1
|
Gau D, Nougué R, Saffon-Merceron N, Baceiredo A, De Cózar A, Cossío FP, Hashizume D, Kato T. Donor-Stabilized 1,3-Disila-2,4-diazacyclobutadiene with a Nonbonded Si⋅⋅⋅Si Distance Compressed to a Si=Si Double Bond Length. Angew Chem Int Ed Engl 2016; 55:14673-14677. [PMID: 27763730 DOI: 10.1002/anie.201608416] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Indexed: 11/06/2022]
Abstract
A donor-stabilized 1,3-disila-2,4-diazacyclobutadiene presents an exceptionally short nonbonded Si⋅⋅⋅Si distance (2.23 Å), which is as short as that of Si=Si bonds (2.15-2.23 Å). Theoretical investigations indicate that there is no bond between the two silicon atoms, and that the unusual geometry can be related to a significant coulomb repulsion between the two ring nitrogen atoms. This chemical pressure phenomenon could provide an alternative and superior way of squeezing out van der Waals space in highly strained structures, as compared to the classical physical methods.
Collapse
Affiliation(s)
- David Gau
- Université de Toulouse, UPS, and CNRS, LHFA UMR 5069, 118 route de Narbonne, 31062, Toulouse cedex 9, France
| | - Raphael Nougué
- Université de Toulouse, UPS, and CNRS, LHFA UMR 5069, 118 route de Narbonne, 31062, Toulouse cedex 9, France
| | | | - Antoine Baceiredo
- Université de Toulouse, UPS, and CNRS, LHFA UMR 5069, 118 route de Narbonne, 31062, Toulouse cedex 9, France
| | - Abel De Cózar
- Universidad del País Vasco, Euskal Herriko Unibertsitatea Facultad de Química and Centro de Innovación en Química Avanzada (ORFEO-CINQA), 1072, San Sebastián-Donostia, Spain.,Donostia International Physics Center (DIPC), 20018, San Sebastián-Donostia, Spain.,IKERBASQUE, Basque Foundation for Science, 48013, Bilbao, Spain
| | - Fernando P Cossío
- Universidad del País Vasco, Euskal Herriko Unibertsitatea Facultad de Química and Centro de Innovación en Química Avanzada (ORFEO-CINQA), 1072, San Sebastián-Donostia, Spain.,Donostia International Physics Center (DIPC), 20018, San Sebastián-Donostia, Spain
| | - Daisuke Hashizume
- Materials Characterization Support Unit, RIKEN Center for Emergent Matter Science (CEMS), Wako, Saitama, 351-0198, Japan
| | - Tsuyoshi Kato
- Université de Toulouse, UPS, and CNRS, LHFA UMR 5069, 118 route de Narbonne, 31062, Toulouse cedex 9, France
| |
Collapse
|
2
|
Gau D, Nougué R, Saffon-Merceron N, Baceiredo A, De Cózar A, Cossío FP, Hashizume D, Kato T. Donor-Stabilized 1,3-Disila-2,4-diazacyclobutadiene with a Nonbonded Si⋅⋅⋅Si Distance Compressed to a Si=Si Double Bond Length. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201608416] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- David Gau
- Université de Toulouse; UPS, and CNRS, LHFA UMR 5069; 118 route de Narbonne 31062 Toulouse cedex 9 France
| | - Raphael Nougué
- Université de Toulouse; UPS, and CNRS, LHFA UMR 5069; 118 route de Narbonne 31062 Toulouse cedex 9 France
| | | | - Antoine Baceiredo
- Université de Toulouse; UPS, and CNRS, LHFA UMR 5069; 118 route de Narbonne 31062 Toulouse cedex 9 France
| | - Abel De Cózar
- Universidad del País Vasco; Euskal Herriko Unibertsitatea Facultad de Química and Centro de Innovación en Química Avanzada (ORFEO-CINQA); 1072 San Sebastián-Donostia Spain
- Donostia International Physics Center (DIPC); 20018 San Sebastián-Donostia Spain
- IKERBASQUE, Basque Foundation for Science; 48013 Bilbao Spain
| | - Fernando P. Cossío
- Universidad del País Vasco; Euskal Herriko Unibertsitatea Facultad de Química and Centro de Innovación en Química Avanzada (ORFEO-CINQA); 1072 San Sebastián-Donostia Spain
- Donostia International Physics Center (DIPC); 20018 San Sebastián-Donostia Spain
| | - Daisuke Hashizume
- Materials Characterization Support Unit; RIKEN Center for Emergent Matter Science (CEMS); Wako, Saitama 351-0198 Japan
| | - Tsuyoshi Kato
- Université de Toulouse; UPS, and CNRS, LHFA UMR 5069; 118 route de Narbonne 31062 Toulouse cedex 9 France
| |
Collapse
|
3
|
Orbital phase design of diradicals. Top Curr Chem (Cham) 2016. [PMID: 21279576 DOI: 10.1007/128_2008_29] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
Abstract
Over the last three decades the rational design of diradicals has been a challenging issue because of their special features and activities in organic reactions and biological processes. The orbital phase theory has been developed for understanding the properties of diradicals and designing new candidates for synthesis. The orbital phase is an important factor in promoting the cyclic orbital interaction. When all of the conditions: (1) the electron-donating orbitals are out of phase; (2) the accepting orbitals are in phase; and (3) the donating and accepting orbitals are in phase, are simultaneously satisfied, the system is stabilized by the effective delocalization and polarization. Otherwise, the system is less stable. According to the orbital phase continuity requirement, we can predict the spin preference of π-conjugated diradicals and relative stabilities of constitutional isomers. Effects of the intramolecular interaction of bonds and unpaired electrons on the spin preference, thermodynamic and kinetic stabilities of the singlet and triplet states of localized 1,3-diradicals were also investigated by orbital phase theory. Taking advantage of the ring strains, several monocyclic and bicyclic systems were designed with appreciable singlet preference and kinetic stabilities. Substitution effects on the ground state spin and relative stabilities of diradicals were rationalized by orbital interactions without loss of generality. Orbital phase predictions were supported by available experimental observations and sophisticated calculation results. In comparison with other topological models, the orbital phase theory has some advantages. Orbital phase theory can provide a general model for both π-conjugated and localized diradicals. The relative stabilities and spin preference of all kinds of diradicals can be uniformly rationalized by the orbital phase property. The orbital phase theory is applied to the conformations of diradicals and the geometry-dependent behaviors. The insights gained from the orbital phase theory are useful in a rational design of stable 1,3-diradicals.
Collapse
|
4
|
Jana A, Huch V, Rzepa HS, Scheschkewitz D. A Molecular Complex with a Formally Neutral Iron Germanide Motif (Fe2Ge2). Organometallics 2014. [DOI: 10.1021/om501286g] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Anukul Jana
- Krupp-Chair
of General and Inorganic Chemistry, Saarland University, 66125 Saarbrücken, Germany
| | - Volker Huch
- Krupp-Chair
of General and Inorganic Chemistry, Saarland University, 66125 Saarbrücken, Germany
| | - Henry S. Rzepa
- Department
of Chemistry, Imperial College London, London SW7 2AZ, United Kingdom
| | - David Scheschkewitz
- Krupp-Chair
of General and Inorganic Chemistry, Saarland University, 66125 Saarbrücken, Germany
| |
Collapse
|
5
|
Maity B, Koley D. Mechanistic investigation of the reactivity of disilene with nitrous oxide: A DFT study. J Mol Graph Model 2014; 51:50-63. [PMID: 24858255 DOI: 10.1016/j.jmgm.2014.04.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2014] [Revised: 04/24/2014] [Accepted: 04/26/2014] [Indexed: 11/30/2022]
Abstract
We have reported the mechanistic investigation of the reaction of N2O addition to disilene, trans-[(TMS)2N(η(1)-Me5C5)SiSi(η(1)-Me5C5)N(TMS)2] (1t), employing density functional theory (BP86/TZVP//BP86/SVP) calculations. The potential energy surfaces of the title reaction are broadly classified under three pathways. Pathway I deals with the direct N2O additions to 1t affording the trans-dioxadisiletane ring compound Pt whereas in the same pathway we report a different bifurcation route from intermediate 2t. This route portrays the isomerization of trans-monooxadisiletane species 2t prior to the second N2O addition, finally leading to the cis-isomeric product Pc. Different possibilities for isomerization of disilene 1t to 1c were studied in pathway II. The cis-disilene (1c) formed can subsequently react with two N2O molecules affording the cis-product Pc. Pathway III details the formation of silanone type intermediate 6, which subsequently combine with another silanone to afford loosely bound intermediates 7 and 8 respectively. The two separated silanone fragments in the isomeric intermediates 7 and 8 can then dimerizes to furnish the desired products. Among all the calculated potential energy surfaces, pathway III remains the most preferred route for disilene oxygenation under normal experimental condition. The present investigation about disilene reactivity will provide a deeper understanding on silylene chemistry and will exhibit promising applicability in main group chemistry as a whole.
Collapse
Affiliation(s)
- Bholanath Maity
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741252, India
| | - Debasis Koley
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741252, India.
| |
Collapse
|
6
|
Inagaki S, Murai H, Takeuchi T. Theory of electron localization and its application to blue-shifting hydrogen bonds. Phys Chem Chem Phys 2012; 14:2008-14. [DOI: 10.1039/c2cp23047j] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
7
|
|
8
|
Affiliation(s)
- Jing Ma
- a Department of Chemistry , Nanjing University , Nanjing , P. R. China
| | - Atsushi Hozaki
- b Department of Chemistry, Faculty of Engineering , Gifu University , Yanagido, Gifu , Japan
| | - Satoshi Inagaki
- b Department of Chemistry, Faculty of Engineering , Gifu University , Yanagido, Gifu , Japan
| |
Collapse
|
9
|
Thermal [3,3]-rearrangement of 1,1-disubstituted allyl carboxylates: lone pair participation and the geminal bond participation. Tetrahedron 2010. [DOI: 10.1016/j.tet.2010.06.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|
10
|
Inagaki S. Orbitals in inorganic chemistry: metal rings and clusters, hydronitrogens, and heterocyles. Top Curr Chem (Cham) 2010; 289:293-315. [PMID: 21279578 DOI: 10.1007/128_2008_41] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
A chemical orbital theory is useful in inorganic chemistry. Some applications are described for understanding and designing of inorganic molecules. Among the topics included are: (1) valence electron rules to predict stabilities of three- and four-membered ring metals and for those of regular octahedral M(6) metal clusters solely by counting the number of valence electrons; (2) pentagon stability (stability of five- relative to six-membered rings in some classes of molecules), predicted and applied for understanding and designing saturated molecules of group XV elements; (3) properties of unsaturated hydronitrogens N( m )H( n ) in contrast to those of hydrocarbons C( m )H( n ); (4) unusually short nonbonded distances between metal atoms in cyclic molecules.
Collapse
Affiliation(s)
- Satoshi Inagaki
- Department of Chemistry, Faculty of Engineering, Gifu University, Yanagido, Gifu, 501-1193, Japan,
| |
Collapse
|
11
|
DFT Study for the Thermodynamic Stability and Energetics of Four-membered Cyclic H 2(X n+1O 2n)H 2(X=C, or Si, n=1-5) Oligomers. JOURNAL OF THE KOREAN CHEMICAL SOCIETY-DAEHAN HWAHAK HOE JEE 2008. [DOI: 10.5012/jkcs.2008.52.6.614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
12
|
Yamamoto T, Kaneno D, Tomoda S. The Origin of Cis Effect in 1,2-Dihaloethenes: The Quantitative Comparison of Electron Delocalizations and Steric Exchange Repulsions. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2008. [DOI: 10.1246/bcsj.81.1415] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
13
|
Wang Y, Ma J, Inagaki S. Stable silicon-centered localized singlet 1,3-diradicals XSi(GeY2)2SiX: theoretical predictions. J PHYS ORG CHEM 2007. [DOI: 10.1002/poc.1221] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
14
|
|
15
|
Naruse Y, Fukasawa S, Ota S, Deki A, Inagaki S. Geminal bond participation in the uncatalyzed Mukaiyama aldol reaction. Tetrahedron Lett 2007. [DOI: 10.1016/j.tetlet.2006.11.149] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
16
|
Shimada S, Tanaka M. Group 10 transition-metal complexes with metal–silicon bonds derived from 1,2-disilylbenzenes and bis(2-silylphenyl)silane. Coord Chem Rev 2006. [DOI: 10.1016/j.ccr.2005.12.010] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
17
|
|
18
|
|
19
|
Takeuchi K, Uemura D, Inagaki S. Structure, Strain, and Degenerate Rearrangement of Tricyclo[2.1.0.0]pentasilane and Related Molecules. J Phys Chem A 2005; 109:8632-6. [PMID: 16834263 DOI: 10.1021/jp052777q] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We theoretically investigate a highly strained tricyclic silane (tricyclo[2.1.0.0 1,3]pentasilane (4b), an isomer of pentasila[1.1.1]propellane (3b)) composed of three fused three-membered rings. The central ring is distorted. One of the fusion bonds in the central ring is shorter than the normal Si-Si single bond (2.350 A) whereas the other is as long as the fusion bonds in bicyclo[1.1.0]tetrasilane (2b) (2.860 A) and 3b (2.778 A). The tricyclic silane is less strained than the carbon congener and more strained than the isomer 3b. The electron delocalization between one of the fusion bonds and the geminal Si-Si ring bonds elongates the fusion bond and stabilizes the molecules to reduce the strain. The silanes composed of the fused three-membered rings are less strained than the carbon congener. A degenerate rearrangement of a three-membered ring is predicted. The enthalpy of activation of the rearrangement of the distorted central ring is low (7.2 kcal/mol) for 4b, but appreciable (22.3 kcal/mol) for the germanium congener, tricyclo[2.1.0.0(1,3)]pentagermane (4c). We investigate the effects of the substituents on the distortion of the central three-membered ring and the degenerate rearrangement.
Collapse
Affiliation(s)
- Kunihiro Takeuchi
- Department of Chemistry, Faculty of Engineering, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan
| | | | | |
Collapse
|
20
|
Wang Y, Ma J, Inagaki S. Theoretical design of singlet localized σ-diradicals: C(MH2)3C (M=Si, Ge, Sn, Pb). Tetrahedron Lett 2005. [DOI: 10.1016/j.tetlet.2005.06.064] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|
21
|
Takeuchi K, Horiguchi A, Inagaki S. Highly strained tricyclic molecules: tricyclo[p.q.0.01,f]alkanes and phosphatricyclo[m.1.0.01,3]alkanes. Tetrahedron 2005. [DOI: 10.1016/j.tet.2005.01.066] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
22
|
Ab Initio Quantum Mechanical Investigation of H2(An+1X2n)H2(A=C or Si, X=O or S, n = 1-2)]; Energetics, Molecular Structures, and Vibrational Frequencies. B KOREAN CHEM SOC 2005. [DOI: 10.5012/bkcs.2005.26.1.119] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
23
|
|
24
|
Naruse Y, Ma J, Inagaki S. σ and π Relaxation of Strain in Three-Membered Ring Molecules (CH2)2X, (NH)2X, and (SiH2)2X (X = SiH2, PH, S). J Phys Chem A 2003. [DOI: 10.1021/jp0210677] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yuji Naruse
- Department of Chemistry, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan, and Department of Chemistry, Nanjing University, Nanjing 210093, People's Republic of China
| | - Jing Ma
- Department of Chemistry, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan, and Department of Chemistry, Nanjing University, Nanjing 210093, People's Republic of China
| | - Satoshi Inagaki
- Department of Chemistry, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan, and Department of Chemistry, Nanjing University, Nanjing 210093, People's Republic of China
| |
Collapse
|
25
|
Naruse Y, Inagaki S, Kano N, Nakagawa N, Kawashima T. Hypercoordination to a saturated carbon atom. Tetrahedron Lett 2002. [DOI: 10.1016/s0040-4039(02)01204-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
26
|
Ma J, Hozaki A, Inagaki S. Pentagon stability: cyclic delocalization of lone pairs through sigma conjugation and design of polycyclophosphanes. Inorg Chem 2002; 41:1876-82. [PMID: 11925183 DOI: 10.1021/ic0107835] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The orbital-phase theory was applied to propose pentagon stability in a well-defined manner. Cyclic delocalization of the lone pair electrons on the five-membered ring atoms through the vicinal sigma bonds was shown to be favored by the orbital-phase properties. The pentagon stability was found to be outstanding in saturated phosphorus five-membered rings in the puckered conformation, and was substantiated by the negative strain energy of cyclopentaphosphane, P(5)H(5) (3). The relative increments of the remarkable increase in the strain energies of protonation on the different atoms in the most stable conformers supported the significance of the cyclic delocalization of the lone pairs. Pentagon stability led to the design of three novel polycyclic phosphanes, P(12)H(4) (18), P(13)H(3) (19), and P(14)H(2) (20), with low strain energies due to many puckered pentagon units in them. The low stability of the dodecahedron P(20) (22) was suggested by the high strain energy due to its planar pentagon units. The pentagon stability is less significant in the saturated nitrogen ring molecules due to the greater energy gap between the n and sigma orbitals.
Collapse
Affiliation(s)
- Jing Ma
- Department of Chemistry, Faculty of Engineering, Gifu University, Yanagido, Gifu 501-1193, Japan
| | | | | |
Collapse
|
27
|
|
28
|
Ma J, Inagaki S. Orbital phase control of the preferential branching of chain molecules. J Am Chem Soc 2001; 123:1193-8. [PMID: 11456673 DOI: 10.1021/ja003067v] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The orbital phase theory was applied to the stabilities of the branched isomers (1) of E(4)H(10) (E = C, Si, Ge, Sn) relative to the normal ones (2). The orbital phase prediction was confirmed by ab initio molecular orbital (MO) and density functional theory (DFT) calculations as well as by some experimental results. Further applications to the relative stabilities of other alkane and alkene isomers lead to the preference of the branched to the normal isomers, the neopentane-type to isobutane-type branching, the terminal to inner methyl branching, and the methyl to ethyl inner substitution in the longer alkanes, as well as the preference of isobutene to 2-butene moieties. The preferential stabilization of the branched isomers was shown to be general and controlled by the orbital phase.
Collapse
Affiliation(s)
- J Ma
- Department of Chemistry, Faculty of Engineering, Gifu University, Yanagido, Gifu 501-1193, Japan
| | | |
Collapse
|
29
|
Naruse Y, Hayashi A, Sou SI, Ikeda H, Inagaki S. Structures and Reactions of Alkoxymethyl(alkali metals). Ethylation by Methyl Ethers in the Presence of Organometallic Bases. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2001. [DOI: 10.1246/bcsj.74.245] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|