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Dey BK, Shaw S. Reaction force surface for the hydrogen transfer reaction in malonaldehyde: A classical wavefront-based formulation. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2018. [DOI: 10.1142/s0219633618500517] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
This paper investigates the simulation of a modified Hamilton–Jacobi equation in order to provide a classical wavefront-based formulation of reaction dynamics. Here, the wavefront is interpreted as minimizing a particular action functional. The method is rooted in the geometric optics and an eikonal equation is typically used for describing the light wave propagation. We have introduced a general formulation for reaction force surface (RFS) and a host of several force-based properties, which offer a reinvigorated understanding of the occurrence of a reaction event at molecular level. The calculation is performed on a model potential energy surface representing the hydrogen transfer reaction in malonaldehyde.
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Affiliation(s)
- Bijoy K. Dey
- Department of Chemistry, Claflin University, Orangeburg, SC 29115, USA
| | - Shaquille Shaw
- Department of Chemistry, Claflin University, Orangeburg, SC 29115, USA
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Hättig C, Klopper W, Köhn A, Tew DP. Explicitly Correlated Electrons in Molecules. Chem Rev 2011; 112:4-74. [DOI: 10.1021/cr200168z] [Citation(s) in RCA: 401] [Impact Index Per Article: 30.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Christof Hättig
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, Germany
| | - Wim Klopper
- Abteilung für Theoretische Chemie, Institut für Physikalische Chemie, Karlsruher Institut für Technologie, KIT-Campus Süd, Postfach 6980, D-76049 Karlsruhe, Germany
| | - Andreas Köhn
- Institut für Physikalische Chemie, Johannes Gutenberg-Universität Mainz, D-55099 Mainz, Germany
| | - David P. Tew
- School of Chemistry, University of Bristol, Bristol BS8 1TS, United Kingdom
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Szalay PG, Müller T, Gidofalvi G, Lischka H, Shepard R. Multiconfiguration Self-Consistent Field and Multireference Configuration Interaction Methods and Applications. Chem Rev 2011; 112:108-81. [DOI: 10.1021/cr200137a] [Citation(s) in RCA: 470] [Impact Index Per Article: 36.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Péter G. Szalay
- Laboratory for Theoretical Chemistry, Institute of Chemistry, Eötvös Loránd University, P. O. Box 32, H-1518 Budapest, Hungary
| | - Thomas Müller
- Jülich Supercomputer Centre, Institute of Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany
| | - Gergely Gidofalvi
- Department of Chemistry and Biochemistry, Gonzaga University, 502 East Boone Avenue, Spokane, Washington 99258-0102, United States
| | - Hans Lischka
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas 79409-1061, United States
- Institute for Theoretical Chemistry, University of Vienna, Waehringerstrasse 17, A-1090 Vienna, Austria
| | - Ron Shepard
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
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Kong L, Bischoff FA, Valeev EF. Explicitly Correlated R12/F12 Methods for Electronic Structure. Chem Rev 2011; 112:75-107. [DOI: 10.1021/cr200204r] [Citation(s) in RCA: 353] [Impact Index Per Article: 27.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Liguo Kong
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
| | - Florian A. Bischoff
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
| | - Edward F. Valeev
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
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Ediz V, Monda AC, Brown RP, Yaron DJ. Using Molecular Similarity to Develop Reliable Models of Chemical Reactions in Complex Environments. J Chem Theory Comput 2009; 5:3175-84. [DOI: 10.1021/ct9004195] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Volkan Ediz
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213
| | - Anthony C. Monda
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213
| | - Robert P. Brown
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213
| | - David J. Yaron
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213
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Knizia G, Werner HJ. Explicitly correlated RMP2 for high-spin open-shell reference states. J Chem Phys 2008; 128:154103. [DOI: 10.1063/1.2889388] [Citation(s) in RCA: 221] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
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Lique F, Alexander MH, Li G, Werner HJ, Nizkorodov SA, Harper WW, Nesbitt DJ. Evidence for excited spin-orbit state reaction dynamics in F+H2: Theory and experiment. J Chem Phys 2008; 128:084313. [DOI: 10.1063/1.2831412] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Werner HJ, Kállay M, Gauss J. The barrier height of the F+H2 reaction revisited: Coupled-cluster and multireference configuration-interaction benchmark calculations. J Chem Phys 2008; 128:034305. [DOI: 10.1063/1.2822905] [Citation(s) in RCA: 124] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
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Li G, Werner HJ, Lique F, Alexander MH. New ab initio potential energy surfaces for the F+H2 reaction. J Chem Phys 2007; 127:174302. [DOI: 10.1063/1.2778421] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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De Fazio D, Aquilanti V, Cavalli S, Aguilar A, Lucas JM. Exact quantum calculations of the kinetic isotope effect: cross sections and rate constants for the F+HD reaction and role of tunneling. J Chem Phys 2007; 125:133109. [PMID: 17029435 DOI: 10.1063/1.2221695] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
In this paper we present integral cross sections (in the 5-220 meV collision energy range) and rate constants (in the 100-300 K range of temperature) for the F+HD reaction leading to HF+D and DF+H. The exact quantum reactive scattering calculations were carried out using the hyperquantization algorithm on an improved potential energy surface which incorporates the effects of open shell and fine structure of the fluorine atom in the entrance channel. The results reproduce satisfactorily molecular beam scattering experiments as well as chemical kinetics data for both the HF and DF channels. In particular, the agreement of the rate coefficients and the vibrational branching ratios with experimental measurements is improved with respect to previous studies. At thermal and subthermal energies, the rates are greatly influenced by tunneling through the reaction barrier. Therefore exchange of deuterium is shown to be penalized with respect to exchange of hydrogen, and the isotopic branching exhibits a strong dependence on translational energy. Also, it is found that rotational excitation of the reactant HD molecule enhances the production of HF and decreases the reactivity at the D end, obtaining insight on the reaction stereodynamics.
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Affiliation(s)
- Dario De Fazio
- Dipartimento di Chimica, Università di Perugia, 06123 Perugia, Italy.
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Fernandez-Ramos A, Miller JA, Klippenstein SJ, Truhlar DG. Modeling the kinetics of bimolecular reactions. Chem Rev 2007; 106:4518-84. [PMID: 17091928 DOI: 10.1021/cr050205w] [Citation(s) in RCA: 393] [Impact Index Per Article: 23.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Antonio Fernandez-Ramos
- Departamento de Quimica Fisica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
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Abstract
A critical overview of the recent progress in crossed-beam reactive scattering is presented. This review is not intended to be an exhaustive nor a comprehensive one, but rather a critical assessment of what we have been learning about bimolecular reaction dynamics using crossed molecular beams since year 2000. Particular emphasis is placed on the information content encoded in the product angular distribution-the trait of a typical molecular beam scattering experiment-and how the information can help in answering fundamental questions about chemical reactivity. We will start with simple reactions by highlighting a few benchmark three-atom reactions, and then move on progressively to the more complex chemical systems and with more sophisticated types of measurements. Understanding what cause the experimental observations is more than computationally simulating the results. The give and take between experiment and theory in unraveling the physical picture of the underlying dynamics is illustrated throughout this review.
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Affiliation(s)
- Kopin Liu
- Institute of Atomic and Molecular Sciences (IAMS), Academia Sinica, Taipei 10617, Taiwan.
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Klopper W, Manby FR, Ten-No S, Valeev EF. R12 methods in explicitly correlated molecular electronic structure theory. INT REV PHYS CHEM 2006. [DOI: 10.1080/01442350600799921] [Citation(s) in RCA: 303] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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