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Abstract
Photocatalytic formation of glycosidic bonds employing stable and readily accessible O-glycosyl derivatives of 2,2,6,6-tetramethylpiperidin-1-ol is presented that employs an iridium-based photocatalyst and blue LEDs. The reaction proceeds at room temperature and in the absence of additives other than 4 Å molecular sieves. Stereoselectivities are modest but nevertheless dependent on the anomeric configuration of the donor, suggesting a substantial degree of concerted character.
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Affiliation(s)
- Peng Wen
- Department of Chemistry, Wayne State University , Detroit, Michigan 48202, United States
| | - David Crich
- Department of Chemistry, Wayne State University , Detroit, Michigan 48202, United States
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2
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Abstract
The development of glycobiology relies on the sources of particular oligosaccharides in their purest forms. As the isolation of the oligosaccharide structures from natural sources is not a reliable option for providing samples with homogeneity, chemical means become pertinent. The growing demand for diverse oligosaccharide structures has prompted the advancement of chemical strategies to stitch sugar molecules with precise stereo- and regioselectivity through the formation of glycosidic bonds. This Review will focus on the key developments towards chemical O-glycosylations in the current century. Synthesis of novel glycosyl donors and acceptors and their unique activation for successful glycosylation are discussed. This Review concludes with a summary of recent developments and comments on future prospects.
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Affiliation(s)
- Rituparna Das
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
| | - Balaram Mukhopadhyay
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
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3
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Kunigami M, Hara S. Synthesis of glycosyl fluorides from (phenylthio)glycosides using IF5-pyridine-HF. Carbohydr Res 2015; 417:78-80. [PMID: 26432611 DOI: 10.1016/j.carres.2015.08.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2015] [Revised: 06/15/2015] [Accepted: 08/12/2015] [Indexed: 10/23/2022]
Abstract
IF5-pyridine-HF, an air- and moisture-stable fluorinating reagent, was applied to the synthesis of glycosyl fluorides from (phenylthio)glycosides. Common protecting groups of alcohol and diol can tolerate the reaction conditions performed, and therefore, the present method is applicable to the synthesis of various glycosyl fluorides.
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Affiliation(s)
- Masataka Kunigami
- Graduate School of Engineering, Hokkaido University, Sapporo 060-8628, Japan
| | - Shoji Hara
- Graduate School of Engineering, Hokkaido University, Sapporo 060-8628, Japan.
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4
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Bedin M, Karim A, Reitti M, Carlsson ACC, Topić F, Cetina M, Pan F, Havel V, Al-Ameri F, Sindelar V, Rissanen K, Gräfenstein J, Erdélyi M. Counterion influence on the N-I-N halogen bond. Chem Sci 2015; 6:3746-3756. [PMID: 29218144 PMCID: PMC5707496 DOI: 10.1039/c5sc01053e] [Citation(s) in RCA: 76] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Accepted: 04/20/2015] [Indexed: 12/13/2022] Open
Abstract
A detailed investigation of the influence of counterions on the [N-I-N]+ halogen bond in solution, in the solid state and in silico is presented. Translational diffusion coefficients indicate close attachment of counterions to the cationic, three-center halogen bond in dichloromethane solution. Isotopic perturbation of equilibrium NMR studies performed on isotopologue mixtures of regioselectively deuterated and nondeuterated analogues of the model system showed that the counterion is incapable of altering the symmetry of the [N-I-N]+ halogen bond. This symmetry remains even in the presence of an unfavorable geometric restraint. A high preference for the symmetric geometry was found also in the solid state by single crystal X-ray crystallography. Molecular systems encompassing weakly coordinating counterions behave similarly to the corresponding silver(i) centered coordination complexes. In contrast, systems possessing moderately or strongly coordinating anions show a distinctly different behavior. Such silver(i) complexes are converted into multi-coordinate geometries with strong Ag-O bonds, whereas the iodine centered systems remain linear and lack direct charge transfer interaction with the counterion, as verified by 15N NMR and DFT computation. This suggests that the [N-I-N]+ halogen bond may not be satisfactorily described in terms of a pure coordination bond typical of transition metal complexes, but as a secondary bond with a substantial charge-transfer character.
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Affiliation(s)
- Michele Bedin
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
| | - Alavi Karim
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
| | - Marcus Reitti
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
| | - Anna-Carin C Carlsson
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
| | - Filip Topić
- University of Jyvaskyla , Department of Chemistry , Nanoscience Center , P.O. Box. 35, FI-40014 University of Jyvaskyla , Finland
| | - Mario Cetina
- University of Jyvaskyla , Department of Chemistry , Nanoscience Center , P.O. Box. 35, FI-40014 University of Jyvaskyla , Finland
- Department of Applied Chemistry , Faculty of Textile Technology , University of Zagreb , Prilaz baruna Filipovića 28a , HR-10000 Zagreb , Croatia
| | - Fangfang Pan
- University of Jyvaskyla , Department of Chemistry , Nanoscience Center , P.O. Box. 35, FI-40014 University of Jyvaskyla , Finland
| | - Vaclav Havel
- Department of Chemistry and RECETOX , Masaryk University , Kamenice 5 , 625 00 Brno , Czech Republic
| | - Fatima Al-Ameri
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
| | - Vladimir Sindelar
- Department of Chemistry and RECETOX , Masaryk University , Kamenice 5 , 625 00 Brno , Czech Republic
| | - Kari Rissanen
- University of Jyvaskyla , Department of Chemistry , Nanoscience Center , P.O. Box. 35, FI-40014 University of Jyvaskyla , Finland
| | - Jürgen Gräfenstein
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
| | - Máté Erdélyi
- Department of Chemistry and Molecular Biology , University of Gothenburg , SE-412 96 Gothenburg , Sweden . ; Tel: +46-31-786 9033
- The Swedish NMR Centre , Medicinaregatan 5 , SE-413 90 Gothenburg , Sweden
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5
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Champagne PA, Desroches J, Hamel JD, Vandamme M, Paquin JF. Monofluorination of Organic Compounds: 10 Years of Innovation. Chem Rev 2015; 115:9073-174. [PMID: 25854146 DOI: 10.1021/cr500706a] [Citation(s) in RCA: 664] [Impact Index Per Article: 73.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Pier Alexandre Champagne
- Canada Research Chair in Organic and Medicinal Chemistry, CGCC, PROTEO, Département de Chimie, Université Laval , 1045 Avenue de la Médecine, Québec (QC), Canada G1V 0A6
| | - Justine Desroches
- Canada Research Chair in Organic and Medicinal Chemistry, CGCC, PROTEO, Département de Chimie, Université Laval , 1045 Avenue de la Médecine, Québec (QC), Canada G1V 0A6
| | - Jean-Denys Hamel
- Canada Research Chair in Organic and Medicinal Chemistry, CGCC, PROTEO, Département de Chimie, Université Laval , 1045 Avenue de la Médecine, Québec (QC), Canada G1V 0A6
| | - Mathilde Vandamme
- Canada Research Chair in Organic and Medicinal Chemistry, CGCC, PROTEO, Département de Chimie, Université Laval , 1045 Avenue de la Médecine, Québec (QC), Canada G1V 0A6
| | - Jean-François Paquin
- Canada Research Chair in Organic and Medicinal Chemistry, CGCC, PROTEO, Département de Chimie, Université Laval , 1045 Avenue de la Médecine, Québec (QC), Canada G1V 0A6
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Cresswell AJ, Davies SG, Roberts PM, Thomson JE. Beyond the Balz-Schiemann reaction: the utility of tetrafluoroborates and boron trifluoride as nucleophilic fluoride sources. Chem Rev 2014; 115:566-611. [PMID: 25084541 DOI: 10.1021/cr5001805] [Citation(s) in RCA: 126] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Alexander J Cresswell
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford , Mansfield Road, Oxford OX1 3TA, United Kingdom
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8
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Fraser-Reid B, Lopez JC, Bernal-Albert P, Gomez AM, Uriel C, Ventura J. Glycosyl fluorides from n-pentenyl-related glycosyl donors — Application to glycosylation strategies. CAN J CHEM 2013. [DOI: 10.1139/cjc-2012-0285] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
n-Pentenyl glycosides (NPGs) and n-pentenyl orthoesters (NPOEs) have been transformed into glycosyl fluorides by a variety of methods. In the case of NPGs, Barluenga’s reagent, bis(pyridinium)iodonium(I)tetrafluoroborate (IPy2BF4), gives good yields of glycosyl fluorides when HF–pyridine complex is used as an additional fluoride source. NPOEs can be activated either by a combination of electrophilic iodonium (Barluenga’s reagent) and HBF4 or by the action of HF–pyridine complex. The ensuing glycosyl fluorides form a semiorthogonal pair of glycosyl donors when confronted with NPGs.
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Affiliation(s)
- Bert Fraser-Reid
- Natural Products and Glycotechnology Research Institute Inc. (NPG), 595F Weathersfield Road, Pittsboro, NC 27312, USA
| | - J. Cristobal Lopez
- Instituto de Química Orgánica General (IQOG-CSIC), Juan de la Cierva 3, Madrid 28006, Spain
| | - Paloma Bernal-Albert
- Instituto de Química Orgánica General (IQOG-CSIC), Juan de la Cierva 3, Madrid 28006, Spain
| | - Ana M. Gomez
- Instituto de Química Orgánica General (IQOG-CSIC), Juan de la Cierva 3, Madrid 28006, Spain
| | - Clara Uriel
- Instituto de Química Orgánica General (IQOG-CSIC), Juan de la Cierva 3, Madrid 28006, Spain
| | - Juan Ventura
- Instituto de Química Orgánica General (IQOG-CSIC), Juan de la Cierva 3, Madrid 28006, Spain
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9
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Mugunthan G, Kartha KPR. A facile and convenient synthesis of disarmed glycosyl fluorides using in situ-generated iodine monofluoride (see Ref. 1). Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.08.024] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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10
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Synthesis of glycosyl fluorides from thio-, seleno-, and telluroglycosides and glycosyl sulfoxides using aminodifluorosulfinium tetrafluoroborates. Carbohydr Res 2012; 357:16-22. [DOI: 10.1016/j.carres.2012.04.016] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2012] [Revised: 04/23/2012] [Accepted: 04/23/2012] [Indexed: 11/19/2022]
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11
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Carlsson ACC, Gräfenstein J, Budnjo A, Laurila JL, Bergquist J, Karim A, Kleinmaier R, Brath U, Erdélyi M. Symmetric Halogen Bonding Is Preferred in Solution. J Am Chem Soc 2012; 134:5706-15. [DOI: 10.1021/ja301341h] [Citation(s) in RCA: 135] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Anna-Carin C. Carlsson
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Jürgen Gräfenstein
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Adnan Budnjo
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Jesse L. Laurila
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Jonas Bergquist
- Analytical Chemistry, Department
of Chemistry - Biomedical Center, Uppsala University, SE-751 24, Uppsala, Sweden
| | - Alavi Karim
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Roland Kleinmaier
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Ulrika Brath
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
| | - Máté Erdélyi
- Department
of Chemistry and
Molecular Biology, University of Gothenburg, SE-412 96 Gothenburg, Sweden
- The Swedish NMR Centre, Medicinaregatan
5c, SE-413 90 Gothenburg, Sweden
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12
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Kumar B, Aga MA, Rouf A, Shah BA, Taneja SC. 2,3-Unsaturated Allyl Glycosides as Glycosyl Donors for Selective α-Glycosylation. J Org Chem 2011; 76:3506-10. [DOI: 10.1021/jo102333x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Brijesh Kumar
- Bio-organic Chemistry Division, Indian Institute of Integrative Medicine (CSIR), Canal Road, Jammu, India-180001
| | - Mushtaq A. Aga
- Bio-organic Chemistry Division, Indian Institute of Integrative Medicine (CSIR), Canal Road, Jammu, India-180001
| | - Abdul Rouf
- Bio-organic Chemistry Division, Indian Institute of Integrative Medicine (CSIR), Canal Road, Jammu, India-180001
| | - Bhahwal A. Shah
- Bio-organic Chemistry Division, Indian Institute of Integrative Medicine (CSIR), Canal Road, Jammu, India-180001
| | - Subhash C. Taneja
- Bio-organic Chemistry Division, Indian Institute of Integrative Medicine (CSIR), Canal Road, Jammu, India-180001
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13
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López JC, Ventura J, Uriel C, Gómez AM, Fraser-Reid B. Reaction of 1,2-Orthoesters with HF−Pyridine: A Method for the Preparation of Partly Unprotected Glycosyl Fluorides and Their Use in Saccharide Synthesis. Org Lett 2009; 11:4128-31. [DOI: 10.1021/ol901630d] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- J. Cristóbal López
- Instituto de Química Orgánica General (CSIC), Juan de la Cierva 3, 28006 Madrid, Spain, and Natural Products and Glycotechnology Research Institute Inc. (NPG), 595F Weathersfield Road, Pittsboro, North Carolina 27312
| | - Juan Ventura
- Instituto de Química Orgánica General (CSIC), Juan de la Cierva 3, 28006 Madrid, Spain, and Natural Products and Glycotechnology Research Institute Inc. (NPG), 595F Weathersfield Road, Pittsboro, North Carolina 27312
| | - Clara Uriel
- Instituto de Química Orgánica General (CSIC), Juan de la Cierva 3, 28006 Madrid, Spain, and Natural Products and Glycotechnology Research Institute Inc. (NPG), 595F Weathersfield Road, Pittsboro, North Carolina 27312
| | - Ana M. Gómez
- Instituto de Química Orgánica General (CSIC), Juan de la Cierva 3, 28006 Madrid, Spain, and Natural Products and Glycotechnology Research Institute Inc. (NPG), 595F Weathersfield Road, Pittsboro, North Carolina 27312
| | - Bert Fraser-Reid
- Instituto de Química Orgánica General (CSIC), Juan de la Cierva 3, 28006 Madrid, Spain, and Natural Products and Glycotechnology Research Institute Inc. (NPG), 595F Weathersfield Road, Pittsboro, North Carolina 27312
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14
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López JC, Bernal-Albert P, Uriel C, Gómez AM. Ready Transformation of Partially Unprotected Thioglycosides into Glycosyl Fluorides Mediated by NIS/HF-Pyridine or Et3N·3HF. European J Org Chem 2008. [DOI: 10.1002/ejoc.200800754] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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