidant activity compared to syringaldehyde and vanillin, respectively. The antioxidant activity of dendrimers increased with increasing number of EDG groups. Similar results were obtained when the dendrimers were used to protect DNA and human LDL against organic carbon and nitrogen-based free radicals. In addition, the antioxidant dendrimers did not show any pro-oxidant activity on DNA in the presence of physiological amounts of copper. Although the dendrimers showed potent antioxidant activities against carbon and nitrogen free radicals, EPR and DNA protection studies revealed lack of effectiveness of these dendrimers against hydroxyl radicals. The dendrimers were not cytotoxic to CHO-K1 cells.
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Taher A, Nandi D, Islam RU, Choudhary M, Mallick K. Microwave assisted azide–alkyne cycloaddition reaction using polymer supported Cu(i) as a catalytic species: a solventless approach. RSC Adv 2015. [DOI: 10.1039/c5ra04490a] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Microwave assisted solvent less approach for azide–alkyne cycloaddition.
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Affiliation(s)
- Abu Taher
- Department of Chemistry
- University of Johannesburg
- Auckland Park 2006
- South Africa
| | - Debkumar Nandi
- Department of Chemistry
- University of Johannesburg
- Auckland Park 2006
- South Africa
| | - Rafique Ul Islam
- Department of Chemistry
- University of Johannesburg
- Auckland Park 2006
- South Africa
| | - Meenakshi Choudhary
- Department of Chemistry
- University of Johannesburg
- Auckland Park 2006
- South Africa
| | - Kaushik Mallick
- Department of Chemistry
- University of Johannesburg
- Auckland Park 2006
- South Africa
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