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MENG YAN, TIAN CHUANJIN, WANG FENGTING, WANG ZHIGANG, JIN MINGXING, CHEN LEI, FENG WEI, DING DAJUN. HYPERCONJUGATION EFFECT ON THE STRUCTURAL STABILITY OF A TERT-BUTYL AND ITS DERIVED C4Hn(n = 4–10) ISOMERS. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2012. [DOI: 10.1142/s0219633612500812] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The hyperconjugation effect on molecular structural stability is studied by performing first-principles calculations on the tert-butyl and its derived C 4 H n(n = 4–10) isomer structures. Four of the isomer structures with n = 7–10 were found to show hyperconjugation similar to that in the tert-butyl, with hyperconjugation orbital energies decreasing with the increase of the number of hydrogen atoms participating in the hyperconjugation (PIH). The distribution of charge carried by the PIH hydrogen atoms is uniform, which reveals a delocalization character in the electronic structures; and the PIH hydrogen atoms are found responsible for the main IR spectrum peak relating to C-H stretching vibration.
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Affiliation(s)
- YAN MENG
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
| | - CHUANJIN TIAN
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
- School of Material Science and Engineering, Jingdezhen Ceramic Institute, Jingdezhen 333001, P. R. China
| | - FENGTING WANG
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
| | - ZHIGANG WANG
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
| | - MINGXING JIN
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
| | - LEI CHEN
- Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, Jilin University, Changchun, 130012, P. R. China
| | - WEI FENG
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
| | - DAJUN DING
- Institute of Atomic and Molecular Physics, Jilin University, Changchun, 130012, P. R. China
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Marek R, Křístková A, Maliňáková K, Toušek J, Marek J, Hocek M, Malkina OL, Malkin VG. Interpretation of Indirect Nuclear Spin−Spin Couplings in Isomers of Adenine: Novel Approach to Analyze Coupling Electron Deformation Density Using Localized Molecular Orbitals. J Phys Chem A 2010; 114:6689-700. [DOI: 10.1021/jp102186r] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Radek Marek
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Anežka Křístková
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Kateřina Maliňáková
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Jaromír Toušek
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Jaromír Marek
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Michal Hocek
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Olga L. Malkina
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
| | - Vladimir G. Malkin
- National Center for Biomolecular Research, Masaryk University, Kamenice 5/A4, CZ-62500 Brno, Czech Republic, Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84536 Bratislava, Slovak Republic, Laboratory of Functional Genomics and Proteomics, Masaryk University, Kamenice 5/A2, CZ-62500 Brno, Czech Republic, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague, Czech Republic
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Contreras RH, Esteban AL, Díez E, Lochert IJ, Della EW, Tormena CF. Experimental and DFT studies on the transmission mechanisms of analogous NMR JCH and JCC couplings in 1-X- and 1-X-3-methylbicyclo[1.1.1]-pentanes. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2007; 45:572-7. [PMID: 17534878 DOI: 10.1002/mrc.2009] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
The main aim of this work is to compare the transmission mechanisms for the Fermi contact term of spin-spin couplings, SSCCs, in series 1-X-bicyclo[1.1.1]-pentane, (1), and 1-X-3-methylbicyclo[1.1.1]pentane, (2), and from that comparison to gain insight into some subtle aspects of the FC transmission. To this end, 18 members of the latter series were isotopically enriched in (13)C at the methyl position and the following couplings were measured; 1JC3CMe, 3JC1CMe and 4JCXCMe. These three types of SSCCs in (2) are compared, respectively, with 1JC3H3, 3JC1H3 and 4JCXH in (1); these latter values were taken from previous works. Since electron delocalization plays an important role in the transmission of the FC interaction, the natural bond orbital (NBO) method is employed to quantify electron delocalization interactions within selected members of series (1) and (2). It is found that 1JC3H3 SSCCs in (1) is more efficiently transmitted than 1JC3CMe SSCCs in (2). On the other hand, 3JC1H3 and 4JCXH SSCCs in (1) are notably less efficiently transmitted than 3JC1CMe and 4JCXCMe SSCCs in (2), although substituent effects on these two SSCCs show the opposite trends. These different efficiencies are rationalized in terms of different sigma-hyperconjugative interactions in both series of compounds.
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Affiliation(s)
- Rubén H Contreras
- Department of Physics, FCEyN, University of Buenos Aires, Ciudad Universitaria, Pabellón 1 (C1428EHA) Buenos Aires, Argentina
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