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Wu P, Givskov M, Nielsen TE. Reactivity and Synthetic Applications of Multicomponent Petasis Reactions. Chem Rev 2019; 119:11245-11290. [PMID: 31454230 PMCID: PMC6813545 DOI: 10.1021/acs.chemrev.9b00214] [Citation(s) in RCA: 125] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Indexed: 02/06/2023]
Abstract
The Petasis boron-Mannich reaction, simply referred to as the Petasis reaction, is a powerful multicomponent coupling reaction of a boronic acid, an amine, and a carbonyl derivative. Highly functionalized amines with multiple stereogenic centers can be efficiently accessed via the Petasis reaction with high levels of both diastereoselectivity and enantioselectivity. By drawing attention to examples reported in the past 8 years, this Review demonstrates the breadth of the reactivity and synthetic applications of Petasis reactions in several frontiers: the expansion of the substrate scope in the classic three-component process; nonclassic Petasis reactions with additional components; Petasis-type reactions with noncanonical substrates, mechanism, and products; new asymmetric versions assisted by chiral catalysts; combinations with a secondary or tertiary transformation in a cascade- or sequence-specific manner to access structurally complex, natural-product-like heterocycles; and the synthesis of polyhydroxy alkaloids and biologically interesting molecules.
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Affiliation(s)
- Peng Wu
- Chemical
Genomics Center of the Max Planck Society, Dortmund 44227, Germany
- Department
of Chemical Biology, Max Planck Institute
of Molecular Physiology, Dortmund 44227, Germany
- Chemical
Biology and Therapeutics Science, Broad
Institute of MIT and Harvard, Cambridge, Massachusetts 02142, United States
- Department
of Medicine and Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts 02115, United States
- Department
of Chemistry, Massachusetts Institute of
Technology, Cambridge, Massachusetts 02139, United States
- Department
of Drug Design and Pharmacology, University
of Copenhagen, Copenhagen DK-2100, Denmark
| | - Michael Givskov
- Costerton
Biofilm Center, Department of Immunology and Microbiology, University of Copenhagen, Copenhagen DK-2200, Denmark
- Singapore
Centre for Environmental Life Sciences Engineering, Nanyang Technological University, Singapore 637551, Singapore
| | - Thomas E. Nielsen
- Costerton
Biofilm Center, Department of Immunology and Microbiology, University of Copenhagen, Copenhagen DK-2200, Denmark
- Singapore
Centre for Environmental Life Sciences Engineering, Nanyang Technological University, Singapore 637551, Singapore
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2
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α-Amino Acids as Synthons in the Ugi-5-Centers-4-Components Reaction: Chemistry and Applications. Symmetry (Basel) 2019. [DOI: 10.3390/sym11060798] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Abstract
Since the first reports, the Ugi four-component reaction (U-4CR) has been recognized as a keystone transformation enabling the synthesis of peptide mimetics in a single step and with high atom economy. In recent decades, the U-4CR has been a source of inspiration for many chemists fascinated by the possibility of identifying new efficient organic reactions by simply changing one of the components or by coupling in tandem the multicomponent process with a huge variety of organic transformations. Herein we review the synthetic potentialities, the boundaries, and the applications of the U-4CR involving α-amino acids, where the presence of two functional groups—the amino and the carboxylic acids—allowed a 5-center 4-component Ugi-like reaction, a powerful tool to gain access to drug-like multi-functionalized scaffolds.
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3
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Stereoselective Multicomponent Reactions in the Synthesis or Transformations of Epoxides and Aziridines. Molecules 2019; 24:molecules24030630. [PMID: 30754666 PMCID: PMC6384726 DOI: 10.3390/molecules24030630] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Revised: 02/04/2019] [Accepted: 02/07/2019] [Indexed: 01/14/2023] Open
Abstract
Small ring heterocycles, such as epoxides and aziridines, are present in several natural products and are also highly versatile building blocks, frequently involved in the synthesis of numerous bioactive products and pharmaceuticals. Because of the potential for increased efficiency and selectivity, along with the advantages of environmentally benign synthetic procedures, multicomponent reactions (MCRs) have been explored in the synthesis and ring opening of these heterocyclic units. In this review, the recent advances in MCRs involving the synthesis and applications of epoxides and aziridines to the preparation of other heterocycles are discussed emphasizing the stereoselectivity of the reactions.
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4
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Amino-β-lactams in Ugi reaction: An efficient method for preparation of functionalized peptidomimetics. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.11.028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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5
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Solid-phase synthesis, cyclization, and site-specific functionalization of aziridine-containing tetrapeptides. Nat Protoc 2017; 12:1277-1287. [PMID: 28538738 DOI: 10.1038/nprot.2017.035] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Cyclic tetrapeptides comprise a potent and selective class of molecules with a wide range of biological activities, including the phytotoxic activity of tentoxin and the histone deacetylase (HDAC) inhibitory effects of chlamydocin. The incorporation of a functional aziridine group within cyclic peptides enables their conformational control and allows for late-stage and site-selective functionalization of these molecules, thereby creating the potential for covalent protein labeling. This protocol describes the solid-phase synthesis, cyclization, and site-specific structural modification of aziridine-containing tetrapeptides. The linear precursors are assembled by solid-phase peptide synthesis using Fmoc-protected amino acid building blocks, followed by head-to-tail peptide cyclization. Cyclization is performed using a slow reverse-addition method that prevents the formation of undesired higher-order cyclo-oligomeric side products. Site-specific structural modification of the resulting macrocycles is described using sodium azide or thiophenol as representative examples. It requires ∼4 d to prepare peptide macrocycles from their respective Fmoc-protected amino acid starting materials, an improvement upon the 3 weeks required for conventional solution-phase methods. This protocol also addresses important considerations regarding the handling of these compounds, whose electrophilic aziridine functionalities can otherwise be prone to undesired side reactions. With recent developments in aziridine-containing macrocyclic peptide synthesis and the potential for covalent protein labeling, these scaffolds represent a valuable addition to many screening libraries, and we expect that access to these macrocycles will facilitate efforts in drug discovery and molecular probe development.
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6
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Xie YB, Ye SP, Chen WF, Hu YL, Li DJ, Wang L. Brønsted-Acid-Catalyzed Multicomponent One-Pot Reaction: Efficient Synthesis of Polysubstituted 1,2-Dihydropyridines. ASIAN J ORG CHEM 2017. [DOI: 10.1002/ajoc.201700127] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yi-Bi Xie
- Key laboratory of inorganic nonmetallic crystalline and energy conversion materials; College of Materials and Chemical Engineering; China Three Gorges University; Yichang Hubei 443002 China
| | - Si-Pei Ye
- Key laboratory of inorganic nonmetallic crystalline and energy conversion materials; College of Materials and Chemical Engineering; China Three Gorges University; Yichang Hubei 443002 China
| | - Wei-Feng Chen
- Key laboratory of inorganic nonmetallic crystalline and energy conversion materials; College of Materials and Chemical Engineering; China Three Gorges University; Yichang Hubei 443002 China
| | - Yu-Lin Hu
- Key laboratory of inorganic nonmetallic crystalline and energy conversion materials; College of Materials and Chemical Engineering; China Three Gorges University; Yichang Hubei 443002 China
| | - De-Jiang Li
- Key laboratory of inorganic nonmetallic crystalline and energy conversion materials; College of Materials and Chemical Engineering; China Three Gorges University; Yichang Hubei 443002 China
| | - Long Wang
- Key laboratory of inorganic nonmetallic crystalline and energy conversion materials; College of Materials and Chemical Engineering; China Three Gorges University; Yichang Hubei 443002 China
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7
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Neochoritis CG, Livadiotou D, Tsiaras V, Zarganes-Tzitzikas T, Samatidou E. The indoleacetic acids in IMCRs: a three-component Ugi reaction involving TosMIC. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.07.013] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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8
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Heine NB, Kaldas SJ, Belding L, Shmatova O, Dudding T, Nenajdenko VG, Studer A, Yudin AK. Synthesis of Chiral Piperazinones Using Amphoteric Aziridine Aldehyde Dimers and Functionalized Isocyanides. J Org Chem 2016; 81:5209-16. [PMID: 27156711 DOI: 10.1021/acs.joc.6b00471] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We have evaluated a range of functionalized isocyanides in the aziridine aldehyde-driven multicomponent synthesis of piperazinones. High diasteroselectivity for each isocyanide was observed. A theoretical evaluation of the reaction course corroborates the experimental data. Moreover, the reactivity of cis- and trans-configured aziridine aldehyde dimers has been compared. This study further probes the dimer-driven mechanism of cyclization and enables an efficient access to a wide range of chiral piperazinones bearing functionalized side chains.
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Affiliation(s)
- Niklas B Heine
- Organic Chemistry Institute, Westfälische Wilhelms-Universität , Corrensstraße 40, 48149 Münster, Germany
| | - Sherif J Kaldas
- Davenport Research Laboratories, Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6 Canada
| | - Lee Belding
- Brock University , St. Catharines, Ontario L2S 3A1, Canada
| | - Olga Shmatova
- Department of Chemistry, Lomonosov Moscow State University , 119899 Moscow, Russia
| | - Travis Dudding
- Brock University , St. Catharines, Ontario L2S 3A1, Canada
| | | | - Armido Studer
- Organic Chemistry Institute, Westfälische Wilhelms-Universität , Corrensstraße 40, 48149 Münster, Germany
| | - Andrei K Yudin
- Davenport Research Laboratories, Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6 Canada
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9
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Wehlan H, Oehme J, Schäfer A, Rossen K. Development of Scalable Conditions for the Ugi Reaction—Application to the Synthesis of (R)-Lacosamide. Org Process Res Dev 2015. [DOI: 10.1021/acs.oprd.5b00228] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hermut Wehlan
- Chemical and Biological Development, Sanofi, Industriepark Hoechst, D-65926 Frankfurt, Germany
| | - Jan Oehme
- Chemical and Biological Development, Sanofi, Industriepark Hoechst, D-65926 Frankfurt, Germany
| | - Alexander Schäfer
- Chemical and Biological Development, Sanofi, Industriepark Hoechst, D-65926 Frankfurt, Germany
| | - Kai Rossen
- Chemical and Biological Development, Sanofi, Industriepark Hoechst, D-65926 Frankfurt, Germany
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10
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Zaretsky S, Hickey JL, Tan J, Pichugin D, St Denis MA, Ler S, Chung BKW, Scully CCG, Yudin AK. Mechanistic investigation of aziridine aldehyde-driven peptide macrocyclization: the imidoanhydride pathway. Chem Sci 2015; 6:5446-5455. [PMID: 29861887 PMCID: PMC5949604 DOI: 10.1039/c5sc01958c] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2015] [Accepted: 07/07/2015] [Indexed: 01/30/2023] Open
Abstract
Aziridine aldehydes participate in a multicomponent reaction with α-amino amides and isocyanides to generate reactive imidoanhydride intermediates.
Aziridine aldehyde dimers, peptides, and isocyanides participate in a multicomponent reaction to yield peptide macrocycles. We have investigated the selectivity and kinetics of this process and performed a detailed analysis of its chemoselectivity. While the reactants encompass all of the elements of the traditional Ugi four-component condensation, there is a significant deviation from the previously proposed mechanism. Our results provide evidence for an imidoanhydride pathway in peptide macrocyclization and lend justification for the diastereoselectivity and high effective molarity observed in the reaction.
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Affiliation(s)
- Serge Zaretsky
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada .
| | - Jennifer L Hickey
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada . .,Encycle Therapeutics Inc. , 101 College Street, Suite 314 , Toronto , Ontario M5G 1L7 , Canada
| | - Joanne Tan
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada .
| | - Dmitry Pichugin
- Center for Structural Investigations of Complex Organic Molecules and Polymers , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada
| | - Megan A St Denis
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada . .,Encycle Therapeutics Inc. , 101 College Street, Suite 314 , Toronto , Ontario M5G 1L7 , Canada
| | - Spencer Ler
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada .
| | - Benjamin K W Chung
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada .
| | - Conor C G Scully
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada .
| | - Andrei K Yudin
- Davenport Research Laboratories , Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada .
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11
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Trinchera P, Corless VB, Yudin AK. Synthesis of Previously Inaccessible Borylated Heterocycle Motifs Using Novel Boron-Containing Amphoteric Molecules. Angew Chem Int Ed Engl 2015; 54:9038-41. [DOI: 10.1002/anie.201504271] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2015] [Indexed: 01/05/2023]
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12
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Trinchera P, Corless VB, Yudin AK. Synthesis of Previously Inaccessible Borylated Heterocycle Motifs Using Novel Boron-Containing Amphoteric Molecules. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201504271] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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13
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Treder AP, Hickey JL, Tremblay MCJ, Zaretsky S, Scully CCG, Mancuso J, Doucet A, Yudin AK, Marsault E. Solid-Phase Parallel Synthesis of Functionalised Medium-to-Large Cyclic Peptidomimetics through Three-Component Coupling Driven by Aziridine Aldehyde Dimers. Chemistry 2015; 21:9249-55. [PMID: 26014974 DOI: 10.1002/chem.201500068] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2015] [Indexed: 11/06/2022]
Abstract
The first solid-phase parallel synthesis of macrocyclic peptides using three-component coupling driven by aziridine aldehyde dimers is described. The method supports the synthesis of 9- to 18-membered aziridine-containing macrocycles, which are then functionalized by nucleophilic opening of the aziridine ring. This constitutes a robust approach for the rapid parallel synthesis of macrocyclic peptides.
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Affiliation(s)
- Adam P Treder
- Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, 3001, 12e av nord Sherbrooke (QC) J1H 5N4 (Canada)
| | - Jennifer L Hickey
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 St. George Street, Toronto (ON) M5S 3H6 (Canada)
| | - Marie-Claude J Tremblay
- Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, 3001, 12e av nord Sherbrooke (QC) J1H 5N4 (Canada)
| | - Serge Zaretsky
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 St. George Street, Toronto (ON) M5S 3H6 (Canada)
| | - Conor C G Scully
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 St. George Street, Toronto (ON) M5S 3H6 (Canada)
| | - John Mancuso
- Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, 3001, 12e av nord Sherbrooke (QC) J1H 5N4 (Canada)
| | - Annie Doucet
- Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, 3001, 12e av nord Sherbrooke (QC) J1H 5N4 (Canada)
| | - Andrei K Yudin
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 St. George Street, Toronto (ON) M5S 3H6 (Canada)
| | - Eric Marsault
- Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, 3001, 12e av nord Sherbrooke (QC) J1H 5N4 (Canada).
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14
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Neochoritis CG, Stotani S, Mishra B, Dömling A. Efficient isocyanide-less isocyanide-based multicomponent reactions. Org Lett 2015; 17:2002-5. [PMID: 25824100 PMCID: PMC4733495 DOI: 10.1021/acs.orglett.5b00759] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Isocyanides are the "Jekyll and Hyde" of organic chemistry allowing for extremely interesting transformations that are not only extremely odorous but also noxious. Therefore, an isocyanide-less isocyanide-based multicomponent reaction (IMCR) has been developed, and this protocol is expected to replace many of the old procedures in the future not only in IMCR but in other areas of organic chemistry as well.
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Affiliation(s)
| | - Silvia Stotani
- University of Groningen, Department of Drug Design, A. Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Bhupendra Mishra
- University of Groningen, Department of Drug Design, A. Deusinglaan 1, 9713 AV Groningen, The Netherlands
| | - Alexander Dömling
- University of Groningen, Department of Drug Design, A. Deusinglaan 1, 9713 AV Groningen, The Netherlands
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15
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Kumar NNB, Kuznetsov DM, Kutateladze AG. Intramolecular Cycloadditions of Photogenerated Azaxylylenes with Oxadiazoles Provide Direct Access to Versatile Polyheterocyclic Ketopiperazines Containing a Spiro-oxirane Moiety. Org Lett 2015; 17:438-41. [DOI: 10.1021/ol5033909] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- N. N. Bhuvan Kumar
- Department of Chemistry and
Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - Dmitry M. Kuznetsov
- Department of Chemistry and
Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - Andrei G. Kutateladze
- Department of Chemistry and
Biochemistry, University of Denver, Denver, Colorado 80208, United States
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16
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Ramanivas T, Gayatri G, Priyanka D, Nayak VL, Singarapu KK, Srivastava AK. Stereoselective synthesis of functionalized 1,2,3,4-tetrahydroisoquinolines (THIQs) via highly diastereoselective Ugi three-component reactions (U3CRs) with chiral 3,4-dihydroisoquinolines (DHIQs). RSC Adv 2015. [DOI: 10.1039/c5ra11144g] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
A highly diastereoselective Ugi three-component reaction (U3CR) of chiral 3,4-dihydroisoquinolines has been developed to synthesize enantiopure 1,2,3,4-tetrahydroisoquinolines (THIQs).
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Affiliation(s)
- T. Ramanivas
- Medicinal Chemistry and Pharmacology Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad 500 007
- India
- Academy of Scientific and Innovative Research
| | - G. Gayatri
- Centre for Molecular Modelling
- CSIR-Indian Institute of Chemical Technology
- Hyderabad 500 007
- India
| | - D. Priyanka
- Medicinal Chemistry and Pharmacology Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad 500 007
- India
| | - V. L. Nayak
- Medicinal Chemistry and Pharmacology Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad 500 007
- India
| | - K. K. Singarapu
- Centre for NMR and Structural Chemistry
- CSIR-Indian Institute of Chemical Technology
- Hyderabad 500 007
- India
| | - A. K. Srivastava
- Medicinal Chemistry and Pharmacology Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad 500 007
- India
- Academy of Scientific and Innovative Research
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