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Nho HW, Park JH, Adhikari A, Kwon OH. Acid–base reaction of a cationic hydration probe in vicinity of anionic interface of AOT reverse micelles. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2020.115270] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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2
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Harvey JA, Thompson WH. Solute location in a nanoconfined liquid depends on charge distribution. J Chem Phys 2015; 143:044701. [DOI: 10.1063/1.4926936] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Jacob A. Harvey
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA
| | - Ward H. Thompson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA
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3
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Martinez F, Hanna G. Assessment of approximate solutions of the quantum–classical Liouville equation for dynamics simulations of quantum subsystems embedded in classical environments. MOLECULAR SIMULATION 2014. [DOI: 10.1080/08927022.2014.923573] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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4
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Tomkins J, Hanna G. Signatures of nanoconfinement on the linear and nonlinear vibrational spectroscopy of a model hydrogen-bonded complex dissolved in a polar solvent. J Phys Chem B 2013; 117:13619-30. [PMID: 24079369 DOI: 10.1021/jp407469f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The one-dimensional IR (1D-IR) absorption and IR pump-probe spectra of a hydrogen stretch in a model hydrogen-bonded complex dissolved in a polar solvent confined in spherical hydrophobic cavities of different sizes were simulated using ground-state mixed quantum-classical dynamics. Due to a thorough analysis of key properties of the complex and solvent from equilibrium trajectory data, we were able to gain insight into the microscopic details underlying the spectra. Both the 1D-IR and IR pump-probe spectra manifested the effects of confinement on the relative stabilities of the covalent and ionic forms of the complex through pronounced changes in their peak intensities and numbers. However, in contrast to the 1D-IR spectra, the time-resolved pump-probe spectra were found to be uniquely sensitive to the changes in the molecular dynamics as the cavity size is varied. In particular, it was found that the variations in the time evolutions of the peak intensities in the pump-probe spectra reflect the differences in the solvation dynamics associated with the various forms of the complex in different locations within the cavities. The ability to detect these differences underscores the advantage of using pump-probe spectroscopy for studying nanoconfined systems.
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Affiliation(s)
- Joseph Tomkins
- Department of Chemistry, University of Alberta , Edmonton, Alberta, Canada T6G 2G2
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Sow CS, Tomkins J, Hanna G. Computational study of the one- and two-dimensional infrared spectra of a proton-transfer mode in a hydrogen-bonded complex dissolved in a polar nanocluster. Chemphyschem 2013; 14:3309-18. [PMID: 23946271 DOI: 10.1002/cphc.201300610] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2013] [Indexed: 11/07/2022]
Abstract
The signatures of nanosolvation on the one- and two-dimensional (1D and 2D) IR spectra of a proton-transfer mode in a hydrogen-bonded complex dissolved in polar solvent molecule nanoclusters of varying size are elucidated by using mixed quantum-classical molecular dynamics simulations. For this particular system, increasing the number of solvent molecules successively from N=7 to N=9 initiates the transition of the system from a cluster state to a bulk-like state. Both the 1D and 2D IR spectra reflect this transition through pronounced changes in their peak intensities and numbers, but the time-resolved 2D IR spectra also manifest spectral features that uniquely identify the onset of the cluster-to-bulk transition. In particular, it is observed that in the 1D IR spectra, the relative intensities of the peaks change such that the number of peaks decreases from three to two as the size of the cluster increases from N=7 to N=9. In the 2D IR spectra, off-diagonal peaks are observed in the N=7 and N=8 cases at zero waiting time, but not in the N=9 case. It is known that there are no off-diagonal peaks in the 2D IR spectrum of the bulk version of this system at zero waiting time, so the disappearance of these peaks is a unique signature of the onset of bulk-like behavior. Through an examination of the trajectories of various properties of the complex and solvent, it is possible to relate the emergence of these off-diagonal peaks to an interplay between the vibrations of the complex and the solvent polarization dynamics.
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Affiliation(s)
- Chia Shen Sow
- Department of Chemistry, University of Alberta, Edmonton, AB T6G 2G2 (Canada)
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Vartia AA, Thompson WH. Solvation and Spectra of a Charge Transfer Solute in Ethanol Confined within Nanoscale Silica Pores. J Phys Chem B 2012; 116:5414-24. [DOI: 10.1021/jp210737c] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Anthony A. Vartia
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
| | - Ward H. Thompson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
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7
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Ka BJ, Thompson WH. Sampling the Proton Transfer Reaction Coordinate in Mixed Quantum-Classical Molecular Dynamics Simulations. J Phys Chem A 2012; 116:832-8. [DOI: 10.1021/jp206772e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Being J. Ka
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
| | - Ward H. Thompson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
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Ghatak C, Rao VG, Ghosh S, Mandal S, Sarkar N. Solvation Dynamics and Rotational Relaxation Study Inside Niosome, A Nonionic Innocuous Poly(ethylene Glycol)-Based Surfactant Assembly: An Excitation Wavelength Dependent Experiment. J Phys Chem B 2011; 115:12514-20. [DOI: 10.1021/jp204473d] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Chiranjib Ghatak
- Department of Chemistry, Indian Institute of Technology, Kharagpur 721302, WB, India
| | - Vishal Govind Rao
- Department of Chemistry, Indian Institute of Technology, Kharagpur 721302, WB, India
| | - Shirsendu Ghosh
- Department of Chemistry, Indian Institute of Technology, Kharagpur 721302, WB, India
| | - Sarthak Mandal
- Department of Chemistry, Indian Institute of Technology, Kharagpur 721302, WB, India
| | - Nilmoni Sarkar
- Department of Chemistry, Indian Institute of Technology, Kharagpur 721302, WB, India
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Abstract
Nanoconfined liquids are of interest because of both their fundamental properties and their potential utility in an array of applications. The structure and dynamics of the liquid can be dramatically impacted by the geometrical constraints and the interactions with the interface. Understanding the molecular-level origins of these changes and how they are determined by the characteristics of the confining framework is the subject of ongoing experimental and theoretical studies. The progress and remaining challenges in these efforts are reviewed in the context of solvation dynamics and proton transfer reactions, processes that are strongly affected by nanoscale confinement.
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Affiliation(s)
- Ward H Thompson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA.
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Chowdhary J, Ladanyi BM. Molecular simulation study of water mobility in aerosol-OT reverse micelles. J Phys Chem A 2011; 115:6306-16. [PMID: 21548627 DOI: 10.1021/jp201866t] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
In this work, we present results from molecular dynamics simulations on the single-molecule relaxation of water within reverse micelles (RMs) of different sizes formed by the surfactant aerosol-OT (AOT, sodium bis(2-ethylhexyl)sulfosuccinate) in isooctane. Results are presented for RM water content w(0) = [H(2)O]/[AOT] in the range from 2.0 to 7.5. We show that translational diffusion of water within the RM can, to a good approximation, be decoupled from the translation of the RM through the isooctane solvent. Water translational mobility within the RM is restricted by the water pool dimensions, and thus, the water mean-squared displacements (MSDs) level off in time. Comparison with models of diffusion in confined geometries shows that a version of the Gaussian confinement model with a biexponential decay of correlations provides a good fit to the MSDs, while a model of free diffusion within a sphere agrees less well with simulation results. We find that the local diffusivity is considerably reduced in the interfacial region, especially as w(0) decreases. Molecular orientational relaxation is monitored by examining the behavior of OH and dipole vectors. For both vectors, orientational relaxation slows down close to the interface and as w(0) decreases. For the OH vector, reorientation is strongly affected by the presence of charged species at the RM interface and these effects are especially pronounced for water molecules hydrogen-bonded to surfactant sites that serve as hydrogen-bond acceptors. For the dipole vector, orientational relaxation near the interface slows down more than that for the OH vector due mainly to the influence of ion-dipole interactions with the sodium counterions. We investigate water OH and dipole reorientation mechanisms by studying the w(0) and interfacial shell dependence of orientational time correlations for different Legendre polynomial orders.
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Affiliation(s)
- Janamejaya Chowdhary
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, USA
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11
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Gulmen TS, Thompson W. Model silica pores with controllable surface chemistry for molecular dynamics simulatinos. ACTA ACUST UNITED AC 2011. [DOI: 10.1557/proc-0899-n06-05] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
AbstractModel amorphous silica pores have been developed for use in molecular dynamics simulations. Specifically, roughly cylindrical pores have been constructed with hydrophilic, hydroxyl-terminated surfaces. The approach is designed to allow systematic variation of the pore radius and surface functionality. Thus, these pores are suitable for studying the variability in solvent structure, energy transfer and reaction dynamics occurring inside the pore due to surface modification. The method is described and the properties of the generated pores are discussed.
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12
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Sen Mojumdar S, Mondal T, Das AK, Dey S, Bhattacharyya K. Ultrafast and ultraslow proton transfer of pyranine in an ionic liquid microemulsion. J Chem Phys 2010; 132:194505. [DOI: 10.1063/1.3428669] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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13
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Ka BJ, Thompson WH. Nonadiabatic Effects on Proton Transfer Rate Constants in a Nanoconfined Solvent. J Phys Chem B 2010; 114:7535-42. [DOI: 10.1021/jp911740c] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Being J. Ka
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045
| | - Ward H. Thompson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045
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14
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Applications of Mixed-Quantum/Classical Trajectories to the Study of Nuclear Quantum Effects in Chemical Reactions and Vibrational Relaxation Processes. ADVANCES IN QUANTUM CHEMISTRY 2010. [DOI: 10.1016/s0065-3276(10)59008-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/08/2023]
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15
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Pieniazek PA, Lin YS, Chowdhary J, Ladanyi BM, Skinner JL. Vibrational Spectroscopy and Dynamics of Water Confined inside Reverse Micelles. J Phys Chem B 2009; 113:15017-28. [DOI: 10.1021/jp906784t] [Citation(s) in RCA: 126] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Piotr A. Pieniazek
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, and Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523
| | - Yu-Shan Lin
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, and Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523
| | - Janamejaya Chowdhary
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, and Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523
| | - Branka M. Ladanyi
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, and Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523
| | - J. L. Skinner
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706, and Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523
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Mukhopadhyay M, Mandal A, Misra R, Banerjee D, Bhattacharyya SP, Mukherjee S. Nanopools Governing Proton Transfer in Diametrical Ways in the Ground and Excited State. J Phys Chem B 2008; 113:567-73. [DOI: 10.1021/jp804103h] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Madhuri Mukhopadhyay
- Department of Physical Chemistry, Indian Association for the Cultivation of Science, Jadavpur, India, and Department of Physics, Shibpur Dinabandhu Institution (College), Shibpur, Howrah, India
| | - Abhijit Mandal
- Department of Physical Chemistry, Indian Association for the Cultivation of Science, Jadavpur, India, and Department of Physics, Shibpur Dinabandhu Institution (College), Shibpur, Howrah, India
| | - Ramprasad Misra
- Department of Physical Chemistry, Indian Association for the Cultivation of Science, Jadavpur, India, and Department of Physics, Shibpur Dinabandhu Institution (College), Shibpur, Howrah, India
| | - Debi Banerjee
- Department of Physical Chemistry, Indian Association for the Cultivation of Science, Jadavpur, India, and Department of Physics, Shibpur Dinabandhu Institution (College), Shibpur, Howrah, India
| | - Shankar Prasad Bhattacharyya
- Department of Physical Chemistry, Indian Association for the Cultivation of Science, Jadavpur, India, and Department of Physics, Shibpur Dinabandhu Institution (College), Shibpur, Howrah, India
| | - Samaresh Mukherjee
- Department of Physical Chemistry, Indian Association for the Cultivation of Science, Jadavpur, India, and Department of Physics, Shibpur Dinabandhu Institution (College), Shibpur, Howrah, India
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Dey S, Sasmal DK, Das DK, Bhattacharyya K. A Femtosecond Study of Solvation Dynamics and Anisotropy Decay in a Catanionic Vesicle: Excitation-Wavelength Dependence. Chemphyschem 2008; 9:2848-55. [DOI: 10.1002/cphc.200800658] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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18
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Mitchell-Koch KR, Thompson WH. Infrared spectra of a model phenol-amine proton transfer complex in nanoconfined CH3Cl. J Phys Chem B 2008; 112:7448-59. [PMID: 18517239 DOI: 10.1021/jp076714e] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The vibrational spectra of a model phenol-amine proton transfer complex dissolved in CH3Cl solvent confined in a 12 A radius spherical hydrophobic cavity were calculated using mixed quantum-classical molecular dynamics simulations. The reaction free energy of the proton transfer complex was varied in order to explore the contributions to the vibrational absorption band from product and reactant species. The vibrational spectra of the model proton transfer complex resulted in motionally narrowed spectral linewidths with two distinct peaks for products and reactants in cases where the system undergoes chemical exchange. It was found that the n=1 and n=2 vibrational excited states combine to form diabatic states such that the spectra have contributions from both n=0 --> n=1 and n=0 --> n=2 transitions. A strong relationship between the instantaneous vibrational frequency and a collective solvent coordinate was found that assists in understanding the origin of the spectral features.
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Dey S, Adhikari A, Mandal U, Ghosh S, Bhattacharyya K. A Femtosecond Study of Excitation Wavelength Dependence of a Triblock Copolymer−Surfactant Supramolecular Assembly: (PEO)20−(PPO)70−(PEO)20 and CTAC. J Phys Chem B 2008; 112:5020-6. [DOI: 10.1021/jp8002257] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Shantanu Dey
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Aniruddha Adhikari
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Ujjwal Mandal
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Subhadip Ghosh
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Kankan Bhattacharyya
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
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Adhikari A, Dey S, Mandal U, Das DK, Ghosh S, Bhattacharyya K. Femtosecond Solvation Dynamics in Different Regions of a Bile Salt Aggregate: Excitation Wavelength Dependence. J Phys Chem B 2008; 112:3575-80. [DOI: 10.1021/jp7106445] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Aniruddha Adhikari
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Shantanu Dey
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Ujjwal Mandal
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Dibyendu Kumar Das
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Subhadip Ghosh
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Kankan Bhattacharyya
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
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21
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Kim H, Kapral R. Proton and Deuteron Transfer Reactions in Molecular Nanoclusters. Chemphyschem 2008; 9:470-4. [DOI: 10.1002/cphc.200700709] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Ghosh S, Dey S, Mandal U, Adhikari A, Mondal SK, Bhattacharyya K. Ultrafast Proton Transfer of Pyranine in a Supramolecular Assembly: PEO−PPO−PEO Triblock Copolymer and CTAC. J Phys Chem B 2007; 111:13504-10. [DOI: 10.1021/jp072919b] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Subhadip Ghosh
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Shantanu Dey
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Ujjwal Mandal
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Aniruddha Adhikari
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Sudip Kumar Mondal
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
| | - Kankan Bhattacharyya
- Physical Chemistry Department, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700 032, India
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Ghosh S, Mandal U, Adhikari A, Dey S, Bhattacharyya K. Study of organized and biological systems using an ultrafast laser. INT REV PHYS CHEM 2007. [DOI: 10.1080/01442350701416888] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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25
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Kim H, Kapral R. Solvation and proton transfer in polar molecule nanoclusters. J Chem Phys 2006; 125:234309. [PMID: 17190560 DOI: 10.1063/1.2404956] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Proton transfer in a phenol-amine complex dissolved in polar molecule nanoclusters is investigated. The proton transfer rates and mechanisms, as well as the solvation of the complex in the cluster, are studied using both adiabatic and nonadiabatic dynamics. The phenol-amine complex exists in ionic and covalent forms and as the size of the cluster increases the ionic form gains stability at the expense of the covalent form. Both the adiabatic and nonadiabatic transfer reaction rates increase with cluster size. Given a fixed cluster size, the stability of the covalent state increases with increasing temperature. The proton transfer rates do not change monotonously with an increase in temperature. A strong correlation between the solvent polarization reaction coordinate and the location of the phenol-amine complex in the cluster is found. The ionic form of the complex strongly prefers the interior of the cluster while the covalent form prefers to lie on the cluster surface.
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Affiliation(s)
- Hyojoon Kim
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada.
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