Synthesis of Crystalline Molecular Gyrotops and Phenylene Rotation inside the Cage

Design of rotational potential in a phenyltriptycene molecular rotor by exploiting CH/π-interaction between tripticil hydrogen and phenyl

The chemistry of artificial molecular rotors has recently attracted considerable attention in the field of molecular machines. Phenyltriptycene could be used as a stepwise molecular rotor because it is composed of a phenyl rotor and a triptycene stator, in which the rotational potential can be designed by introducing substituents. In this study, a novel design of the relative energies among three rotamers of a substituted phenyltriptycene by exploiting the CH/π-interaction between a peri-hydrogen and phenyl was investigated. First, the structures of two different phenyltriptycenes were compared to confirm CH/π-interactions. Second, the effects of the substituents of 1,4,5-trichloro-3',5'-dimethoxyphenyltriptycene on the relative energies were investigated by structural analysis, temperature-dependent nuclear magnetic resonance studies, and density functional theory calculations. The obtained results should facilitate the design of novel molecular switches and/or molecular rotors.

Structures and Oxidation Properties of Phenylene-Bridged Diazacycloalkanes: Ring Size Effects on Structures and Properties

Phenylenediamine derivatives have been investigated as functional molecules because of their characteristic oxidation properties. In this study, phenylene-bridged diazacycloalkanes, that is, C10, C12, and C14, in which numbers indicate the lengths of a side chain, were synthesized, and the effects of the macroring size on their structures and oxidation properties were investigated. X-ray crystallography revealed that the structures around the nitrogen atoms were remarkably dependent on the chain lengths. The benzene plane of C10 is arranged almost perpendicular to the macroring to avoid steric contact. However, the benzene plane of C14 and alkyl frame were co-planar. Stabilization resulting from conjugation was comparable to destabilization caused by macroring strain according to DFT calculations. Structural differences between C10 and C14 caused changes in the NMR chemical shifts of the inner methylene protons and first oxidation potentials in solution. Notably, the properties of C12 can be analyzed as those of distributed structures, which is of interest with respect to exploiting the metastable structure of the molecules. The observed relationships between the steric structures and properties can facilitate the design of functional molecules containing phenylenediamine moieties.

Synthesis and rotational dynamics of diazamacrocycles having bridged 1,4-naphthylene as framed molecular rotors

1,4-Naphthylene bridged diazamacrocycles were synthesized and characterized as novel framed molecular rotors, and dependence of the rotation on the frame size was investigated.

Bulky selenium ligand stabilized trans-palladium dichloride complexes as catalyst for silver-free decarboxylative coupling of coumarin-3-carboxylic acids

This report describes synthesis of three new trans -palladium dichloride complexes of bulky selenium ligands. These complexes possess a Cl-Pd-Cl rotor spoke attached to a Se-Pd-Se axle. The new ligands and palladium complexes ( C1 - C3 ) were characterized with the help of NMR, HRMS, UV-Vis., IR, and elemental analysis. The single crystal structure of metal complex C2 confirmed a square planer geometry of complex with trans -orientation. The X-ray structure revealed intramolecular secondary interactions (SeCH---Cl) between chlorine of PdCl 2 and CH 2 proton of selenium ligand. Variable temperature NMR data shows coalescence of diastereotopic protons, which indicates pyramidal inversion of selenium atom at elevated temperature. The relaxed potential energy scan of C2 suggests a rotational barrier of ~12.5 kcal/mol for rotation of chlorine atom through Cl-Pd-Cl rotor. The complex C3 possess dual intramolecular secondary interactions (OCH 2 ---Cl and SeCH 2 ---Cl) with stator ligand. Molecular rotor C2 was found to be most efficient catalyst for the decarboxylative Heck-coupling under mild reaction conditions. The protocol is applicable to a broad range of substrates with large functional group tolerance and low catalyst loading (2.5 mol %). The mechanism of decarboxylative Heck-coupling reaction was investigated through experimental and computational studies. Importantly the reaction works under silver-free conditions which reduces the cost of overall protocol. Further, the catalyst also worked for decarboxylative arylation and decarboxylative Suzuki-Miyaura coupling reactions with good yields of the coupled products.

Molecular motion of halogenated ethylammonium/[18]crown-6 supramolecular ions in nickel dithiolate magnetic crystals

Supramolecular cations, consisting of ethylammonium derivatives (X–CH₂CH₂–NH₃⁺) complexed with [18]crown-6, were incorporated into [Ni(dmit)₂]⁻ crystals in order to promote molecular motion.

Hydrogen-Bonded Crystalline Molecular Machines with Ultrafast Rotation and Displacive Phase Transitions

Two new crystalline rotors 1 and 2 assembled through N-H⋅⋅⋅N hydrogen bonds by using halogenated carbazole as stators and 1,4-diaza[2.2.2]bicyclooctane (DABCO) as the rotator, are described. The dynamic characterization through ¹ H T₁ relaxometry experiments indicate very low rotational activation barriers (E_a ) of 0.67 kcal mol^-1 for 1 and 0.26 kcal mol^-1 for 2, indicating that DABCO can reach a THz frequency at room temperature in the latter. These E_a values are supported by solid-state density functional theory computations. Interestingly, both supramolecular rotors show a phase transition between 298 and 250 K, revealed by differential scanning calorimetry and single-crystal X-ray diffraction. The subtle changes in the crystalline environment of these rotors that can alter the motion of an almost barrierless DABCO are discussed here.

A selenium-coordinated palladium(ii) trans-dichloride molecular rotor as a catalyst for site-selective annulation of 2-arylimidazo[1,2-a]pyridines

This report describes the synthesis of a new class of secondary interaction (SeCHCl)-controlled molecular rotor having a Cl-Pd-Cl rotor spoke attached onto a Se-Pd-Se axle. NMR data acquired at various temperatures established ΔG/ΔG values of 15.5 and 17.2 kcal mol^-1 for a roughly 4.5 Å-long rotor. The molecular rotor showed excellent catalytic activity with reverse regioselectivity for annulation of 2-arylimidazo[1,2-a]pyridines (yields: ∼53-78%) with only 1.5 mol% catalyst loading.

Organic Cages as Building Blocks for Mechanically Interlocked Molecules: Towards Molecular Machines

The research on systems able to perform controllable motions under external stimuli arises great interest in the scientific community. Over the years, a library of innovative devices has been produced, classified in different categories according to the molecular or supramolecular level of motion. This minireview aims to highlight some representative studies, in which organic cages are used as building blocks for mechanically interlocked molecules, and in which intramolecular motions are triggered by external input. However, the application of organic cages in the construction of molecular machines is hardly achieved. A good compromise must actually be reached, between flexibility and rigidity of the cage's framework for an effective control of the intra- and/or intermolecular motion in the final mechanical device. Our final goal is to stimulate researchers' curiosity towards cage-like molecules, so that they take on the challenge of converting a cage into a molecular machine.

Kinetic Stabilization of Carbazole Nitroxides by Inclusion in a Macrocage and Their Electron Spin Resonance Characterization

Some nitroxides, for example, tetramethylpyridiniumoxide, are known as stable radicals; however, carbazole nitroxide is less stable. The kinetic stabilization of labile radicals by introduction of bulky substituents is usually effective to investigate intrinsic properties of the molecule because of small electronic perturbation induced by the substituents. In this study, macrocage molecules with a carbazole nitroxide connected by covalent bonds were newly designed as kinetically stabilized carbazole nitroxides. The nitroxides were prepared and characterized by electron spin resonance spectroscopy. The caged nitroxides presented long half-lives (∼50 h) by kinetic analysis.

Synthesis of dipolar molecular rotors as linkers for metal-organic frameworks

We report the synthesis of five dicarboxylic acid-substituted dipolar molecular rotors for the use as linker molecules in metal-organic frameworks (MOFs). The rotor molecules exhibit very low rotational barriers and decent to very high permanent, charge free dipole moments, as shown by density functional theory calculations on the isolated molecules. Four rotors are fluorescent in the visible region. The linker designs are based on push-pull-substituted phenylene cores with ethynyl spacers as rotational axes, functionalized with carboxylic acid groups for implementation in MOFs. The substituents at the phenylene core are chosen to be small to leave rotational freedom in solids with confined free volumes. The dipole moments are generated by electron-donating substituents (benzo-1,3-dioxole, benzo-1,4-dioxane, or benzo-2,1,3-thiadiazole annelation) and withdrawing substituents (difluoro, or dicyano substitution) at the opposite positions of the central phenylene core. A combination of 1,4-dioxane annelation and dicyano substitution generates a theoretically predicted, very high dipole moment of 10.1 Debye. Moreover, the molecules are sufficiently small to fit into cavities of 10 Å3. Hence, the dipolar rotors should be ideally suited as linkers in MOFs with potential applications as ferroelectric materials and for optical signal processing.

Polarized fluorescence of a crystal having uniaxially oriented molecules by a carbazole-diyl-bridged macrocage

An axially oriented π-electron system is achieved in a single crystal of a macrocage molecule, and polarized fluorescence of the single crystal was observed.

Dielectric Relaxation of Powdered Molecular Gyrotops Having a Thiophene Dioxide-diyl as a Dipolar Rotor

The dielectric properties of powdered molecular gyrotops with a thiophenedioxide-diyl are reported. Crystals without a solvent molecule show usual dielectric relaxation spectra due to orientation polarization of the dipolar rotor, while a crystal having ethanol as the crystalline solvent molecule showed novel temperature-dependent dielectric relaxation switching by crystal-to-crystal phase transition, which is induced by hydrogen-bonding interactions between thiophene dioxide and ethanol.

Non-metal-templated approaches to bis(borane) derivatives of macrocyclic dibridgehead diphosphines via alkene metathesis

Two routes to the title compounds are evaluated. First, a ca. 0.01 M CH₂Cl₂ solution of H₃B·P((CH₂)₆CH=CH₂)₃ (1·BH₃) is treated with 5 mol % of Grubbs' first generation catalyst (0 °C to reflux), followed by H₂ (5 bar) and Wilkinson's catalyst (55 °C). Column chromatography affords H₃B·P(n-C₈H₁₇)₃ (1%), H₃B·P((CH₂)₁₃CH₂)(n-C₈H₁₇) (8%; see text for tie bars that indicate additional phosphorus–carbon linkages, which are coded in the abstract with italics), H₃B·P((CH₂)₁₃CH₂)((CH₂)₁₄)P((CH₂)₁₃CH₂)·BH₃ (6·2BH₃, 10%), in,out-H₃B·P((CH₂)₁₄)₃P·BH₃ (in,out-2·2BH₃, 4%) and the stereoisomer (in,in/out,out)-2·2BH₃ (2%). Four of these structures are verified by independent syntheses. Second, 1,14-tetradecanedioic acid is converted (reduction, bromination, Arbuzov reaction, LiAlH₄) to H₂P((CH₂)₁₄)PH₂ (10; 76% overall yield). The reaction with H₃B·SMe₂ gives 10·2BH₃, which is treated with n-BuLi (4.4 equiv) and Br(CH₂)₆CH=CH₂ (4.0 equiv) to afford the tetraalkenyl precursor (H₂C=CH(CH₂)₆)₂(H₃B)P((CH₂)₁₄)P(BH₃)((CH₂)₆CH=CH₂)₂ (11·2BH₃; 18%). Alternative approaches to 11·2BH₃ (e.g., via 11) were unsuccessful. An analogous metathesis/hydrogenation/chromatography sequence with 11·2BH₃ (0.0010 M in CH₂Cl₂) gives 6·2BH₃ (5%), in,out-2·2BH₃ (6%), and (in,in/out,out)-2·2BH₃ (7%). Despite the doubled yield of 2·2BH₃, the longer synthesis of 11·2BH₃ vs 1·BH₃ renders the two routes a toss-up; neither compares favorably with precious metal templated syntheses.

Exploiting rotational motion in molecular crystals

Rotational motion within molecular crystals is a prototypical concept to build future functional materials and solid-state molecular machines.

Ultra-Fast Molecular Rotors within Porous Organic Cages

Using variable temperature 2 H static NMR spectra and 13 C spin-lattice relaxation times (T1 ), we show that two different porous organic cages with tubular architectures are ultra-fast molecular rotors. The central para-phenylene rings that frame the "windows" to the cage voids display very rapid rotational rates of the order of 1.2-8×106  Hz at 230 K with low activation energy barriers in the 12-18 kJ mol-1 range. These cages act as hosts to iodine guest molecules, which dramatically slows down the rotational rates of the phenylene groups (5-10×104  Hz at 230 K), demonstrating potential use in applications that require molecular capture and release.

A crystalline molecular gyrotop with a biphenylene dirotor and its temperature-dependent birefringence

A crystalline molecular gyrotop with a biphenylene dirotor showed a reduction in the birefringence with increasing temperature.

Gyroscope like molecules consisting of trigonal or square planar osmium rotators within three-spoked dibridgehead diphosphine stators: syntheses, substitution reactions, structures, and dynamic properties

The OsL_y moieties of the title complexes undergo rapid rotation within the diphosphine cages when L is restricted to Cl, Br, CO, H, and Me.

Synthesis, reactivity, structures, and dynamic properties of gyroscope like iron complexes with dibridgehead diphosphine cages: pre- vs. post-metathesis substitutions as routes to adducts with neutral dipolar Fe(CO)(NO)(X) rotors

Substitution reactions of 4c⁺ BF₄⁻ afford the title complexes 9c-X, the Fe(CO)(NO)(X) moieties of which rapidly rotate within the diphosphine cage. Trends are interpreted in terms of horizontal/vertical van der Waals clearance.

A pyrene-bridged macrocage showing no excimer fluorescence

A pyrene bridged macrocage shows fluorescence from a monomeric excited state without excimer due to cage effects.

A crystalline molecular gyrotop with germanium junctions between a phenylene rotor and alkyl spokes

A molecular gyrotop with germanium junctions was synthesized, and the dynamics of the phenylene and the optical properties were discussed.