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Jasiok B, Chorążewski M, Pribylov AA, Postnikov EB, Friant-Michel P, Millot C. Thermophysical properties of chloropropanes in liquid phase: Experiments and simulations. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Takahashi O, Kohno Y, Nishio M. Relevance of weak hydrogen bonds in the conformation of organic compounds and bioconjugates: evidence from recent experimental data and high-level ab initio MO calculations. Chem Rev 2011; 110:6049-76. [PMID: 20550180 DOI: 10.1021/cr100072x] [Citation(s) in RCA: 447] [Impact Index Per Article: 34.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Osamu Takahashi
- Department of Chemistry, Graduate School of Science, Hiroshima University, Kagamiyama, Higashi-Hiroshima, 739-8526, Japan.
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Wang H, Huang Y. A conformational study of 1-bromo-2-chloroethane in zeolites. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2009; 25:8042-8050. [PMID: 19374340 DOI: 10.1021/la9002675] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The conformational properties of 1-bromo-2-chloroethane (BCE) in several representative zeolites including silicalite-1, siliceous Y (Si-Y), Na-Y, and zeolite L have been investigated by FT-Raman spectroscopy in combination with thermogravimetric analysis. The results indicate that the conformational and dynamic behavior of BCE inside a zeoltic host is strongly influenced by several factors such as the framework topology, the Si/Al ratio, and the nature and the locations of charge-balancing cations. For siliceous zeolites (silicalite-1 and Si-Y), the anti population of BCE increases significantly relative to pure liquid upon initial loading at room temperature. Interestingly, when lowering temperature, the anti population of BCE in silicalite-1 continues to increase, but the conformational equilibrium of BCE inside Si-Y shifts to the gauche conformer. Zeolite L and Na-Y with extra-framework cations show an almost exclusive preference for the gauche mode of the BCE molecule at room temperature, and the conformational population does not change significantly at low temperatures.
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Affiliation(s)
- Haiyan Wang
- Department of Chemistry, The University of Western Ontario, London, Ontario, Canada N6A 5B7
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Kasezawa K, Kato M. Effect of Pressure on Conformational Equilibria of 1-Chloropropane and 1-Bromopropane in Water and Organic Solvents: A Raman Spectroscopic Study. J Phys Chem B 2009; 113:8607-12. [DOI: 10.1021/jp900073p] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Affiliation(s)
- Kunihiro Kasezawa
- Graduate School of Science and Engineering, and Department of Pharmacy, College of Pharmaceutical Sciences, Ritsumeikan University, 1-1-1 Nojihigashi, Kusatsu, Shiga 525-8577, Japan
| | - Minoru Kato
- Graduate School of Science and Engineering, and Department of Pharmacy, College of Pharmaceutical Sciences, Ritsumeikan University, 1-1-1 Nojihigashi, Kusatsu, Shiga 525-8577, Japan
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Kloss T, Heil J, Kast SM. Quantum Chemistry in Solution by Combining 3D Integral Equation Theory with a Cluster Embedding Approach. J Phys Chem B 2008; 112:4337-43. [DOI: 10.1021/jp710680m] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Thomas Kloss
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, Petersenstraβe 20, 64287 Darmstadt, Germany
| | - Jochen Heil
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, Petersenstraβe 20, 64287 Darmstadt, Germany
| | - Stefan M. Kast
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, Petersenstraβe 20, 64287 Darmstadt, Germany
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Lee JY, Yoshida N, Hirata F. Conformational Equilibrium of 1,2-Dichloroethane in Water: Comparison of PCM and RISM-SCF Methods. J Phys Chem B 2006; 110:16018-25. [PMID: 16898759 DOI: 10.1021/jp0606762] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The RISM-SCF and polarizable continuum model (PCM) approaches have been applied to study the conformational equilibrium of 1,2-dichloroethane (DCE) in water. Both the electron correlation effect and basis sets play an important role in the relative energies of the gauche and trans conformers in gas and solution phases. Both PCM and RISM-MP2 methods resulted in a consistent trend with the previous experimental and theoretical studies that the population of the gauche conformer increases in going from the gas phase to the aqueous solution. However, the PCM treatment could not describe the solvent effect completely in that the sign of the relative free energy of the gauche and trans forms is opposite to the most recent experimental and theoretical data, while the RISM-MP2 gives the right sign in the free energy difference. We found that the larger excess chemical potential gain (by ca. -4.1 kcal/mol) for the gauche conformer is large enough to result in the gauche preference of DCE in water, though it has to compensate for more solute reorganization energy (approximately 1.6 kcal/mol) and overcome the energy difference (approximately 1.6 kcal/mol) in the gas phase. The radial distribution functions between DCE and the nearest water shows that the electrostatic repulsion between chlorine and oxygen atoms is higher in the trans conformer than in the gauche one, while the attractive interaction between chlorine and hydrogen of water is higher in the gauche conformer.
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Affiliation(s)
- Jin Yong Lee
- Department of Theoretical Molecular Science, Institute for Molecular Science, Okazaki 444-8585, Japan
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Gomez JA, Tucker AK, Shepherd TD, Thompson WH. Conformational Free Energies of 1,2-Dichloroethane in Nanoconfined Methanol. J Phys Chem B 2005; 109:17479-87. [PMID: 16853235 DOI: 10.1021/jp052148g] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Monte Carlo simulations have been used to construct free energy surfaces of 1,2-dichloroethane dissolved in methanol confined in hydrophobic spherical cavities of varying size (10-15 A) and solution density (0.6-0.79 g/cm3). The free energy surfaces are functions of two variables: the (center-of-mass) distance from the cavity wall of 1,2-dichloroethane and the Cl-C-C-Cl dihedral angle. Umbrella sampling and the weighted histogram analysis method were used to obtain accurate results for the free energy in these two degrees of freedom. Our results indicate that the conformational equilibrium and the barrier to internal rotation of the 1,2-dichloroethane depend on the position in the cavity. The results are discussed in the context of the solvent density, orientational distributions, and packing effects.
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Affiliation(s)
- J A Gomez
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA
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Kamalova DI, Petrova SA, Remizov AB. Internal rotation in 1,2-di-(p-XC6H4)ethanes (X=H, Br, NO2): infrared spectra and compensation effect. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2003; 59:3053-3062. [PMID: 14583280 DOI: 10.1016/s1386-1425(03)00109-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Infrared absorption spectra and internal rotation of 1,2-di-(p-XC(6)H(4))ethanes (X=H, Br, NO(2)) in crystalline phase, liquid and solutions at various temperatures have been investigated. Band fitting was applied to conformationally sensitive regions of the spectra, and assignment of the peaks to trans and gauche conformations was performed. Enthalpy and entropy differences of the conformers (deltaH(0) and deltaS(0)) were found to be solvent-dependent, and it is interpreted in terms of previously discovered compensation effect. The values deltaH(0) and deltaS(0) for 1,2-di-(p-NO(2)C(6)H(4))ethane obtained are unusually large.
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Affiliation(s)
- D I Kamalova
- Kazan State University, Kremlevskaya St. 18, Kazan 420008, Russia.
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Imai T, Hirata F. Partial molar volume and compressibility of a molecule with internal degrees of freedom. J Chem Phys 2003. [DOI: 10.1063/1.1600437] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
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Gift AD, Ben-Amotz D. Perturbed hard fluid theoretical analysis of the effects of solvation on the thermodynamics of a hemiketal formation reaction. J Chem Phys 2003. [DOI: 10.1063/1.1559675] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
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McClain BL, Ben-Amotz D. Perturbed hard-body fluid analysis of the global effects of solvation on conformational thermodynamics. J Chem Phys 2002. [DOI: 10.1063/1.1505024] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
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McClain BL, Ben-Amotz D. Global Quantitation of Solvent Effects on the Isomerization Thermodynamics of 1,2-Dichloroethane and trans-1,2-Dichlorocyclohexane. J Phys Chem B 2002. [DOI: 10.1021/jp0140973] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Brian L. McClain
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-1393
| | - Dor Ben-Amotz
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-1393
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Ben-Amotz D, Omelyan IP. The influence of molecular shape on chemical reaction thermodynamics. J Chem Phys 2001. [DOI: 10.1063/1.1410376] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Cappelli C, Corni S, Tomasi J. Solvent Effects on trans/gauche Conformational Equilibria of Substituted Chloroethanes: a Polarizable Continuum Model Study. J Phys Chem A 2001. [DOI: 10.1021/jp013049f] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Chiara Cappelli
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy, and Dipartimento di Chimica e Chimica Industriale, Università di Pisa, via Risorgimento 35, 56126 Pisa, Italy
| | - Stefano Corni
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy, and Dipartimento di Chimica e Chimica Industriale, Università di Pisa, via Risorgimento 35, 56126 Pisa, Italy
| | - Jacopo Tomasi
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy, and Dipartimento di Chimica e Chimica Industriale, Università di Pisa, via Risorgimento 35, 56126 Pisa, Italy
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