1
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Badeji AA, Liu Y, Oladipo SD, Osinubi AD. Computational insights into the mechanisms and origins of switchable selectivity in gold(i)-catalyzed annulation of ynamides with isoxazoles via 6π-electrocyclizations of azaheptatrienyl cations. RSC Adv 2023; 13:18025-18037. [PMID: 37323448 PMCID: PMC10265590 DOI: 10.1039/d3ra02839a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Accepted: 06/05/2023] [Indexed: 06/17/2023] Open
Abstract
Electrocyclizations of acyclic conjugated π-motifs have emerged as a versatile and effective strategy for accessing various ring systems with excellent functional group tolerability and controllable selectivity. Typically, the realization of 6π-electrocyclization of heptatrienyl cations to afford seven-membered motif has proven difficult due to the high-energy state of the cyclizing seven-membered intermediate. Instead, it undergoes the Nazarov cyclization, affording a five-membered pyrrole product. However, the incorporation of a Au(i)-catalyst, a nitrogen atom and tosylamide group in the heptatrienyl cations unexpectedly circumvented the aforementioned high energy state to afford a seven-membered azepine product via 6π-electrocyclization in the annulation of 3-en-1-ynamides with isoxazoles. Therefore, extensive computational studies were carried out to investigate the mechanism of Au(i)-catalyzed [4+3] annulation of 3-en-1-ynamides with dimethylisoxazoles to produce a seven-membered 4H-azepine via the 6π-electrocyclization of azaheptatrienyl cations. Computational results showed that after the formation of the key α-imino gold carbene intermediate, the annulation of 3-en-1-ynamides with dimethylisoxazole occurs via the unusual 6π-electrocyclization to afford a seven-membered 4H-azepine exclusively. However, the annulation of 3-cyclohexen-1-ynamides with dimethylisoxazole occurs via the commonly proposed aza-Nazarov cyclization pathway to majorly generate five-membered pyrrole derivatives. The results from the DFT predictive analysis revealed that the key factors responsible for the different chemo-, and regio-selectivities observed are the cooperating effect of the tosylamide group on C1, the uninterrupted π-conjugation pattern of the α-imino gold(i) carbene and the substitution pattern at the cyclization termini. The Au(i)-catalyst is believed to assist in the stabilization of the azaheptatrienyl cation.
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Affiliation(s)
| | - Yuan Liu
- School of Chemistry and Chemical Engineering, Nantong University 9 Seyuan Road Nantong 226019 China
| | - Segun D Oladipo
- Department of Chemical Sciences, Olabisi Onabanjo University 2002 Ago-Iwoye Nigeria
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2
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Singh PK, Khuntey B, Bhardiya SR, Singh M, Rai VK, Rai A. Co‐operative
Visible‐Light
and Cu/
Cu
2
O
@
g‐C3N4
Catalysis Towards Hantzsch/Biginelli Synthesis of
Dihydro‐Pyridine
/Pyrimidine. J Heterocycl Chem 2022. [DOI: 10.1002/jhet.4575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Puneet K. Singh
- School of Physical Sciences Jawaharlal Nehru University New Delhi India
| | - Bhushashi Khuntey
- Department of Chemistry Guru Ghasidas Vishwavidyalaya Bilaspur Chhattisgarh India
| | - Smita R. Bhardiya
- Department of Chemistry Guru Ghasidas Vishwavidyalaya Bilaspur Chhattisgarh India
| | - Manorama Singh
- Department of Chemistry Guru Ghasidas Vishwavidyalaya Bilaspur Chhattisgarh India
| | - Vijai K. Rai
- Department of Chemistry Guru Ghasidas Vishwavidyalaya Bilaspur Chhattisgarh India
| | - Ankita Rai
- School of Physical Sciences Jawaharlal Nehru University New Delhi India
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3
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Reddy CR, Patil AD, Mohammed SZ. Oxa-[3+3] annulation of MBH-carbonates of propiolaldehydes with α-nitro/bromo ketones to access 2H-pyrans. Chem Commun (Camb) 2020; 56:7191-7194. [PMID: 32467956 DOI: 10.1039/d0cc02947e] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
A novel alkyne-assisted annulation reaction of MBH-carbonates of propiolaldehydes with α-nitro/bromo ketones is reported, providing a facile synthesis of substituted 2H-pyrans in good yields. This reaction divulges the inimitable reactivity of the MBH-carbonates of propiolaldehydes as C3-synthons wherein the alkyne functionality promoted the reaction without participating in the oxa-[3+3] annulation. The obtained products, having alkyne and ester functionalities, allowed further annulations to generate diverse pyrano[3,4-c]pyran-1-ones.
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Affiliation(s)
- Chada Raji Reddy
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology, Hyderabad 500007, India.
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4
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Tejedor D, García-Tellado F, Delgado-Hernández S, Diana-Rivero R, Díaz-Díaz A. Recent Advances in the Synthesis of 2 H-Pyrans. Molecules 2019; 24:E2904. [PMID: 31405075 PMCID: PMC6720217 DOI: 10.3390/molecules24162904] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Revised: 08/08/2019] [Accepted: 08/09/2019] [Indexed: 11/17/2022] Open
Abstract
In this review, we discuss the nature of the different physicochemical factors affecting the valence isomerism between 2H-pyrans (2HPs) and 1-oxatrienes, and we describe the most versatile synthetic methods reported in recent literature to access to 2HPs, with the only exception of 2HPs fused to aromatic rings (i.e., 2H-chromenes), which are not included in this review.
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Affiliation(s)
- David Tejedor
- Instituto de Productos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas, Astrofísico Francisco Sánchez 3, 38206 La Laguna, Tenerife, Spain.
| | - Fernando García-Tellado
- Instituto de Productos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas, Astrofísico Francisco Sánchez 3, 38206 La Laguna, Tenerife, Spain.
| | - Samuel Delgado-Hernández
- Instituto de Productos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas, Astrofísico Francisco Sánchez 3, 38206 La Laguna, Tenerife, Spain
- Doctoral and Postgraduate School, Universidad de La Laguna, Astrofísico Francisco Sánchez, SN, 38200 La Laguna, Tenerife, Spain
| | - Raquel Diana-Rivero
- Instituto de Productos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas, Astrofísico Francisco Sánchez 3, 38206 La Laguna, Tenerife, Spain
- Doctoral and Postgraduate School, Universidad de La Laguna, Astrofísico Francisco Sánchez, SN, 38200 La Laguna, Tenerife, Spain
| | - Abián Díaz-Díaz
- Instituto de Productos Naturales y Agrobiología, Consejo Superior de Investigaciones Científicas, Astrofísico Francisco Sánchez 3, 38206 La Laguna, Tenerife, Spain
- Doctoral and Postgraduate School, Universidad de La Laguna, Astrofísico Francisco Sánchez, SN, 38200 La Laguna, Tenerife, Spain
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5
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Mora-Radó H, Sotorríos L, Ball-Jones MP, Bialy L, Czechtizky W, Méndez M, Gómez-Bengoa E, Harrity JPA. Synthetic and Mechanistic Investigation of an Oxime Ether Electrocyclization Approach to Heteroaromatic Boronic Acid Derivatives. Chemistry 2018; 24:9530-9534. [DOI: 10.1002/chem.201802350] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Indexed: 11/11/2022]
Affiliation(s)
- Helena Mora-Radó
- Department of Chemistry; University of Sheffield; Sheffield S3 7HF U.K
| | - Lia Sotorríos
- Departamento de Química Organica I; Universidad del País Vasco; San Sebastian 20018 Spain
| | | | - Laurent Bialy
- Integrated Drug discovery, R&D; Sanofi Aventis (Deutschland) GmbH; Industriepark Höchst 65926 Frankfurt Am Main Germany
| | - Werngard Czechtizky
- Integrated Drug discovery, R&D; Sanofi Aventis (Deutschland) GmbH; Industriepark Höchst 65926 Frankfurt Am Main Germany
- Present address: Respiratory, Inflammation, Autoimmunity IMED Biotech Unit; AstraZeneca; Gothenburg Sweden
| | - María Méndez
- Integrated Drug discovery, R&D; Sanofi Aventis (Deutschland) GmbH; Industriepark Höchst 65926 Frankfurt Am Main Germany
| | - Enrique Gómez-Bengoa
- Departamento de Química Organica I; Universidad del País Vasco; San Sebastian 20018 Spain
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6
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Giri SS, Liu RS. Gold-catalyzed [4+3]- and [4+2]-annulations of 3-en-1-ynamides with isoxazoles via novel 6π-electrocyclizations of 3-azahepta trienyl cations. Chem Sci 2018; 9:2991-2995. [PMID: 29732082 PMCID: PMC5915799 DOI: 10.1039/c8sc00232k] [Citation(s) in RCA: 85] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2018] [Accepted: 02/18/2018] [Indexed: 12/22/2022] Open
Abstract
New gold-catalyzed [4+3]-annulations of 3-en-1-ynamides with isoxazoles afford 4H-azepines efficiently; this process involves 6π electrocyclizations of gold-stabilized 3-azaheptatrienyl cations. In the presence of Zn(OTf)2, the resulting 4H-azepines undergo skeletal rearrangement to furnish substituted pyridine derivatives. We subsequently develop new catalytic [4+2]-annulations between the same 3-en-1-ynamides and isoxazoles to deliver substituted pyridine products using Au(i)/Zn(ii) catalysts. This work reports the first success of the 6π electrocyclizations of heptatrienyl cations that are unprecedented in literature reports.
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Affiliation(s)
- Sovan Sundar Giri
- Department of Chemistry , National Tsing-Hua University , Hsinchu , Taiwan , Republic of China .
| | - Rai-Shung Liu
- Department of Chemistry , National Tsing-Hua University , Hsinchu , Taiwan , Republic of China .
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7
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Chang L, Plevová K, Thorimbert S, Dechoux L. Preparation of Substituted 2H-Pyrans via a Cascade Reaction from Methyl Coumalate and Activated Methylene Nucleophiles. J Org Chem 2017; 82:5499-5505. [PMID: 28471191 DOI: 10.1021/acs.joc.7b00761] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The reaction of methyl coumalate with a wide range of methylene active compounds, such as keto-esters or keto-sulfones and cyclic or acyclic diketones, afforded more than 30 2,3,5,6-tetrasubstituted 2H-pyrans. The reaction proceeds via a cascade reaction involving a Michael addition-6π-electrocyclic ring opening-proton transfer and 6π electrocyclization, in which a variety of functional groups were tolerated.
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Affiliation(s)
- Liang Chang
- Sorbonne Universités , UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire, UMR CNRS 8232, 4 place Jussieu, F-75005 Paris, France
| | - Kristína Plevová
- Sorbonne Universités , UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire, UMR CNRS 8232, 4 place Jussieu, F-75005 Paris, France
| | - Serge Thorimbert
- Sorbonne Universités , UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire, UMR CNRS 8232, 4 place Jussieu, F-75005 Paris, France
| | - Luc Dechoux
- Sorbonne Universités , UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire, UMR CNRS 8232, 4 place Jussieu, F-75005 Paris, France
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8
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Percy JM, Emerson H, Fyfe JWB, Kennedy AR, Maciuk S, Orr D, Rathouská L, Redmond JM, Wilson PG. Modular Construction of Fluoroarenes from a New Difluorinated Building Block by Cross-Coupling/Electrocyclisation/Dehydrofluorination Reactions. Chemistry 2016; 22:12166-75. [DOI: 10.1002/chem.201601584] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Jonathan M. Percy
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - Helena Emerson
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - James W. B. Fyfe
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - Alan R. Kennedy
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - Sergej Maciuk
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - David Orr
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - Lucie Rathouská
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
| | - Joanna M. Redmond
- Allergic Inflammation DPU; GlaxoSmithKline Medicines Research Centre; Gunnels Wood Road Stevenage SG1 2NY UK
| | - Peter G. Wilson
- WestCHEM Department of Pure and Applied Chemistry; University of Strathclyde; Thomas Graham Building 295 Cathedral Street Glasgow G1 1XL UK
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9
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Nisa RU, Hashmi MA, Sajjad S, Mahmood T, Iqbal J, Ayub K. Quantum mechanical investigation on acceleration of electrocyclic reactions through transition metal catalysis. J Organomet Chem 2016. [DOI: 10.1016/j.jorganchem.2016.02.017] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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10
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Wen TB, Lee KH, Chen J, Hung WY, Bai W, Li H, Sung HHY, Williams ID, Lin Z, Jia G. Preparation of Osmium η3-Allenylcarbene Complexes and Their Uses for the Syntheses of Osmabenzyne Complexes. Organometallics 2016. [DOI: 10.1021/acs.organomet.6b00102] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Ting Bin Wen
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Ka-Ho Lee
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Jiangxi Chen
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Wai Yiu Hung
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Wei Bai
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Huacheng Li
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Herman H. Y. Sung
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Ian D. Williams
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Zhenyang Lin
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
| | - Guochen Jia
- Department of Chemistry, The Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
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11
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Synthesis, photochemical and luminescent properties of (E)-2-(2-hydroxyarylethylene)-3-phenylquinazolin-4(3H)-ones. Russ Chem Bull 2015. [DOI: 10.1007/s11172-014-0764-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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12
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Agarwal J, Bayounes O, Thorimbert S, Dechoux L. Stereoselective synthesis of conjugated α-Z/γ-E and α-Z/γ-Z dienoic acids. Kinetic torquoselectivity versus thermodynamic control. RSC Adv 2014. [DOI: 10.1039/c3ra45309j] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
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13
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Yin G, Zhu Y, Wang N, Lu P, Wang Y. Lewis acid-promoted cascade reaction of primary amine, 2-butynedioate, and propargylic alcohol: a convenient approach to 1,2-dihydropyridines and 1H-pyrrolo[3,4-b]pyridine-5,7(2H,6H)-diones. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.07.076] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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14
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Tandem [1,5]-H shift/6π-electrocyclizations of ketenimines bearing 1,3-oxathiane units. Computational assessment of the experimental diastereoselection. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.04.021] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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15
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Bozkaya U, Özkan L. Thermal Rearrangements of 1-Ethynyl-2-methylcyclopropane: A Computational Study. J Phys Chem A 2012; 116:3274-81. [DOI: 10.1021/jp3000575] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Uğur Bozkaya
- Department of Chemistry, Atatürk University, Erzurum 25240, Turkey
- Department of Chemistry, Middle East Technical University, Ankara 06800, Turkey
| | - l̇lker Özkan
- Department of Chemistry, Middle East Technical University, Ankara 06800, Turkey
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16
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Zhou P, Ayers PW, Liu S, Li T. Natural orbital Fukui function and application in understanding cycloaddition reaction mechanisms. Phys Chem Chem Phys 2012; 14:9890-6. [DOI: 10.1039/c2cp40488e] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Graulich N. The Cope rearrangement—the first born of a great family. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2011. [DOI: 10.1002/wcms.17] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Nicole Graulich
- Justus‐Liebig University Giessen, Institute of Organic Chemistry, Giessen, Hessen, Germany
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18
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Kaufman Y, Ma L, Washington I. Deuterium enrichment of vitamin A at the C20 position slows the formation of detrimental vitamin A dimers in wild-type rodents. J Biol Chem 2010; 286:7958-7965. [PMID: 21075840 DOI: 10.1074/jbc.m110.178640] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
Degenerative eye diseases are the most common causes of untreatable blindness. Accumulation of lipofuscin (granular deposits) in the retinal pigment epithelium (RPE) is a hallmark of major degenerative eye diseases such as Stargardt disease, Best disease, and age-related macular degeneration. The intrinsic reactivity of vitamin A leads to its dimerization and to the formation of pigments such as A2E, and is believed to play a key role in the formation of ocular lipofuscin. We sought a clinically pragmatic method to slow vitamin A dimerization as a means to elucidate the pathogenesis of macular degenerations and to develop a therapeutic intervention. We prepared vitamin A enriched with the stable isotope deuterium at carbon twenty (C20-D(3)-vitamin A). Results showed that dimerization of deuterium-enriched vitamin A was considerably slower than that of vitamin A at natural abundance as measured in vitro. Administration of C20-D(3)-vitamin A to wild-type rodents with no obvious genetic defects in vitamin A processing, slowed A2E biosynthesis. This study elucidates the mechanism of A2E biosynthesis and suggests that administration of C20-D(3)-vitamin A may be a viable, long-term approach to retard vitamin A dimerization and by extension, may slow lipofuscin deposition and the progression of common degenerative eye diseases.
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Affiliation(s)
- Yardana Kaufman
- From the Department of Ophthalmology, Columbia University Medical Center, New York, New York 10032
| | - Li Ma
- From the Department of Ophthalmology, Columbia University Medical Center, New York, New York 10032
| | - Ilyas Washington
- From the Department of Ophthalmology, Columbia University Medical Center, New York, New York 10032.
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19
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Solano Espinoza EA, Vallejo Narváez WE. Density functional theory and RRKM calculations of decompositions of the metastable E-2,4-pentadienal molecular ions. JOURNAL OF MASS SPECTROMETRY : JMS 2010; 45:722-733. [PMID: 20623488 DOI: 10.1002/jms.1760] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The potential energy profiles for the fragmentations that lead to [C(5)H(5)O](+) and [C(4)H(6)](+*) ions from the molecular ions [C(5)H(6)O](+*) of E-2,4-pentadienal were obtained from calculations at the UB3LYP/6-311G + + (3df,3pd)//UB3LYP/6-31G(d,p) level of theory. Kinetic barriers and harmonic frequencies obtained by the density functional method were then employed in Rice-Ramsperger-Kassel-Marcus calculations of individual rate coefficients for a large number of reaction steps. The pre-equilibrium and rate-controlling step approximations were applied to different regions of the complex potential energy surface, allowing the overall rate of decomposition to be calculated and discriminated between three rival pathways: C-H bond cleavage, decarbonylation and cyclization. These processes should have to compete for an equilibrated mixture of four conformers of the E-2,4-pentadienal ions. The direct dissociation, however, can only become important in the high-energy regime. In contrast, loss of CO and cyclization are observable processes in the metastable kinetic window. The former involves a slow 1,2-hydrogen shift from the carbonyl group that is immediately followed by the formation of an ion-neutral complex which, in turn, decomposes rapidly to the s-trans-1,3-butadiene ion [C(4)H(6)](+*). The predominating metastable channel is the second one, that is, a multi-step ring closure which starts with a rate-limiting cis-trans isomerization. This process yields a mixture of interconverting pyran ions that dissociates to the pyrylium ions [C(5)H(5)O](+). These results can be used to rationalize the CID mass spectrum of E-2,4-pentadienal in a low-energy regime.
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Affiliation(s)
- Eduardo A Solano Espinoza
- Laboratorio de Química Teórica, Departamento de Química, Universidad de Nariño, Sede Torobajo, Calle 18 Carrera 50, Pasto, Colombia.
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20
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Souto JA, Pérez M, Silva López C, Álvarez R, Torrado A, de Lera AR. Competing Thermal Electrocyclic Ring-Closure Reactions of (2Z)-Hexa-2,4,5-trienals and Their Schiff Bases. Structural, Kinetic, and Computational Studies. J Org Chem 2010; 75:4453-62. [DOI: 10.1021/jo100558p] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- José A. Souto
- Departamento de Química Orgánica, Universidade de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo, Spain
| | - Martín Pérez
- Departamento de Química Orgánica, Universidade de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo, Spain
| | - Carlos Silva López
- Departamento de Química Orgánica, Universidade de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo, Spain
| | - Rosana Álvarez
- Departamento de Química Orgánica, Universidade de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo, Spain
| | - Alicia Torrado
- Departamento de Química Orgánica, Universidade de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo, Spain
| | - Angel R. de Lera
- Departamento de Química Orgánica, Universidade de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo, Spain
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21
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Alajarin M, Bonillo B, Sanchez-Andrada P, Vidal A. Tandem 1,5-Hydride Shift/1,5-S,N-Cyclization with Ethylene Extrusion of 1,3-Oxathiolane-Substituted Ketenimines and Carbodiimides. An Experimental and Computational Study. J Org Chem 2010; 75:3737-50. [DOI: 10.1021/jo100502p] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Mateo Alajarin
- Departamento de Quimica Organica, Facultad de Quimica, Universidad de Murcia, Campus de Espinardo, 30100 Murcia, Spain
| | - Baltasar Bonillo
- Departamento de Quimica Organica, Facultad de Quimica, Universidad de Murcia, Campus de Espinardo, 30100 Murcia, Spain
| | - Pilar Sanchez-Andrada
- Departamento de Quimica Organica, Facultad de Quimica, Universidad de Murcia, Campus de Espinardo, 30100 Murcia, Spain
| | - Angel Vidal
- Departamento de Quimica Organica, Facultad de Quimica, Universidad de Murcia, Campus de Espinardo, 30100 Murcia, Spain
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22
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Gao GL, Niu YN, Yan ZY, Wang HL, Wang GW, Shaukat A, Liang YM. Unexpected Domino Reaction via Pd-Catalyzed Sonogashira Coupling of Benzimidoyl Chlorides with 1,6-Enynes and Cyclization To Synthesize Quinoline Derivatives. J Org Chem 2010; 75:1305-8. [DOI: 10.1021/jo9026116] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Guo-Lin Gao
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
| | - Yan-Ning Niu
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
| | - Ze-Yi Yan
- Laboratory of Radiochemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
| | - Hong-Li Wang
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
| | - Gang-Wei Wang
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
| | - Ali Shaukat
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
| | - Yong-Min Liang
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, People’s Republic of China
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23
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Um JM, Xu H, Houk KN, Tang W. Thermodynamic control of the electrocyclic ring opening of cyclobutenes: C=X substituents at C-3 mask the kinetic torquoselectivity. J Am Chem Soc 2009; 131:6664-5. [PMID: 19402639 PMCID: PMC2744767 DOI: 10.1021/ja9016446] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The thermal ring-opening reactions of 4-phenyl-1,3,3-triethoxycarbonylcyclobutene and 4-methyl-1,3,3-triethoxycarbonylcyclobutene yield dienes that result from an unexpected selectivity for "inward" rotation of the phenyl and methyl groups. With 1-ethoxycarbonyl-4-phenylcyclobutene, "outward" rotation of the phenyl group occurs exclusively. Density functional theory was used to investigate the role of the 3,3-geminal diester groups and the origin of torquoselectivity in these electrocyclic reactions. The rules of torquoselectivity still hold, with a calculated 6-8 kcal/mol preference for outward rotation of the methyl and phenyl substituents. However, cyclization of the "out" dienes to pyran intermediates allows for isomerization and thermodynamic control of stereoselectivity.
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Affiliation(s)
- Joann M. Um
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569
| | - Huadong Xu
- The School of Pharmacy, University of Wisconsin, Madison, Wisconsin 53705-2222
| | - K. N. Houk
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569
| | - Weiping Tang
- The School of Pharmacy, University of Wisconsin, Madison, Wisconsin 53705-2222
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24
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Riu A, Harrison-Marchand A, Maddaluno J, Gulea M, Albadri H, Masson S. A Domino Knoevenagel/1,6-Heteroelectrocyclization Sequence to Access Phosphono-2H-thiopyrans. European J Org Chem 2007. [DOI: 10.1002/ejoc.200700422] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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25
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Abstract
Four reaction pathways from diborane and ammonia to borazine, (HBNH)3, have been studied computationally at the density functional level (B3LYP/6-311+G(2d,p)//B3LYP/6-31G(d)). The cycloaddition of H2BNH2 to 1,3-diaza-2,4-diborabuta-1,3-diene and subsequent elimination of two molecules of H2 was found to be the lowest-energy pathway to (HBNH)3. In the other pathways, the formation and conversion of the intermediates 1,3,5-triaza-2,4,6-triborahexatriene, cyclotriborazane, and 1,3,5-triaza-2,4,6-triborahexa-1,5-diene into (HBNH)3 were investigated. The formation of 1,3-diaza-2,4-diborabuta-1,3-diene and, subsequently, the formation and electrocyclization of 1,3,5-triaza-2,4,6-triborahexatriene and the cycloaddition of H2BNH2 to 1,3-diaza-2,4-diborabuta-1,3-diene are predicted to be the kinetically favored pathways to (HBNH)3 in the gas phase. At low concentrations of 1,3-diaza-2,4-diborabutene, high concentrations of H2BNH2, and a temperature of 298.15 K, the formation of the polyolefins H3BNH2(H2BNH2)nNHBH2 (n=1,2) is predicted to be competitive with the formation of 1,3-diaza-2,4-diborabuta-1,3-diene.
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Affiliation(s)
- W Rodger Nutt
- Department of Chemistry, Martin Chemical Laboratory, Davidson College, Davidson, North Carolina 28035, USA.
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26
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Affiliation(s)
- Mitsuru Shoji
- Department of Industrial Chemistry, Faculty of Engineering, Tokyo University of Science, Kagurazaka, Shinjuku‐ku, Tokyo 162‐8601, Japan
| | - Yujiro Hayashi
- Department of Industrial Chemistry, Faculty of Engineering, Tokyo University of Science, Kagurazaka, Shinjuku‐ku, Tokyo 162‐8601, Japan
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27
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Yu TQ, Fu Y, Liu L, Guo QX. How to promote sluggish electrocyclization of 1,3,5-hexatrienes by captodative substitution. J Org Chem 2007; 71:6157-64. [PMID: 16872200 DOI: 10.1021/jo060885i] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hexatriene electrocyclization, if not disfavored by its harsh reaction conditions, can be highly useful for the synthesis of complex organic molecules. Herein we developed a two-layer ONIOM method which could predict the activation free energy of hexatriene electrocyclization with an accuracy of about 1.0 kcal/mol. Using this carefully benchmarked method, we calculated the activation free energies for a variety of substituted hexatrienes. It was found that extraordinarily rapid electrocyclization could occur for certain patterns of captodative substituted hexatrienes, including 2-acceptor-3-donor hexatrienes, 2-acceptor-5-donor hexatrienes, and 3-acceptor-5-donor hexatrienes. The activation free energies for these systems could be up to 10 kcal/mol lower than that of the unsubstituted hexatriene, and therefore, their electrocyclization could proceed smoothly even at room temperature. The mechanism for the captodative effect on hexatriene electrocyclization could be understood by calculating the affinity between the donor and acceptor group in the reactant state and transition state of the reaction. If the affinity was stronger in the transition state, captodative substitution would produce an extra acceleration effect. It was shown that our theoretical results were in excellent agreement with the experimental data from the recent synthetic studies of hexatriene electrocyclizations. Thus, the theoretical tools developed in the present study could be used to predict not only how to accelerate the hexatriene electrocyclization via substituent manipulation but also under what conditions each particular electrocyclization could be accomplished in the real experiment.
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Affiliation(s)
- Tang-Qing Yu
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, China
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28
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Cabaleiro-Lago EM, Rodríguez-Otero J, González-López I, Peña-Gallego A, Hermida-Ramón JM. A DFT study of the pericyclic/pseudopericyclic character of cycloaddition reactions of ethylene and formaldehyde to buta-1,3-dien-1-one and derivatives. J Phys Chem A 2007; 109:5636-44. [PMID: 16833896 DOI: 10.1021/jp050624x] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cycloaddition reactions of ethylene and formaldehyde to buta-1,3-dien-1-one and derivatives were studied by performing a density functional theory study with the 6-31+G* basis set. Reactants, products, and transition states for each reaction were localized, and the path connecting reactants and products was also obtained. Magnetic properties were evaluated along the reaction path to elucidate the characteristics of the reactions studied. Also, a natural bond orbital analysis was performed to study the orbital interactions in the transition states. Calculations indicate that all reactions are pericyclic except three cases, which are pseudopericyclic reactions. In the latter, transition states are almost planar, and magnetic properties do not reveal aromatization enhancement in their transition states. Also, though the participation of lone pairs diminish the pericyclic character of the reactions, sometimes this participation is not enough to generate a change to a pseudopericyclic path. Overall, magnetic properties reveal as a good criterion to elucidate the characteristics of the reactions studied, though a combined application of several criteria is recommended.
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Affiliation(s)
- Enrique M Cabaleiro-Lago
- Departamento de Química Física, Facultade de Ciencias, Universidade de Santiago, Campus de Lugo, Avda. Alfonso X El Sabio s/n, 27002 Lugo, Spain.
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29
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Tocher DA, Drew MGB, Nag S, Pal PK, Datta D. Metallo-Organic Domino Reactions: CH versus CC Bond Breaking. Chemistry 2007; 13:2230-7. [PMID: 17171727 DOI: 10.1002/chem.200600199] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
HL and MeL are prepared by condensing benzil dihydrazone with 2-formylpyridine and 2-acetylpyridine, respectively, in 1:2 molar proportions. While in a reaction with [Ru(C(6)H(6))Cl(2)]2, HL yields the cation [Ru(C(6)H(6)){5,6-diphenyl-3-(pyridin-2-yl)-1,2,4-triazine}Cl]+, MeL gives the cation [Ru(C(6)H(6))(MeL)Cl]+. Both the cations are isolated as their hexafluorophosphate salts and characterised by X-ray crystallography. In the case of HL, double domino electrocyclic/elimination reactions are found to occur. The electrocyclic reaction occurs in a C=N-N=C-C=N fragment of HL and the elimination reaction involves breaking of a C-H bond of HL. Density functional calculations on model complexes indicate that the identified electrocyclic reaction is thermochemically as well as kinetically feasible for both HL and MeL in the gas phase. For a double domino reaction, similar to that operative in HL, to occur for MeL, breaking of a C-C bond would be required in the elimination step. Our model calculations show the energy barrier for this elimination step to be much higher (329.1 kJ mol(-1)) for MeL than that for HL (96.3 kJ mol(-1)). Thus, the domino reaction takes place for HL and not for MeL. This accounts for the observed stability of [Ru(C(6)H(6))(MeL)Cl]+ under the reaction conditions employed.
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Affiliation(s)
- Derek A Tocher
- Department of Chemistry, University College London, 20 Gordon Street, London WC1H 0 AJ, UK
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30
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Alajarín M, Ortín MM, Sanchez-Andrada P, Vidal A. Tandem Pseudopericyclic Reactions: [1,5]-X Sigmatropic Shift/6π-Electrocyclic Ring Closure Converting N-(2-X-Carbonyl)phenyl Ketenimines into 2-X-Quinolin-4(3H)-ones. J Org Chem 2006; 71:8126-39. [PMID: 17025302 DOI: 10.1021/jo061286e] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
N-(2-X-Carbonyl)phenyl ketenimines undergo, under mild thermal conditions, [1,5]-migration of the X group from the carbonyl carbon to the electron-deficient central carbon atom of the ketenimine fragment, followed by a 6pi-electrocyclic ring closure of the resulting ketene to provide 2-X-substituted quinolin-4(3H)-ones in a sequential one-pot manner. The X groups tested are electron-donor groups, such as alkylthio, arylthio, arylseleno, aryloxy, and amino. When involving alkylthio, arylthio, and arylseleno groups, the complete transformation takes place in refluxing toluene, whereas for aryloxy and amino groups the starting ketenimines must be heated at 230 degrees C in a sealed tube in the absence of solvent. The mechanism for the conversion of these ketenimines into quinolin-4(3H)-ones has been studied by ab initio and DFT calculations, using as model compounds N-(2-X-carbonyl)vinyl ketenimines bearing different X groups (X = F, Cl, OH, SH, NH(2), and PH(2)) converting into 4(3H)-pyridones. This computational study afforded two general reaction pathways for the first step of the sequence, the [1,5]-X shift, depending on the nature of X. When X is F, Cl, OH, or SH, the migration occurs in a concerted mode, whereas when X is NH(2) or PH(2), it involves a two-step sequence. The order of migratory aptitudes of the X substituents at the acyl group is predicted to be PH(2) > Cl > SH > NH(2) > F> OH. The second step of the full transformation, the 6pi-electrocyclic ring closure, is calculated to be concerted and with low energy barriers in all the cases. We have included in the calculations an alternative mode of cyclization of the N-(2-X-carbonyl)vinyl ketenimines, the 6pi-electrocyclic ring closure leading to 1,3-oxazines that involves its 1-oxo-5-aza-1,3,5-hexatrienic system. Additionally, the pseudopericyclic topology of the transition states for some of the [1,5]-X migrations (X = F, Cl, OH, SH), for the 6pi-electrocyclization of the ketene intermediates to the 4(3H)-pyridones, and for the 6pi-electrocyclization of the starting ketenimines into 1,3-oxazines could be established on the basis of their geometries, natural bond orbital analyses, and magnetic properties. The calculations predict that the 4(3H)-pyridones are the thermodynamically controlled products and that the 1,3-oxazines should be the kinetically controlled ones.
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Affiliation(s)
- Mateo Alajarín
- Departamento de Química Organica, Facultad de Química, Campus de Espinardo, Universidad de Murcia, 30100 Murcia, Spain
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31
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Chen Z, Wannere CS, Corminboeuf C, Puchta R, Schleyer PVR. Nucleus-independent chemical shifts (NICS) as an aromaticity criterion. Chem Rev 2005; 105:3842-88. [PMID: 16218569 DOI: 10.1021/cr030088+] [Citation(s) in RCA: 2284] [Impact Index Per Article: 120.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zhongfang Chen
- Computational Chemistry Annex, The University of Georgia, Athens, GA 30602-2525, USA.
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32
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Shoji M, Uno T, Kakeya H, Onose R, Shiina I, Osada H, Hayashi Y. Enantio- and Diastereoselective Total Synthesis of EI-1941−1, −2, and −3, Inhibitors of Interleukin-1β Converting Enzyme, and Biological Properties of Their Derivatives. J Org Chem 2005; 70:9905-15. [PMID: 16292821 DOI: 10.1021/jo0516436] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
[reaction: see text] The first asymmetric total synthesis of EI-1941-1, -2, and -3, inhibitors of the interleukin-1beta converting enzyme (ICE), has been accomplished, starting from a chiral epoxy iodoquinone 11, a key intermediate in our total synthesis of epoxyquinols A and B. Despite a failure to synthesize the inhibitors by our postulated biosynthetic route, we were able to diastereoselectively synthesize them via an intramolecular carboxypalladation with the key steps being a 6-endo cyclization mode followed by beta-hydride elimination. The investigation of the biological properties of EI-1941-1, -2, and -3 and their derivatives disclosed them to be potent and effective ICE inhibitors with less cytotoxicity than EI-1941-1 and -2 in a cultured cell system.
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Affiliation(s)
- Mitsuru Shoji
- Department of Industrial Chemistry, Faculty of Engineering, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
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33
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Cabaleiro-Lago EM, Rodríguez-Otero J, Varela-Varela SM, Peña-Gallego A, Hermida-Ramón JM. Are Electrocyclization Reactions of (3Z)-1,3,5-Hexatrienone and Nitrogen Derivatives Pseudopericyclic? A DFT Study. J Org Chem 2005; 70:3921-8. [PMID: 15876080 DOI: 10.1021/jo0477695] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
[reactions: see text] Electrocyclization reactions of (3Z)-1,3,5-hexatrienone and nitrogen derivatives were studied by performing density functional theory (DFT) calculations together with the 6-31+G* basis set. Reactants, products, and transition states for each reaction were localized and the IRC connecting reactants and products was also obtained. Magnetic properties were evaluated along the reaction path to elucidate the characteristics of the reactions studied. As obtained from the calculations, electrocyclization of (3Z)-1,3,5-hexatrienone is a pericyclic process, as indicated by a variety of indexes, such as Nucleus Independent Chemical Shift (NICS), anisotropy of the magnetic susceptibility, or anisotropy of the current-induced density (ACID). This reaction presents characteristics of pericyclic reactions despite the activation energy lowering relative to the electrocyclization of (4Z)-1,2,4,6-heptatetraene, and the relatively small NICS values observed in the transition state. Magnetic properties indicate that an enhancement of the aromaticity relative to reactants and products occurs revealing the absence of orbital disconnections on the cyclic loop of interacting orbitals. Only two reactions among those studied exhibit pseudopericyclic character due to the in-plane attack of the lone pair on nitrogen. In these cases, the reactions showed no barrier for the electrocyclization process, and no aromaticity enhancement was observed.
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Affiliation(s)
- Enrique M Cabaleiro-Lago
- Departamento de Química Física, Facultade de Ciencias, Universidade de Santiago de Compostela, Campus de Lugo, Avda. Alfonso X o Sabio s/n, 27002 Lugo, Spain.
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34
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Shoji M, Imai H, Mukaida M, Sakai K, Kakeya H, Osada H, Hayashi Y. Total Synthesis of Epoxyquinols A, B, and C and Epoxytwinol A and the Reactivity of a 2H-Pyran Derivative as the Diene Component in the Diels−Alder Reaction. J Org Chem 2004; 70:79-91. [PMID: 15624908 DOI: 10.1021/jo048425h] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Full details of two versions of the total synthesis of epoxyquinols A, B, and C and epoxytwinol A (RKB-3564D) are described. In the first-generation synthesis, the HfCl(4)-mediated diastereoselective Diels-Alder reaction of furan with Corey's chiral auxiliary has been developed. In the second-generation synthesis, a chromatography-free preparation of an iodolactone, by using acryloyl chloride as the dienophile in the Diels-Alder reaction of furan, and the lipase-mediated kinetic resolution of a cyclohexenol derivative have been developed. This second-generation synthesis is suitable for large-scale preparation. A biomimetic cascade reaction involving oxidation, 6pi-electrocyclization, and then Diels-Alder dimerization is the key reaction in the formation of the complex heptacyclic structure of epoxyquinols A, B, and C. Epoxytwinol A is synthesized by the cascade reaction composed of oxidation, 6pi-electrocyclization, and formal [4 + 4] cycloaddition reactions. A 2H-pyran, generated by oxidation/6pi-electrocyclization, acts as a good diene, reacting with several dienophiles to afford polycyclic compounds in one step. An azapentacyclic compound is synthesized by a similar cascade reaction composed of the four successive steps: oxidation, imine formation, 6pi-azaelectrocyclization, and Diels-Alder dimerization.
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Affiliation(s)
- Mitsuru Shoji
- Department of Industrial Chemistry, Faculty of Engineering, Department of Applied Chemistry, Faculty of Science, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
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35
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Goumans TPM, Ehlers AW, Lammertsma K, Würthwein EU, Grimme S. Improved Reaction and Activation Energies of [4+2] Cycloadditions, [3,3] Sigmatropic Rearrangements and Electrocyclizations with the Spin-Component-Scaled MP2 Method. Chemistry 2004; 10:6468-75. [PMID: 15540273 DOI: 10.1002/chem.200400250] [Citation(s) in RCA: 64] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
A new quantum mechanical scheme to calculate electronic correlation energies, spin-component-scaled MP2, was tested as a tool to predict reaction energies and barriers in computational organic chemistry. Three common pericyclic reactions with known unsatisfactory MP2 descriptions were reinvestigated with the modified MP2 approach, in which the parallel and anti-parallel spin components of the correlation energy are scaled separately. The SCS-MP2 calculated reaction and activation energies of nine Diels-Alder reactions, four [3,3] sigmatropic rearrangements, and ten electrocyclization reactions are compared to those of the MP2, B3 LYP, QCISD(T), and G3 methods. For each, the SCS-MP2 results are in excellent agreement with the experimental data and compare far more favorably to G3 than both MP2 and B3 LYP. Careful evaluation of the effect of the size of the atomic orbital (AO) basis set shows that the larger expansions improve the agreement with experiment for the SCS-MP2 method, while they get worse for both MP2 and B3 LYP.
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Affiliation(s)
- T P M Goumans
- Department of Organic and Inorganic Chemistry, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands
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36
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Peña-Gallego A, Rodríguez-Otero J, Cabaleiro-Lago EM. A DFT Study of the Boulton−Katritzky Rearrangement of (5R)-4-Nitrosobenz[c]isoxazole and Its Anion: Pseudopericyclic Reactions with Aromatic Transition States. J Org Chem 2004; 69:7013-7. [PMID: 15471446 DOI: 10.1021/jo0491509] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The nature of the Boulton-Katritzky rearrangement of (5R)-4-nitrosobenz[c]isoxazole and its anion was studied employing three methodologies: calculation of magnetic properties (magnetic susceptibility, magnetic susceptibility anisotropy, and the nucleus-independent chemical shifts), the natural bonding orbital analysis, and the ACID (anisotropy of the current-induced density) method. The deep analysis of the results indicates a pseudopericyclic character for these reactions despite the aromaticity of the transition states.
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Affiliation(s)
- Angeles Peña-Gallego
- Departamento de Química Física, Facultade de Química, Universidade de Santiago de Compostela, Avda das Ciencias s/n. 15782, Santiago de Compostela, Spain
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37
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Montero-Campillo MM, Rodríguez-Otero J, Cabaleiro-Lago EM. Ab Initio and DFT Study of the Reaction Mechanism of Diformylketene with Formamide. J Phys Chem A 2004. [DOI: 10.1021/jp048672p] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- M. Merced Montero-Campillo
- Departamento de Química Física, Facultade de Química, Universidade de Santiago de Compostela, Avda das Ciencias s/n. 15782, Santiago de Compostela, Spain, and Departamento de Química Física, Facultade de Ciencias, Universidade de Santiago, Campus de Lugo, Avda. Alfonso X El Sabio s/n, 27002 Lugo, Spain
| | - Jesús Rodríguez-Otero
- Departamento de Química Física, Facultade de Química, Universidade de Santiago de Compostela, Avda das Ciencias s/n. 15782, Santiago de Compostela, Spain, and Departamento de Química Física, Facultade de Ciencias, Universidade de Santiago, Campus de Lugo, Avda. Alfonso X El Sabio s/n, 27002 Lugo, Spain
| | - Enrique M. Cabaleiro-Lago
- Departamento de Química Física, Facultade de Química, Universidade de Santiago de Compostela, Avda das Ciencias s/n. 15782, Santiago de Compostela, Spain, and Departamento de Química Física, Facultade de Ciencias, Universidade de Santiago, Campus de Lugo, Avda. Alfonso X El Sabio s/n, 27002 Lugo, Spain
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38
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Nicolaou KC, Sasmal PK, Xu H. Biomimetically Inspired Total Synthesis and Structure Activity Relationships of 1-O-Methyllateriflorone. 6π Electrocyclizations in Organic Synthesis. J Am Chem Soc 2004; 126:5493-501. [PMID: 15113221 DOI: 10.1021/ja040037+] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The total synthesis of 1-O-methyllateriflorone (2) is described. The construction of the cage-like domain of the molecule involved a biomimetic Claisen/Diels-Alder cascade, whereas the novel spiroxalactone framework was generated by an intramolecular Michael reaction within precursor 16a involving the carboxylate residue as the nucleophile. This finding might bear on the biosynthetic pathway by which nature forms lateriflorone. Described herein is also an interesting cascade sequence involving facile 6 pi electrocyclizations which leads to complex benzopyran systems. The biological evaluation of a small library of lateriflorone analogues and related systems establishing the first SAR within this class of compounds is also included. Among the most active compounds against tumor cells are 2, 16b, 56, 58, and 59.
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Affiliation(s)
- K C Nicolaou
- Department of Chemistry and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA.
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39
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Shoji M, Imai H, Shiina I, Kakeya H, Osada H, Hayashi Y. Different Reaction Modes for the Oxidative Dimerization of Epoxyquinols and Epoxyquinones. Importance of Intermolecular Hydrogen-Bonding. J Org Chem 2004; 69:1548-56. [PMID: 14987010 DOI: 10.1021/jo0355303] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
An oxidative dimerization reaction, involving the three successive steps of oxidation, 6 pi-electrocyclization, and Diels-Alder reaction, has been experimentally and theoretically investigated for the three 2-alkenyl-3-hydroxymethyl-2-cyclohexen-1-one derivatives epoxyquinol 3, epoxyquinone 6, and cyclohexenone 10. Of the sixteen possible modes of the oxidation/6 pi-electrocylization/Diels-Alder reaction cascade for the epoxyquinone 6, and eight for the cyclohexenone 10, only the endo-anti(epoxide)-anti(Me)-hetero and endo-anti(Me)-hetero modes are, respectively, observed, while both endo-anti(epoxide)-anti(Me)-hetero and exo-anti(epoxide)-anti(Me)-homo reaction modes occur with the epoxyquinol 3. Intermolecular hydrogen-bonding is found to be the key cause of formation of both epoxyquinols A and B with 3, although epoxyquinone 6 and cyclohexenone 10 both gave selectively only the epoxyquinol A-type product. In the dimerization of epoxyquinol 3, two monomer 2H-pyrans 5 interact with each other to afford intermediate complex 28 or 29 stabilized by hydrogen-bonding, from which Diels-Alder reaction proceeds. Theoretical calculations have also revealed the differences in the reaction profiles of epoxyquinone 6 and cyclohexenone 10. Namely, the rate-determining step of the former is the Diels-Alder reaction, while that of the latter is the 6 pi-electrocyclization.
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Affiliation(s)
- Mitsuru Shoji
- Department of Industrial Chemistry, Faculty of Engineering, Tokyo University of Science, Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
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Davies IW, Marcoux JF, Kuethe JT, Lankshear MD, Taylor JDO, Tsou N, Dormer PG, Hughes DL, Houk KN, Guner V. Demonstrating the Synergy of Synthetic, Mechanistic, and Computational Studies in a Regioselective Aniline Synthesis. J Org Chem 2004; 69:1298-308. [PMID: 14961684 DOI: 10.1021/jo035677u] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Tri- and tetrasubstituted anilines are formed in good to excellent yields by the addition of ketones to vinamidinium salts (up to 98%). The reaction proceeds via the formation of dienone intermediates, which react to form an enamine with the liberated amine. In the case of a nitro, or dimethylaminomethylene substituent, the enamines undergo a facile electrocyclic ring closure to form a cyclohexadiene, which goes on to form anilines with a high degree of selectivity (up to 50:1) with a minor competing pathway proceeding via the enol providing phenols. Competition experiments using isotopic substitution reveal that the rate determining step en route to dienone is enol/enolate addition to the vinamidinium salt, which is characterized by an inverse secondary isotope effect (k(H/D) 0.7-0.9). Computational studies have been used to provide a framework for understanding the reaction pathway. The original proposal for a [1,5]-H shift was ruled out on the basis of the calculations, which did not locate a thermally accessible transition state. The minimum energy conformation of the enamine is such that a facile electrocyclic ring closure is ensured, which is corroborated by the experimental studies. A framework for understanding the reaction pathway is presented.
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Affiliation(s)
- Ian W Davies
- Department of Process Research, Merck & Co., Inc., PO Box 2000, Rahway, New Jersey 07065-0900, USA.
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Li C, Johnson RP, Porco JA. Total synthesis of the quinone epoxide dimer (+)-torreyanic acid: application of a biomimetic oxidation/electrocyclization/Diels-Alder dimerization cascade. J Am Chem Soc 2003; 125:5095-106. [PMID: 12708860 DOI: 10.1021/ja021396c] [Citation(s) in RCA: 128] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
An asymmetric synthesis of the quinone epoxide dimer (+)-torreyanic acid (48) has been accomplished employing [4 + 2] dimerization of diastereomeric 2H-pyran monomers. Synthesis of the related monomeric natural product (+)-ambuic acid (2) has also been achieved which establishes the biosynthetic relationship between these two natural products. A tartrate-mediated nucleophilic epoxidation involving hydroxyl group direction facilitated the asymmetric synthesis of a key chiral quinone monoepoxide intermediate. Thermolysis experiments have also been conducted on a model dimer based on the torreyanic acid core structure and facile retro Diels-Alder reaction processes and equilibration of diastereomeric 2H-pyrans have been observed. Theoretical calculations of Diels-Alder transition states have been performed to evaluate alternative transition states for Diels-Alder dimerization of 2H-pyran quinone epoxide monomers and provide insight into the stereocontrol elements for these reactions.
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Affiliation(s)
- Chaomin Li
- Department of Chemistry, Boston University, 590 Commonwealth Avenue, Boston, Massachusetts 02215, USA
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Martell JM, Beaton PT, Holmes BE. Comparisons between Density Functional Theory and Conventional ab Initio Methods for 1,2-Elimination of HF from 1,1,1-Trifluoroethane: Test Case Study for HF Elimination from Fluoroalkanes. J Phys Chem A 2002. [DOI: 10.1021/jp020931s] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Jaime M. Martell
- Department of Chemistry, University of North Carolina at Asheville, One University Heights, Asheville, North Carolina 28804-8511
| | - Paul T. Beaton
- Department of Chemistry, University of North Carolina at Asheville, One University Heights, Asheville, North Carolina 28804-8511
| | - Bert E. Holmes
- Department of Chemistry, University of North Carolina at Asheville, One University Heights, Asheville, North Carolina 28804-8511
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Zhou C, Birney DM. A density functional theory study clarifying the reactions of conjugated ketenes with formaldimine. A plethora of pericyclic and pseudopericyclic pathways. J Am Chem Soc 2002; 124:5231-41. [PMID: 11982388 DOI: 10.1021/ja017559z] [Citation(s) in RCA: 80] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The reactions of vinylketene (1a), imidoylketene (1b), and formylketene (1c) with formaldimine (2) were studied at the B3LYP/6-31G* level. For the cycloadditions of these conjugated ketenes with 2, several possible pathways to both [4 + 2] and [2 + 2] products were examined. The lowest energy [2 + 2] pathways are, in most cases, calculated to be stepwise, forming the products via rate-determining conrotatory electrocyclization of zwitterionic intermediates. However, concerted transition structures analogous to the ketene plus ethene [2 + 2] cycloaddition reaction were also located; the existence of multiple transition states offers a resolution to a long-standing controversy regarding the mechanism of ketene plus imine cycloadditions. Both stepwise and concerted [4 + 2] pathways were calculated for 2b and for 2c; both these pathways are pseudopericyclic. The inherently low barriers associated with pseudopericyclic transition states provide an explanation of the experimental preference for [4 + 2] cycloadditions of alpha-oxoketenes and predict [4 + 2] cycloadditions should also be favored for imidoylketenes. For a vinylketene constrained to a Z-geometry, the concerted [4 + 2] cycloaddition is also predicted to be the lowest energy pathway. An explanation is offered for the unusual thermal equilibration from a six-membered ring (3d) to a four-membered ring (4d) observed by Sato et al. Transition structures for facile pseudopericyclic 1,3- and 1,5-hydrogen shifts in the zwitterions were also calculated.
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Affiliation(s)
- Chun Zhou
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas 79409-1061, USA
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-Otero JR, Cabaleiro-Lago EM. Electrocyclization of (Z)-1,2,4,6-Heptatetraene and its Heterosubstituted Analogues: Pericyclic or Pseudopericyclic? Angew Chem Int Ed Engl 2002. [DOI: 10.1002/1521-3757(20020402)114:7<1195::aid-ange1195>3.0.co;2-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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45
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Rodríguez-Otero J, Cabaleiro-Lago EM. Electrocyclization of (Z)-1,2,4,6-heptatetraene and its heterosubstituted analogues: pericyclic or pseudopericyclic? Angew Chem Int Ed Engl 2002; 41:1147-50; author reply 1150-2. [PMID: 12491242 DOI: 10.1002/1521-3773(20020402)41:7<1147::aid-anie1147>3.0.co;2-j] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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46
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Tanaka K, Mori H, Yamamoto M, Katsumura S. Significant acceleration of 6 pi-azaelectrocyclization resulting from a remarkable substituent effect and formal synthesis of the ocular age pigment A2-E by a new method for substituted pyridine synthesis. J Org Chem 2001; 66:3099-110. [PMID: 11325275 DOI: 10.1021/jo005779+] [Citation(s) in RCA: 111] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The remarkable acceleration of 6 pi-azaelectrocyclization due to the combination of the C4-carbonyl and the C6-alkenyl or phenyl substituents in 1-azatrienes was found. This observation was rationalized by considering the remarkable orbital interaction between the HOMO and LUMO of 1-azatrienes, which were obtained by molecular orbital calculations. The formal synthesis of the unusual retinal metabolite, A2-E, was achieved by two types of the new one-pot synthesis of substituted pyridines by utilizing the obtained facile 6 pi-azaelectrocyclization, one of which is compatible with the proposed metabolic pathway of A2-E.
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Affiliation(s)
- K Tanaka
- School of Science, Kwansei Gakuin University, Uegahara, Nishinomiya, Hyogo 662-8501, Japan
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