1
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Amino [13]-macrodilactones: Synthesis, derivatization, and structural motifs. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.152579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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2
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Rutledge KM, Griesbach C, Mercado BQ, Peczuh MW. Structures of three disubstituted [13]-macrodilactones reveal effects of substitution on macrocycle conformation. Acta Crystallogr E Crystallogr Commun 2020; 76:1617-1623. [PMID: 33117575 PMCID: PMC7534246 DOI: 10.1107/s2056989020012037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Accepted: 08/31/2020] [Indexed: 11/18/2022]
Abstract
The synthesis and crystal structures of three new disubstituted [13]-macrodilactones, trans-4,8-dimethyl-1,10-dioxacyclotridec-5-ene-2,9-dione, cis-4-(4-bromophenyl)-13-methyl-1,10-dioxacyclotridec-5-ene-2,9-dione, and trans-11-methyl-4-phenyl-1,10-dioxacyclotridec-5-ene-2,9-dione are reported and their conformations are put in the context of other [13]-macrodilactone structures reported previously, showing that the number, location, and relative disposition of groups attached at the termini of planar units of the [13]-macrodilactones subtly influence their aspect ratios. The synthesis and crystal structures of three new disubstituted [13]-macrodilactones, namely, trans-4,8-dimethyl-1,10-dioxacyclotridec-5-ene-2,9-dione, C13H20O4, I, cis-4-(4-bromophenyl)-13-methyl-1,10-dioxacyclotridec-5-ene-2,9-dione C18H21BrO4, II, and trans-11-methyl-4-phenyl-1,10-dioxacyclotridec-5-ene-2,9-dione, C18H22O4, III, are reported and their conformations are put in the context of other [13]-macrodilactone structures reported previously. Together, they show that the number, location, and relative disposition of groups attached at the termini of planar units of the [13]-macrodilactones subtly influence their aspect ratios.
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3
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Appavoo SD, Huh S, Diaz DB, Yudin AK. Conformational Control of Macrocycles by Remote Structural Modification. Chem Rev 2019; 119:9724-9752. [DOI: 10.1021/acs.chemrev.8b00742] [Citation(s) in RCA: 58] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Solomon D. Appavoo
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 Saint George Street, Toronto, Ontario, Canada M5S 3H6
| | - Sungjoon Huh
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 Saint George Street, Toronto, Ontario, Canada M5S 3H6
| | - Diego B. Diaz
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 Saint George Street, Toronto, Ontario, Canada M5S 3H6
| | - Andrei K. Yudin
- Davenport Research Laboratories, Department of Chemistry, University of Toronto, 80 Saint George Street, Toronto, Ontario, Canada M5S 3H6
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4
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Pote AR, Vannam R, Richard A, Gascón J, Peczuh MW. Formation of and Glycosylation with Per‐
O
‐Acetyl Septanosyl Halides: Rationalizing Complex Reactivity En Route to
p
‐Nitrophenyl Septanosides. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800310] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Aditya R. Pote
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 06269‐3060 Storrs CT USA
| | - Raghu Vannam
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 06269‐3060 Storrs CT USA
| | - Alissa Richard
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 06269‐3060 Storrs CT USA
| | - José Gascón
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 06269‐3060 Storrs CT USA
| | - Mark W. Peczuh
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 06269‐3060 Storrs CT USA
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5
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Rutledge KM, Hamlin TA, Baldisseri DM, Bickelhaupt FM, Peczuh MW. Macrocycles All Aflutter: Substitution at an Allylic Center Reveals the Conformational Dynamics of [13]‐Macrodilactones. Chem Asian J 2017; 12:2623-2633. [DOI: 10.1002/asia.201700997] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2017] [Revised: 08/04/2017] [Indexed: 11/08/2022]
Affiliation(s)
- Kelli M. Rutledge
- Department of Chemistry University of Connecticut 55 N. Eagleville Road U-3060 Storrs CT 06269 USA
| | - Trevor A. Hamlin
- Department of Theoretical Chemistry and Amsterdam Center for Multiscale Modeling Vrije Universiteit Amsterdam, NL- 1081 HV Amsterdam The Netherlands
| | - Donna M. Baldisseri
- Bruker BioSpin Corporation 15 Fortune Drive, Manning Park Billerica MA 01821 USA
| | - F. Matthias Bickelhaupt
- Department of Theoretical Chemistry and Amsterdam Center for Multiscale Modeling Vrije Universiteit Amsterdam, NL- 1081 HV Amsterdam The Netherlands
- Institute of Molecules and Materials Radboud University 6525 AJ Nijmegen The Netherlands
| | - Mark W. Peczuh
- Department of Chemistry University of Connecticut 55 N. Eagleville Road U-3060 Storrs CT 06269 USA
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6
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Si D, Peczuh MW. Synthesis and structure of a carbohydrate-fused [15]-macrodilactone. Carbohydr Res 2016; 434:113-120. [PMID: 27639337 DOI: 10.1016/j.carres.2016.08.010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2016] [Revised: 08/24/2016] [Accepted: 08/26/2016] [Indexed: 10/21/2022]
Abstract
The design, synthesis and structural characterization of a new α-d-glucose fused [15]-macrodilactone is reported. The macrolide was synthesized by a route involving sequential acylations of glucose at the C4' and C6' hydroxyl groups followed by an intramolecular Stille reaction previously established for other [15]-macrodilactones. Analysis of the X-ray crystallographic structure of the macrolide revealed a unique conformation of this macrocycle that differs from earlier models for [13]- and [15]-macrodilactones. Organizing the three planar units and the pyranose moiety into a macrocyclic ring resulted in a cup-shaped structure with planar chirality. Further, the gt conformation of the exocyclic hydroxymethyl group in the glucose unit was found to be crucial for controlling the planar chirality and, hence, governing the molecular shape and overall topology of the compound.
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Affiliation(s)
- Debjani Si
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road, U3060, Storrs, CT 06269, USA
| | - Mark W Peczuh
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road, U3060, Storrs, CT 06269, USA.
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7
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Magpusao AN, Rutledge K, Hamlin TA, Lawrence J, Mercado BQ, Leadbeater NE, Peczuh MW. Rules of Macrocycle Topology: A [13]‐Macrodilactone Case Study. Chemistry 2016; 22:6001-11. [DOI: 10.1002/chem.201504684] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2015] [Revised: 02/23/2016] [Indexed: 12/29/2022]
Affiliation(s)
- Anniefer N. Magpusao
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 Storrs CT 06269-3060 USA
| | - Kelli Rutledge
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 Storrs CT 06269-3060 USA
| | - Trevor A. Hamlin
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 Storrs CT 06269-3060 USA
- Department of Theoretical Chemistry VU University Amsterdam De Boelelaan 1083 1081 HV Amsterdam The Netherlands
| | - Jean‐Marc Lawrence
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 Storrs CT 06269-3060 USA
| | - Brandon Q. Mercado
- Department of Chemistry Yale University 225 Prospect Street New Haven CT 06520 USA
| | - Nicholas E. Leadbeater
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 Storrs CT 06269-3060 USA
| | - Mark W. Peczuh
- Department of Chemistry University of Connecticut 55 N. Eagleville Road, U3060 Storrs CT 06269-3060 USA
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8
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Magpusao AN, Rutledge K, Mercado BQ, Peczuh MW. Stereogenic α-carbons determine the shape and topology of [13]-macrodilactones. Org Biomol Chem 2015; 13:5086-9. [DOI: 10.1039/c5ob00402k] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The configuration of α-stereogenic centers affects the shape and topology of [13]-macrodilactones. When one α-stereogenic center is substituted, it directs the planar chirality of the macrocycle; when two centers are substituted, both the shape and the topology are influenced.
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Affiliation(s)
| | - Kelli Rutledge
- Department of Chemistry
- University of Connecticut
- Storrs
- USA
| | | | - Mark W. Peczuh
- Department of Chemistry
- University of Connecticut
- Storrs
- USA
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9
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Si D, Peczuh MW. Synthesis, structure and reactivity of [15]-macrodilactones. Org Biomol Chem 2015; 13:6463-7. [DOI: 10.1039/c5ob00809c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Synthesis and characterization of some new [15]-macrodilactones revealed that the interplay between three planar units, a stereogenic center and a hinge atom generated a planar chirality that governs their molecular topology.
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Affiliation(s)
- Debjani Si
- Department of Chemistry
- University of Connecticut
- Storrs
- USA
| | - Mark W. Peczuh
- Department of Chemistry
- University of Connecticut
- Storrs
- USA
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10
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Das SN, Rana R, Chatterjee S, Suresh Kumar G, Mandal SB. Ring-Closing Metathesis and Glycosylation Reactions: Synthesis and Biophysical Studies of Polyether-Linked Carbohydrate-Based Macrocyclic Nucleosides. J Org Chem 2014; 79:9958-69. [DOI: 10.1021/jo501857k] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Soumendra Nath Das
- Chemistry
Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C.
Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Richa Rana
- National Institute of Pharmaceutical Education and Research, 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Sabyasachi Chatterjee
- Chemistry
Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C.
Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Gopinatha Suresh Kumar
- Chemistry
Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C.
Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Sukhendu B. Mandal
- Chemistry
Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C.
Mullick Road, Jadavpur, Kolkata 700 032, India
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11
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Desmond RT, Magpusao AN, Lorenc C, Alverson JB, Priestley N, Peczuh MW. De novo macrolide-glycolipid macrolactone hybrids: Synthesis, structure and antibiotic activity of carbohydrate-fused macrocycles. Beilstein J Org Chem 2014; 10:2215-21. [PMID: 25246980 PMCID: PMC4168945 DOI: 10.3762/bjoc.10.229] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Accepted: 08/29/2014] [Indexed: 01/17/2023] Open
Abstract
Natural product-like macrocycles were designed as potential antibacterial compounds. The macrocycles featured a D-glucose unit fused into a 12- or 13-member macrolactone. The rings are connected via the C6' and anomeric (C1') positions of the monosaccharide. The new macrocycles/macrolides were characterized by X-ray crystallography. Their structures showed that, in addition to the ester and alkene units, the dihedral angle about the glycosidic linkage (exo-anomeric effect) influenced the overall shape of the molecules. Glycosylation of an available hydroxy group on the macrocycle gave a hybrid macrolide with features common to erythromycin and sophorlipid macrolactone. Weak antibiotic activity (MICs <100 μg/mL) was observed for several of the compounds.
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Affiliation(s)
- Richard T Desmond
- Department of Chemistry, University of Connecticut, 55 N. Eagleville Road, U3060, Storrs, CT 06269, USA, +1-860-486-1605 FAX: +1-860-486-2981
| | - Anniefer N Magpusao
- Department of Chemistry, University of Connecticut, 55 N. Eagleville Road, U3060, Storrs, CT 06269, USA, +1-860-486-1605 FAX: +1-860-486-2981
| | - Chris Lorenc
- Department of Chemistry, University of Connecticut, 55 N. Eagleville Road, U3060, Storrs, CT 06269, USA, +1-860-486-1605 FAX: +1-860-486-2981
| | - Jeremy B Alverson
- Department of Chemistry and Biochemistry, University of Montana, Missoula, MT 59812, USA
| | - Nigel Priestley
- Department of Chemistry and Biochemistry, University of Montana, Missoula, MT 59812, USA
| | - Mark W Peczuh
- Department of Chemistry, University of Connecticut, 55 N. Eagleville Road, U3060, Storrs, CT 06269, USA, +1-860-486-1605 FAX: +1-860-486-2981
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12
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Ma J, Vannam R, Terwilliger DW, Peczuh MW. Synthesis, structure and reactivity of a macrocyclic imine: aza-[13]-macrodiolides. Tetrahedron Lett 2014. [DOI: 10.1016/j.tetlet.2014.05.081] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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13
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Ma J, Peczuh MW. Positioning and Configuration of Key Atoms Influence the Topology of [13]-Macrodiolides. J Org Chem 2013; 78:7414-22. [DOI: 10.1021/jo400383g] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Jun Ma
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road U3060, Storrs,
Connecticut 06269, United States
| | - Mark W. Peczuh
- Department of Chemistry, University of Connecticut, 55 North Eagleville Road U3060, Storrs,
Connecticut 06269, United States
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14
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Potopnyk MA, Cmoch P, Jarosz S. Short Synthesis of Diamide-Linked Sucrose Macrocycles. Org Lett 2012; 14:4258-61. [DOI: 10.1021/ol301993d] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Mykhaylo A. Potopnyk
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Piotr Cmoch
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Sławomir Jarosz
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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15
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Jackowski O, Chrétien F, Didierjean C, Chapleur Y. Formation of septanoses from hexopyranosides via 5,6-exo-glycals. Carbohydr Res 2012; 356:93-103. [DOI: 10.1016/j.carres.2012.02.026] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2011] [Revised: 02/20/2012] [Accepted: 02/25/2012] [Indexed: 01/07/2023]
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16
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Allam A, Dupont L, Behr JB, Plantier-Royon R. Convenient Synthesis of a Galacturonic Acid Based Macrocycle with Potential Copper-Complexation Ability. European J Org Chem 2011. [DOI: 10.1002/ejoc.201101406] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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17
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Fujikawa K, Ganesh NV, Tan YH, Stine KJ, Demchenko AV. Reverse orthogonal strategy for oligosaccharide synthesis. Chem Commun (Camb) 2011; 47:10602-4. [PMID: 21892457 DOI: 10.1039/c1cc13409d] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Herein, we report the invention of a novel expeditious concept for oligosaccharide synthesis. Unlike the classic orthogonal strategy based on leaving groups, the reverse approach is based on orthogonal protecting groups, herein p-methoxybenzyl and 4-pentenoyl, which allows for efficient oligosaccharide assembly in the reverse direction.
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Affiliation(s)
- Kohki Fujikawa
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA
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18
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Magpusao AN, Desmond RT, Billings KJ, Fenteany G, Peczuh MW. Synthesis and evaluation of antimigratory and antiproliferative activities of lipid-linked [13]-macro-dilactones. Bioorg Med Chem Lett 2010; 20:5472-6. [PMID: 20709546 DOI: 10.1016/j.bmcl.2010.07.083] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2010] [Revised: 07/19/2010] [Accepted: 07/20/2010] [Indexed: 12/21/2022]
Abstract
The biological activities of a family of novel, lipid-linked 13-membered-ring macro-dilactones are reported. These [13]-macro-dilactones were synthesized by diacylation of functionalized diols, followed by ring-closing metathesis under conditions we had previously reported. Antimigratory, cytostatic and cytotoxic activities of the compounds against cancer cells were evaluated. Compound 13 was the most potent in the series, while compound 10 had the broadest concentration range of subtoxic antiproliferative activity. These compounds share common structural components, namely the [13]-macro-dilactone templated by an octyl alpha-glucoside 4,6-diol.
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Affiliation(s)
| | - Paul V. Murphy
- School of Chemistry, National University of Ireland, Galway, Ireland, Fax: +353‐91‐525700
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20
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The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2008. Coord Chem Rev 2010. [DOI: 10.1016/j.ccr.2009.07.018] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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21
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Poeylaut-Palena AA, Mata EG. Unravelling the olefin cross metathesis on solid support. Factors affecting the reaction outcome. Org Biomol Chem 2010; 8:3947-56. [DOI: 10.1039/c004729e] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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22
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Braddock DC, Millan DS, Pérez-Fuertes Y, Pouwer RH, Sheppard RN, Solanki S, White AJP. Bromonium Ion Induced Transannular Oxonium Ion Formation−Fragmentation in Model Obtusallene Systems and Structural Reassignment of Obtusallenes V−VII. J Org Chem 2009; 74:1835-41. [DOI: 10.1021/jo8026577] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- D. Christopher Braddock
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
| | - David S. Millan
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
| | - Yolanda Pérez-Fuertes
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
| | - Rebecca H. Pouwer
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
| | - Richard N. Sheppard
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
| | - Savade Solanki
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
| | - Andrew J. P. White
- Department of Chemistry, Imperial College London, South Kensington, London SW7 2AZ, U.K., and Sandwich Laboratories, Pfizer Global Research and Development, Ramsgate Road, Sandwich, Kent CT13 9NJ, U.K
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Fyvie WS, Peczuh MW. Remote induction of asymmetry in [13]-macro-dilactone topology by a single stereogenic center. Chem Commun (Camb) 2008:4028-30. [DOI: 10.1039/b807562j] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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