Theoretical Study of the 67Zn Electric-Field-Gradient Tensors in Zinc(II) Coordination Complexes

Multi-technique structural analysis of zinc carboxylates (soaps)

A series of medium- and long-chain zinc carboxylates (zinc octanoate, zinc nonanoate, zinc decanoate, zinc undecanoate, zinc dodecanoate, zinc pivalate, zinc stearate, zinc palmitate, zinc oleate, and zinc azelate) was analyzed by ultra-high-field 67Zn NMR spectroscopy up to 35.2 T, as well as 13C NMR and FTIR spectroscopy. We also report the single-crystal X-ray diffraction structures of zinc nonanoate, zinc decanoate, and zinc oleate-the first long-chain carboxylate single-crystals to be reported for zinc. The NMR and X-ray diffraction data suggest that the carboxylates exist in three distinct geometric groups, based on structural and spectroscopic parameters. The ssNMR results presented here present a future for dynamic nuclear polarization (DNP)-NMR-based minimally invasive methods for testing artwork for the presence of zinc carboxylates.

Two-dimensional 67Zn HYSCORE spectroscopy reveals that a Zn-bacteriochlorophyll aP′ dimer is the primary donor (P840) in the type-1 reaction centers of Chloracidobacterium thermophilum

Using pulsed EPR spectroscopy and isotopic labeling we demonstrate that reaction centers of Chloracidobacterium thermophilum have an unusual primary donor that is a dimer of Zn-bacteriochlorophyll a_P′ molecules.

Multinuclear NMR Study of Zinc Dicyanide

The isotropic negative expansion of Zn(CN)2 has been linked to a temperature induced increase in off-axis tilting of the C–N bond direction and an increase in CN-bond length. However, the bond length could be determined only indirectly based on pair-distribution function analysis and was found to be surprisingly large. Here we study Zn(CN)2 by nuclear magnetic resonance spectroscopy and first principles calculations. By using samples enriched in 13 C and 15 N the dipole coupling between carbon and nitrogen is determined, and from this an upper bound on the C–N bond length of 1.19 ± 0.01 Å is derived. This quantity agrees with earlier determinations based on diffraction but is shorter than estimates based on pair distribution function analysis. The relation of this estimate to possible dynamics in the sample is discussed. Finally, 67 Zn NMR is used together with first principles calculations to assess disorder in the material.

Solid-State 25Mg NMR Spectroscopic and Computational Studies of Organic Compounds. Square-Pyramidal Magnesium(II) Ions in Aqua(magnesium) Phthalocyanine and Chlorophyll a

We report a solid-state (25)Mg NMR spectroscopic study of two magnesium-containing organic compounds: monopyridinated aqua(magnesium) phthalocyanine (MgPc.H(2)O.Py) and chlorophyll a (Chla). Each of these compounds contains a Mg(II) ion coordinating to four nitrogen atoms and a water molecule in a square-pyramidal geometry. Solid-state (25)Mg NMR spectra for MgPc.H(2)O.Py were obtained at 11.7 T (500 MHz for (1)H) for a (25)Mg-enriched sample (99.1% (25)Mg atom) using both Hahn-echo and quadrupole Carr-Purcell Meiboom-Gill (QCPMG) pulse sequences. Solid-state (25)Mg NMR spectra for Chla were recorded at (25)Mg natural abundance (10.1%) at 19.6 T (830 MHz for (1)H). The (25)Mg quadrupole parameters were determined from spectral analyses: MgPc.H(2)O.Py, C(Q) = 13.0 +/- 0.1 MHz and eta(Q) = 0.00 +/- 0.05; Chla, C(Q) = 12.9 +/- 0.1 MHz and eta(Q) = 1.00 +/- 0.05. This work represents the first time that Mg(II) ions in a square-pyramidal geometry have been characterized by solid-state (25)Mg NMR spectroscopy. Extensive quantum mechanical calculations for electric-field-gradient (EFG) and chemical shielding tensors were performed at restricted Hartee-Fock (RHF), density functional theory (DFT), and second-order Møller-Plesset perturbation theory (MP2) levels for both compounds. Computed (25)Mg nuclear quadrupole coupling constants at the RHF and MP2 levels show a reasonable basis-set convergence at the cc-pV5Z basis set (within 7% of the experimental value); however, B3LYP results display a drastic divergence beyond the cc-pVTZ basis set. A new crystal structure for MgPc.H(2)O.Py is also reported.

NMR spectroscopic, mass spectroscopic, X-ray crystallographic, and theoretical studies of molecular mechanics of natural products: farformolide B and sesamin

Two natural products, farformolide B and sesamin were isolated from Farfugium japonicum and Cinnamomum kanehirae, respectively. The structures of the two natural products, including their relative stereochemistry, were elucidated using spectroscopic data and theoretical calculations. The molecule 1 (farformolide B) is newly recognized by X-ray crystallography. The two compounds were also investigated by a theoretical analysis using the B3LYP/6-31G* method of the Gaussian 03 package program. The theoretical results were supplemented by experimental data to determine the optimal geometric structures of the two compounds. The calculated molecular mechanics were found to compare well with the experimental data. Several important thermodynamic properties of the two products, including ionization potentials, highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) energies, energy gaps, heat of formation, atomization energies, and vibration frequencies, were also calculated. The study also provided a good understanding of the stereochemical structure and thermodynamic properties of the two molecules.