Rapid Solid-Phase Syntheses of Conjugated Homooligomers and [AB] Alternating Block Cooligomers of Precise Length and Constitution

Hierarchical Nanomaterials Assembled from Peptoids and Other Sequence-Defined Synthetic Polymers

In nature, the self-assembly of sequence-specific biopolymers into hierarchical structures plays an essential role in the construction of functional biomaterials. To develop synthetic materials that can mimic and surpass the function of these natural counterparts, various sequence-defined bio- and biomimetic polymers have been developed and exploited as building blocks for hierarchical self-assembly. This review summarizes the recent advances in the molecular self-assembly of hierarchical nanomaterials based on peptoids (or poly-N-substituted glycines) and other sequence-defined synthetic polymers. Modern techniques to monitor the assembly mechanisms and characterize the physicochemical properties of these self-assembly systems are highlighted. In addition, discussions about their potential applications in biomedical sciences and renewable energy are also included. This review aims to highlight essential features of sequence-defined synthetic polymers (e.g., high stability and protein-like high-information content) and how these unique features enable the construction of robust biomimetic functional materials with high programmability and predictability, with an emphasis on peptoids and their self-assembled nanomaterials.

A review of oligo(arylene ethynylene) derivatives in molecular junctions

Oligo(arylene ethynylene) (OAE) derivatives are the "workhorse" molecules of molecular electronics. Their ease of synthesis and flexibility of functionalisation mean that a diverse array of OAE molecular wires have been designed, synthesised and studied theoretically and experimentally in molecular junctions using both single-molecule and ensemble methods. This review summarises the breadth of molecular designs that have been investigated with emphasis on structure-property relationships with respect to the electronic conductance of OAEs. The factors considered include molecular length, connectivity, conjugation, (anti)aromaticity, heteroatom effects and quantum interference (QI). Growing interest in the thermoelectric properties of OAE derivatives, which are expected to be at the forefront of research into organic thermoelectric devices, is also explored.

Polymer-supported syntheses of thiophene-containing compounds using a new type of traceless linker

A new type of traceless linker is described for use in polymer-supported (PS) syntheses of thiophene-containing compounds. It is based on the cleavage of PS aryl 2-thienyl ketones by a mixture of potassium t-butoxide and water (typical mol ratio 10:3) in an ethereal solvent. Cleavage occurs to give the soluble thiophene-containing product. The method is used to prepare a range of eight thiophene-containing compounds including a terthiophene and a dialkylquaterthiophene. PS unsymmetrical diaryl ketones incorporating, for example, ortho-methoxyphenyl or pyrrole moieties could also serve as traceless linkers.

Ferrocene and maleimide-functionalized disulfide scaffolds for self-assembled monolayers on gold

A series of ferrocene-based electroactive molecules (EAMs) containing maleimide and disulfide groups in different asymmetric and branched architectures were designed and synthesized. Stable monolayers of each EAM on gold electrodes were confirmed by cyclic voltammetry. Importantly, these EAMs expand the repertoire of monolayer building blocks amenable to modular biofunctionalization for applications in electrochemical biosensor fabrication.

Synthesis of functional molecular rod oligomers

We are presenting the synthesis of a phenylene ethynylene-based rod containing an Fmoc protected amino group and an activated acid which can be applied to peptide couplings. This linear amino acid analogue is applied to the synthesis of di-, tri- and pentamers. The pentamer has a molecular mass of 6.5 kDa and is characterized by (1)H NMR spectroscopy and MALDI-TOF MS. The method has potential for the formation of long macromolecular oligomers.

Solid-phase synthesis of solanesol

An efficient and convergent solid-phase strategy for the total synthesis of All- E solanesol is described. This method features avoidance of iterative and difficult purifications comparing with solution-phase synthesis and is suitable for the preparation of other oligoprenols.

Unique domain structure of pi-conjugated tolanethioacetate self-assembled monolayers on Au(111)

Surface structures of tolanethioacetate (TTA) self-assembled monolayers (SAMs) on Au(111), formed in a 0.5mM N,N'-dimethylformamide (DMF) solution, were investigated as a function of solution temperature by scanning tunneling microscopy (STM). The STM study revealed that thioacetyl-terminated TTA molecules on Au(111) did not form ordered SAMs at room temperature and 80 degrees C, whereas the adsorption of TTA molecules on Au(111) at a solution temperature of 50 degrees C led to the formation of two mixed phases: a disordered phase and a unique ordered phase, consisting rod-like domains, which can be described as a ( radical6x radical13)15 degrees superstructure. From this study, it was demonstrated that solution temperature is a key factor controlling the two-dimensional SAM structure of TTA molecules.

Towards a general solid phase approach for the iterative synthesis of conjugated oligomers using a germanium based linker - first solid phase synthesis of an oligo-(triarylamine)

The development of a germanium-based linker system for the solid phase synthesis (SPS) of 3-(n-hexyl)thiophene oligomers and the first SPS of triarylamine oligomers via iterative chain extension is described. The efficiency of the key steps in the oligomer syntheses and their compatibility with the germanium linker are demonstrated by the SPS of bi-[3-(n-hexyl)thiophene] 19 and ter-(triarylamine) 50. The use of a germanium-based linker in combination with appropriately selected silicon-based blocking/protecting groups allows double coupling to drive the key cross coupling steps to completion hence minimising deletion sequences and also allows for traceless and potentially functionalisative cleavage from the resin. The latter feature has yet to be fully explored but towards this end the first ipso-borodegermylation reaction of a 2-germyl-3-(n-hexyl)thiophene is presented.

Giantmeso-meso-Linked Porphyrin Arrays of Micrometer Molecular Length and Their Fabrication

On the basis of the Ag(I)-promoted coupling reaction of zinc(II)-5,15-bis(3,5-dioctyloxyphenyl)porphyrin Z1, chain elongation has been attempted by using a stepwise doubling approach, which provides Z2, Z4, Z8, Z16, Z32, Z64, Z128, Z256, Z384, and Z512. The porphyrin arrays up to Z128 are sufficiently soluble in CHCl3 and THF despite their very long molecular lengths and rodlike structures, while the arrays over Z128 show a significant drop in solubility and stability. The discrete porphyrin arrays thus isolated were characterized by means of (1)H NMR spectroscopy, matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry, UV/Vis spectroscopy, gel-permeation chromatography (GPC), cyclic voltammetry (CV), single-crystal X-ray crystallography, scanning tunneling microscopy (STM), and atomic force microscopy (AFM). Contrary to expected linear conformations of the arrays Z n (where n is the number of porphyrins), the single molecular images of Z128, Z256, and Z512 revealed largely bent structures; this finding indicates the substantial conformational flexibility of Z n. We also exploited an effective synthetic route by means of which Z n can be fabricated with a thiol-protected aryl group to provide Z n S(2) through Z n Br(2), by bromination with N-bromosuccinimide and subsequent Pd-catalyzed Suzuki-Miyaura arylation. Finally, the reaction of Z256 provided Z512, Z768, and Z1024. Collectively, this work provides an important milestone in the preparation of sub-microscale discrete organic molecules and the fabrication of molecular-based materials, hence significantly contributing to device applications.

Tracelessness Unmasked: A General Linker Nomenclature

Nowadays it is rare to find an issue of a major chemistry journal without at least one article on solid-phase synthesis. This is hardly surprising: the technique promises an end to arduous work-up procedures and the ability to facilitate the creation of vast libraries of compounds using combinatorial techniques. No longer is the technique only of interest to those involved in peptide synthesis: an enormous variety of product classes have now been prepared on and isolated from the solid phase. It is the "linker" which is the focus of this article. The linker's ultimate function is to release a product from the support into solution: it does this, without exception, with a chemical change to the product at the former linkage site. Some linkers, apparently, are "traceless". But what, in fact, is "tracelessness"? Twenty years ago, in a climate where cleavage of a linker resulted in formation of a polar carboxylic acid as the vestige of the support, the concept was attractive. Today the chemist is faced with a myriad of novel linkers which have the ability to release products bearing most major functionalities at the former linkage site and we will argue here that the term "traceless", although currently in widespread use, is meaningless. Instead, we propose a new categorization of linkers based on the functionality they release upon cleavage, and suggest a nomenclature to underpin this categorization. We anticipate that the article will also serve to highlight areas of linker technology in need of further research.

Electronics using hybrid-molecular and mono-molecular devices

The semiconductor industry has seen a remarkable miniaturization trend, driven by many scientific and technological innovations. But if this trend is to continue, and provide ever faster and cheaper computers, the size of microelectronic circuit components will soon need to reach the scale of atoms or molecules--a goal that will require conceptually new device structures. The idea that a few molecules, or even a single molecule, could be embedded between electrodes and perform the basic functions of digital electronics--rectification, amplification and storage--was first put forward in the mid-1970s. The concept is now realized for individual components, but the economic fabrication of complete circuits at the molecular level remains challenging because of the difficulty of connecting molecules to one another. A possible solution to this problem is 'mono-molecular' electronics, in which a single molecule will integrate the elementary functions and interconnections required for computation.

Photophysics and electron transfer in poly(3-octylthiophene) alternating with Ru(II)- and Os(II)-bipyridine complexes

A series of soluble metal-organic polymers that contain Ru(II)- and Os(II)-polypyridine complexes interspersed within a pi-conjugated poly(3-octylthiophene) backbone are prepared. Detailed electrochemical and photophysical studies are carried out on the polymers and two model complexes to determine the extent that the metal-polypyridine units interact with the pi-conjugated system. The results indicate that there is a strong electronic interaction between the metal-based chromophores and the pi-conjugated organic segments, and consequently the photophysical properties are not simply based on the sum of the properties of the individual components. In the Ru(II) polymers, the metal-to-ligand charge-transfer (MLCT) excited state is slightly higher in energy than the 3 pi,pi* state of the poly(3-octylthiophene) backbone. This state ordering results in a material that displays only a weak MLCT luminescence and a long-lived transient absorption spectrum that is dominated by the 3 pi,pi* state. In the Os(II) polymer the MLCT state is lower in energy than the polythiophene-based 3 pi,pi* state and the "unperturbed" MLCT emission is observed. Finally, all of the metal-organic polymers undergo photoinduced bimolecular electron-transfer (ET) reactions with the oxidative quencher dimethyl viologen. Transient absorption spectroscopy reveals that photoinduced ET to dimethyl viologen produces the oxidized polymers, and in most cases, the transient spectra are dominated by features characteristic of a poly(3-octylthiophene) polaron.