1
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Genov GR, Takezawa H, Hayakawa H, Fujita M. Tetradehydro-Diels-Alder Reactions of Flexible Arylalkynes via Folding Inside a Molecular Cage. J Am Chem Soc 2023; 145:17013-17017. [PMID: 37493945 DOI: 10.1021/jacs.3c06301] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/27/2023]
Abstract
The tetradehydro-Diels-Alder (TDDA) reaction is a useful transformation for the rapid assembly of polycyclic scaffolds from simple linear precursors in a single synthetic step. However, the reaction requires careful substrate design and harsh reaction conditions to overcome the inherent entropic cost for this transformation. Herein we report an efficient site-selective TDDA transformation within a self-assembled Pd6L4 cage. Despite the large size, the flexibility of the employed substrates allows for efficient encapsulation within the host cavity. The rate of thermal cyclization of the encapsulated guest was found to be greatly enhanced, and high product selectivity for an unsymmetrical substrate was observed. The efficiency of this system relies on the precise conformational control of the substrate within the confined space of the host cage.
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Affiliation(s)
- Georgi R Genov
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, Mitsui Link Lab Kashiwanoha 1, FS CREATION, 6-6-2 Kashiwanoha, Kashiwa, Chiba 277-0882, Japan
| | - Hiroki Takezawa
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, Mitsui Link Lab Kashiwanoha 1, FS CREATION, 6-6-2 Kashiwanoha, Kashiwa, Chiba 277-0882, Japan
| | - Harumi Hayakawa
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, Mitsui Link Lab Kashiwanoha 1, FS CREATION, 6-6-2 Kashiwanoha, Kashiwa, Chiba 277-0882, Japan
| | - Makoto Fujita
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, Mitsui Link Lab Kashiwanoha 1, FS CREATION, 6-6-2 Kashiwanoha, Kashiwa, Chiba 277-0882, Japan
- Division of Advanced Molecular Science, Institute for Molecular Science (IMS), 5-1 Higashiyama, Myodaiji, Okazaki, Aichi 444-8787, Japan
- Tokyo College, The University of Tokyo Institutes for Advanced Study, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan
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2
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Nechaev AA, Jagtap PR, BaŽíková E, Neumannová J, Císařová I, Matoušová E. Synthesis of fused 1,2-naphthoquinones with cytotoxic activity using a one-pot three-step reaction. Org Biomol Chem 2021; 19:3434-3440. [PMID: 33899892 DOI: 10.1039/d1ob00205h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
A method for the synthesis of fused 1,2-naphthoquinones, as analogues of biologically active natural terpene quinones, is described. The intermediate polycyclic naphthalenes were prepared by a one-pot palladium-catalysed process from simple alkynes, one of which was made from an optically pure biomass-derived levoglucosenone. The prepared methoxy-substituted naphthalenes were subsequently transformed in one step to 1,2-naphthoquinones by a trivalent-iodine-mediated oxidation. The naphthoquinone products were found to have cytotoxic properties.
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Affiliation(s)
- Anton A Nechaev
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Praha 2, Czech Republic.
| | - Pratap R Jagtap
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Praha 2, Czech Republic.
| | - Ema BaŽíková
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Praha 2, Czech Republic.
| | - Johana Neumannová
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Praha 2, Czech Republic.
| | - Ivana Císařová
- Department of Inorganic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Praha 2, Czech Republic
| | - Eliška Matoušová
- Department of Organic Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Praha 2, Czech Republic.
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3
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Ghosh P, Das J, Basak A, Kanti Mukhopadhyay S, Banerjee P. Intracellular Fluorometric Recognition of Explosive and Mutagenic Nitroaromatics by a Luminescent Phenanthrene‐Naphthalene Sulfone. ChemistrySelect 2020. [DOI: 10.1002/slct.202001295] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Pritam Ghosh
- Surface Engineering & Tribology GroupCSIR-Central Mechanical Engineering Research Institute Mahatma Gandhi Avenue, City Center Durgapur 713209, West Bengal India
| | - Joyee Das
- Organic Chemistry DivisionIndian Institute of Technology Kharagpur Kharagpur 721302 West Bengal
| | - Amit Basak
- Organic Chemistry DivisionIndian Institute of Technology Kharagpur Kharagpur 721302 West Bengal
| | | | - Priyabrata Banerjee
- Surface Engineering & Tribology GroupCSIR-Central Mechanical Engineering Research Institute Mahatma Gandhi Avenue, City Center Durgapur 713209, West Bengal India
- Academy of Scientific and Innovative Research (AcSIR)AcSIR Headquarters CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar Ghaziabad 201002 Uttar Pradesh India
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4
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Li CL, Yu ZX. Asymmetric Synthesis of Azepine-Fused Cyclobutanes from Yne-Methylenecyclopropanes Involving Cyclopropanation/C–C Cleavage/Wagner–Meerwein Rearrangement and Reaction Mechanism. J Org Chem 2019; 84:9913-9928. [DOI: 10.1021/acs.joc.9b01071] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Chen-Long Li
- Beijing National Laboratory for Molecular Sciences (BNLMS), Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry, Peking University, Beijing 100871, China
| | - Zhi-Xiang Yu
- Beijing National Laboratory for Molecular Sciences (BNLMS), Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry, Peking University, Beijing 100871, China
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5
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Ramadoss V, Alonso-Castro AJ, Campos-Xolalpa N, Solorio-Alvarado CR. Protecting-Group-Free Total Synthesis and Biological Evaluation of 3-Methylkealiiquinone and Structural Analogues. J Org Chem 2018; 83:10627-10635. [PMID: 30091606 DOI: 10.1021/acs.joc.8b01436] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The modular protecting-group-free total synthesis of 3-methylkealiiquinone, an analogue of the marine alkaloid kealiiquinone, was accomplished in seven steps. A regioselectively constructed functionalized arylbenzimidazolone moiety and dimethyl squarate were used as the only two building blocks. A thermal ring expansion via 6π-conrotatory ring closure to build the quinone fragment gave rise to the desired linear analogue of the natural compound along with a nondescribed structurally attractive angular naphtho[1,2- d]imidazole regioisomer. The IC50 values for the compounds were determined on three cancer cell lines.
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Affiliation(s)
- Velayudham Ramadoss
- Departamento de Química, División de Ciencias Naturales y Exactas , Universidad de Guanajuato , Campus Guanajuato, Cerro de la Venada S/N , 36040 Guanajuato , México
| | - Angel Josabad Alonso-Castro
- Departamento de Farmacia, División de Ciencias Naturales y Exactas , Universidad de Guanajuato , Campus Guanajuato, Noria Alta S/N , 36050 Guanajuato , México
| | - Nimsi Campos-Xolalpa
- Universidad Autónoma Metropolitana , Unidad Xochimilco , Calzada del Hueso 1100 , Coyoacan 04960 , México
| | - César R Solorio-Alvarado
- Departamento de Química, División de Ciencias Naturales y Exactas , Universidad de Guanajuato , Campus Guanajuato, Cerro de la Venada S/N , 36040 Guanajuato , México
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6
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7
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Mun HJ, Seong EY, Ahn KH, Kang EJ. Fe(II)/Fe(III)-Catalyzed Intramolecular Didehydro-Diels–Alder Reaction of Styrene-ynes. J Org Chem 2018; 83:1196-1203. [DOI: 10.1021/acs.joc.7b02672] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Hyeon Jin Mun
- Department of Applied Chemistry, Kyung Hee University, Yongin 17104, Korea
| | - Eun Young Seong
- Department of Applied Chemistry, Kyung Hee University, Yongin 17104, Korea
| | - Kwang-Hyun Ahn
- Department of Applied Chemistry, Kyung Hee University, Yongin 17104, Korea
| | - Eun Joo Kang
- Department of Applied Chemistry, Kyung Hee University, Yongin 17104, Korea
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8
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Ramadoss V, Alonso-Castro AJ, Campos-Xolalpa N, Ortiz-Alvarado R, Yahuaca-Juárez B, Solorio-Alvarado CR. Total synthesis of kealiiquinone: the regio-controlled strategy for accessing its 1-methyl-4-arylbenzimidazolone core. RSC Adv 2018; 8:30761-30776. [PMID: 35548717 PMCID: PMC9085488 DOI: 10.1039/c8ra06676k] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2018] [Accepted: 08/24/2018] [Indexed: 11/21/2022] Open
Abstract
A practical, concise and straightforward total synthesis of kealiiquinone 1, a naphtho[2,3-d]imidazole alkaloid obtained from the Micronesian marine sponge Leucetta sp. was accomplished. The squaric acid chemistry to construct the 1,4-quinoid ring and the regioselective N-methylation through a benzo[c][1,2,5]selenadiazolium heterocycle are the key features in this report. The full details of the representative approaches involving the different attempted synthetic strategies are also presented. Finally a successful total synthesis of this complex secondary metabolite is described. A practical, concise and straightforward total synthesis of kealiiquinone 1, a naphtho[2,3-d]imidazole alkaloid obtained from the Micronesian marine sponge Leucetta sp. was accomplished.![]()
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Affiliation(s)
- Velayudham Ramadoss
- Universidad de Guanajuato
- Departamento de Química
- División de Ciencias Naturales y Exactas
- Campus Guanajuato
- Guanajuato
| | - Angel J. Alonso-Castro
- Universidad de Guanajuato
- Departamento de Farmacia
- División de Ciencias Naturales y Exactas
- Guanajuato
- Mexico
| | | | - Rafael Ortiz-Alvarado
- Universidad Michoacana de San Nicolás de Hidalgo
- Facultad de Químico Farmacobiología
- Morelia
- Mexico
| | - Berenice Yahuaca-Juárez
- Universidad Michoacana de San Nicolás de Hidalgo
- Facultad de Químico Farmacobiología
- Morelia
- Mexico
| | - César R. Solorio-Alvarado
- Universidad de Guanajuato
- Departamento de Química
- División de Ciencias Naturales y Exactas
- Campus Guanajuato
- Guanajuato
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9
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Jana S, Anoop A. Does the Mechanism of the Garratt-Braverman Cyclization Differ with Substrates? A Computational Study on Bispropargyl Sulfones, Sulfides, Ethers, Amines, and Methanes. J Org Chem 2016; 81:7411-8. [PMID: 27464253 DOI: 10.1021/acs.joc.6b01053] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
We studied the variation in mechanism among different bispropargyl substrates-sulfone, sulfide, ether, amine, and methane-toward Garratt-Braverman (GB) cyclization using density functional theory calculations. Isomerization and cycloaddition are the key steps in the GB cyclization. To compare the reactivity among the various substrates, we computed the free energy of activation (ΔG(⧧)) for the cycloaddition and the cyclization steps, whereas we used the theoretically computed pKa values for the isomerization steps. Our results suggest that the sulfones undergo a relatively fast isomerization followed by slower cyclization, while the ethers undergo a slow isomerization followed by easy cyclization. The methanes and amines are similar to the ethers, and the sulfides showed intermediate behavior. We extended our study to unsymmetrical substrates and compare the results with experiments that suggest the isomerization to be the rate-limiting step for bispropargyl ethers, while cyclization through a diradical intermediate is crucial to the rate for the bispropargyl sulfones. On the basis of these findings, we made predictions on the selectivity of unsymmetrical bispropargyl sulfones, amines, methanes, and sulfides. This is the first detailed mechanistic study on the GB cyclization of bispropargyl substrates other than sulfones.
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Affiliation(s)
- Saibal Jana
- Department of Chemistry, Indian Institute of Technology Kharagpur , Kharagpur 721 302, India
| | - Anakuthil Anoop
- Department of Chemistry, Indian Institute of Technology Kharagpur , Kharagpur 721 302, India
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10
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Das J, Bag SS, Basak A. Mechanistic Studies on Garratt–Braverman Cyclization: The Diradical–Cycloaddition Puzzle. J Org Chem 2016; 81:4623-32. [DOI: 10.1021/acs.joc.6b00490] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Joyee Das
- Department
of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721302, India
| | - Subhendu Sekhar Bag
- Department
of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781039, India
| | - Amit Basak
- Department
of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721302, India
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11
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Bhattacharya P, Mandal SM, Basak A. Synthesis of DNA-Intercalating 6H-Benzo[c]chromen-6-one Derivatives through a Strategic Combination of Garratt-Braverman and Minisci Acyloxylation Reactions. European J Org Chem 2016. [DOI: 10.1002/ejoc.201501529] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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12
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Das J, Das E, Jana S, Addy PS, Anoop A, Basak A. Shifting the Reactivity of Bis-propargyl Ethers from Garratt–Braverman Cyclization Mode to 1,5-H Shift Pathway To Yield 3,4-Disubstituted Furans: A Combined Experimental and Computational Study. J Org Chem 2015; 81:450-7. [DOI: 10.1021/acs.joc.5b02246] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Joyee Das
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Eshani Das
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Saibal Jana
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Partha Sarathi Addy
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Anakuthil Anoop
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
| | - Amit Basak
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur 721 302, India
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13
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Gai R, Back DF, Zeni G. Potassium tert-Butoxide-Catalyzed Synthesis of Benzofuroazepines via Cyclization of (2-Alkynylbenzyl)oxy Nitriles. J Org Chem 2015; 80:10278-87. [DOI: 10.1021/acs.joc.5b01884] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Rafaela Gai
- Laboratório
de Síntese, Reatividade, Avaliação
Farmacológica e Toxicológica de Organocalcogênios and ‡Laboratório
de Materiais Inorgânicos, CCNE, UFSM, Santa Maria, Rio Grande
do Sul 97105-900, Brazil
| | - Davi F. Back
- Laboratório
de Síntese, Reatividade, Avaliação
Farmacológica e Toxicológica de Organocalcogênios and ‡Laboratório
de Materiais Inorgânicos, CCNE, UFSM, Santa Maria, Rio Grande
do Sul 97105-900, Brazil
| | - Gilson Zeni
- Laboratório
de Síntese, Reatividade, Avaliação
Farmacológica e Toxicológica de Organocalcogênios and ‡Laboratório
de Materiais Inorgânicos, CCNE, UFSM, Santa Maria, Rio Grande
do Sul 97105-900, Brazil
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14
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Grimaldi TB, Back DF, Zeni G. Synthesis of Naphthofurans bytBuOK-Catalyzed Intramolecular Anionic Cycloaddition of Unsymmetrical Bis-propargyl Ethers. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500969] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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15
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Hatial I, Das J, Ghosh AK, Basak A. Base-Induced Cyclization of Propargyl Alkenylsulfones: A High-Yielding Synthesis of 4,5-Disubstituted 2H-Thiopyran 1,1-Dioxides. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500633] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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16
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Sandtorv AH, Bjørsvik HR. Scope and Mechanistic Limitations of a Sonogashira Coupling Reaction on an Imidazole Backbone. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500520] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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17
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Ghosh D, Pal P, Basak A. Sonogashira coupling and Garratt–Braverman cyclization in tandem: formation of four C–C bonds leading to the synthesis of aryl dihydro isofurans and isoindoles. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.02.093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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18
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Ghosh M, Singha R, Dhara S, Ray JK. Synthesis of 4,5,6-trisubstituted-1,3-dihydroisobenzofurans by virtue of palladium-catalyzed domino carbopalladation of bromoenynes and internal alkynes. RSC Adv 2015. [DOI: 10.1039/c5ra16546f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
An efficient hetero-annulation protocol has been developed for the construction of 4,5,6-trisubstituted-1,3-dihydroisobenzofuransviapalladium-catalyzed domino carbopalladation of bromoenynes and internal alkynes.
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Affiliation(s)
- Munmun Ghosh
- Department of Chemistry
- Indian Institute of Technology
- Kharagpur 721302
- India
| | - Raju Singha
- Department of Chemistry
- Indian Institute of Technology
- Kharagpur 721302
- India
| | - Shubhendu Dhara
- Department of Chemistry
- Indian Institute of Technology
- Kharagpur 721302
- India
| | - Jayanta K. Ray
- Department of Chemistry
- Indian Institute of Technology
- Kharagpur 721302
- India
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19
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Bhattacharya P, Senapati K, Chattopadhyay K, Mandal SM, Basak A. Synthesis of benzochromenes and dihydrophenanthridines with helical motifs using Garratt–Braverman and Buchwald–Hartwig reactions. RSC Adv 2015. [DOI: 10.1039/c5ra12512j] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
X-ray structures of dihydrophenanthiridine (a) and benzochromene (b) showing greater helicity in (a).
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Affiliation(s)
| | - Kalyan Senapati
- Department of Chemistry
- Indian Institute of Technology
- Kharagpur 721302
- India
| | | | - Santi M. Mandal
- Central Research Facility
- Indian Institute of Technology
- Kharagpur 721302
- India
| | - Amit Basak
- Department of Chemistry
- Indian Institute of Technology
- Kharagpur 721302
- India
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20
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Mitra T, Jana S, Pandey S, Bhattacharya P, Khamrai UK, Anoop A, Basak A. Asymmetric Garratt–Braverman Cyclization: A Route to Axially Chiral Aryl Naphthalene–Amino Acid Hybrids. J Org Chem 2014; 79:5608-16. [DOI: 10.1021/jo500771g] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Tapobrata Mitra
- Department
of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
| | - Saibal Jana
- Department
of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
| | - Sharmila Pandey
- Department
of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
| | | | - Uttam K. Khamrai
- TCG Lifesciences
Ltd, Sector V, Salt Lake City, Kolkata 700091, India
| | - Anakuthil Anoop
- Department
of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
| | - Amit Basak
- Department
of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India
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