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Asakura T, Aoki A, Komatsu K, Ito C, Suzuki I, Naito A, Kaji H. Lamellar Structure in Alanine-Glycine Copolypeptides Studied by Solid-State NMR Spectroscopy: A Model for the Crystalline Domain of Bombyx mori Silk Fibroin in Silk II Form. Biomacromolecules 2020; 21:3102-3111. [PMID: 32603138 DOI: 10.1021/acs.biomac.0c00486] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Bombyx mori silk fibroin (SF) fibers with excellent mechanical properties have attracted widespread attention as new biomaterials. However, the structural details are still not conclusive. Here, we propose a lamellar structure for the crystalline domain of the SF fiber based on structural analyses of the Ala Cβ peaks in the 13C cross-polarization/magic angle spinning NMR spectra of (Ala-Gly)m (m = 9, 12, 15, and 25) and 13C selectively labeled (Ala-Gly)15 model peptides. Namely, three Ala Cβ peaks with relative intensities of 1:2:1 obtained by deconvolution were assigned to two kinds of β-sheet and a β-turn, which are interpreted as a lamellar structure formed by repetitive folding using β-turns every eighth amino acid, for which the basic structure is (Ala-Gly)4 in an antipolar arrangement. The dynamics and intermolecular arrangement were further studied using 13C solid-state spin-lattice relaxation time observations and the rotational echo double resonance experiments, respectively.
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Affiliation(s)
- Tetsuo Asakura
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Akihiro Aoki
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Kohei Komatsu
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Chie Ito
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Ikue Suzuki
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Akira Naito
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Hironori Kaji
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
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Asakura T, Nishimura A, Kametani S, Kawanishi S, Aoki A, Suzuki F, Kaji H, Naito A. Refined Crystal Structure of Samia cynthia ricini Silk Fibroin Revealed by Solid-State NMR Investigations. Biomacromolecules 2017; 18:1965-1974. [DOI: 10.1021/acs.biomac.7b00441] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Tetsuo Asakura
- Department
of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Akio Nishimura
- Department
of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Shunsuke Kametani
- Department
of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Shuto Kawanishi
- Department
of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Akihiro Aoki
- Department
of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
| | - Furitsu Suzuki
- Institute
for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Hironori Kaji
- Institute
for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Akira Naito
- Department
of Biotechnology, Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-8588, Japan
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Jessat T, Adjei-Acheamfour M, Storek M, Böhmer R. Submillimeter coils for stimulated-echo spectroscopy of a solid sodium ion conductor by nonselective excitation of MHz broad 23Na quadrupolar satellite spectra. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2017; 82-83:16-21. [PMID: 28119198 DOI: 10.1016/j.ssnmr.2016.12.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Revised: 12/08/2016] [Accepted: 12/20/2016] [Indexed: 05/20/2023]
Abstract
In solids the detection of ionic motion covering the time range of milliseconds and longer is often accomplished using stimulated-echo spectroscopy. For spectral line widths much below or much above 1MHz nonselective or fully selective radio-frequency pulse excitation, respectively, is typically applied in such experiments. To enable the study of samples with quadrupolarly broadened satellite spectra featuring intermediate widths (in the lower MHz range) the present work exploits microcoils. Using such coils, stimulated-echo spectroscopy can be performed under conditions of nonselective excitation for instance with 23Na as a nuclear probe. Nutation experiments carried out used to assess the coil performance. The impact of second-order quadrupolar interactions is studied using explicit density-matrix calculations. The applicability of the present approach is successfully tested for a sodium orthophosphate based solid ion conductor.
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Affiliation(s)
- T Jessat
- Fakultät Physik, Technische Universität Dortmund, 44221 Dortmund, Germany
| | - M Adjei-Acheamfour
- Fakultät Physik, Technische Universität Dortmund, 44221 Dortmund, Germany
| | - M Storek
- Fakultät Physik, Technische Universität Dortmund, 44221 Dortmund, Germany
| | - R Böhmer
- Fakultät Physik, Technische Universität Dortmund, 44221 Dortmund, Germany.
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Yamauchi K, Yamasaki S, Takahashi R, Asakura T. Microscopic structural analysis of fractured silk fibers from Bombyx mori and Samia cynthia ricini using 13C CP/MAS NMR with a 1mm microcoil MAS NMR probehead. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2010; 38:27-30. [PMID: 20579856 DOI: 10.1016/j.ssnmr.2010.06.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2009] [Revised: 06/07/2010] [Accepted: 06/08/2010] [Indexed: 05/29/2023]
Abstract
Conformational changes have been studied in silk fibers from the domestic silkworm Bombyx mori and a wild silkworm Samia cynthia ricini as a result of fractured by stretching. About 300 samples consisting of only the fractured regions of [1-13C]Ala or [1-13C]Gly labeled silk fibers were collected and observed by 13C CP/MAS NMR spectra. The total amount of these fractured fibers is only about 1mg and therefore we used a home-built 1mm microcoil MAS NMR probehead. A very small increase in the fraction of random coil was noted for the alanine regions of both silk fibroins and for the glycine region of B. mori silk fibroin. However, there is no difference in the spectra before and after fractured for the glycine region of S. c. ricini silk fibroin. Thus, the influence of fracture occurs exclusively at the Ala region for S. c. ricini. The relationship between sequence, fracture and structure is discussed.
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Affiliation(s)
- Kazuo Yamauchi
- Department of Biotechnology, Tokyo University of Agriculture and Technology, Naka-cho 2-24-16, Koganei-shi, Tokyo 184-8588, Japan.
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Hagaman EW, Jiao J, Moore T. The generation of intense radiofrequency fields in microcoils. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2008; 193:150-152. [PMID: 18455455 DOI: 10.1016/j.jmr.2008.04.022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2008] [Revised: 04/04/2008] [Accepted: 04/14/2008] [Indexed: 05/26/2023]
Abstract
Large amplitude radiofrequency (rf) fields hold great promise in wide line NMR where it becomes possible to excite the full breadth of the line in a quantitative fashion. Applications in quadrupole NMR and in NMR of paramagnetic systems benefit greatly from intense fields. Spin manipulations in multiple quantum NMR experiments, specifically, the generation of multiple quantum coherence in MQ NMR, are more efficiently produced using intense rf fields. In this work we describe a microcoil probe that produces an rf field of 25 MHz, more than five times larger than the greatest rf field reported in the literature. We accomplish this in a robust, 127 microm diameter solenoid coil using 1 kW of rf power.
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Affiliation(s)
- Edward W Hagaman
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, 1 Bethel Valley Road, Oak Ridge, TN 37831-6201, USA.
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Kentgens APM, Bart J, van Bentum PJM, Brinkmann A, van Eck ERH, Gardeniers JGE, Janssen JWG, Knijn P, Vasa S, Verkuijlen MHW. High-resolution liquid- and solid-state nuclear magnetic resonance of nanoliter sample volumes using microcoil detectors. J Chem Phys 2008; 128:052202. [DOI: 10.1063/1.2833560] [Citation(s) in RCA: 117] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
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Li XG, Wu LY, Huang MR, Shao HL, Hu XC. Conformational transition and liquid crystalline state of regenerated silk fibroin in water. Biopolymers 2008; 89:497-505. [DOI: 10.1002/bip.20905] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Yamauchi K, Asakura T. Development of MicroMAS NMR Probehead for Mass-limited Solid-state Samples. CHEM LETT 2006. [DOI: 10.1246/cl.2006.426] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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