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Zhou H, Ruan M, Liu QY, Zhao YX, Wang RY, Yang Y, He SG. Size-dependent reactivity of V nO + ( n = 1-9) clusters with ethane. Phys Chem Chem Phys 2024; 26:14186-14193. [PMID: 38713092 DOI: 10.1039/d4cp00857j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
Cost-effective and readily accessible 3d transition metals (TMs) have been considered as promising candidates for alkane activation while 3d TMs especially the early TMs are usually not very reactive with light alkanes. In this study, the reactivity of Vn+ and VnO+ (n = 1-9) cluster cations towards ethane under thermal collision conditions has been investigated using mass spectrometry and density functional theory calculations. Among Vn+ (n = 1-9) clusters, only V3-5+ can react with C2H6 to generate dehydrogenation products and the reaction rate constants are below 10-13 cm3 molecule-1 s-1. In contrast, the reaction rate constants for all VnO+ (n = 1-9) with C2H6 significantly increase by about 2-4 orders of magnitude. Theoretical analysis evidences that the addition of ligand O affects the charge distribution of the metal centers, resulting in a significant increase in the cluster reactivity. The analysis of frontier orbitals indicates that the agostic interaction determines the size-dependent reactivity of VnO+ cluster cations. This study provides a novel approach for improving the reactivity of early 3d TMs.
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Affiliation(s)
- Hang Zhou
- Henan Key Laboratory of Crystalline Molecular Functional Materials, College of Chemistry, Zhengzhou University, Zhengzhou 450001, P. R. China.
| | - Man Ruan
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
| | - Qing-Yu Liu
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
- Beijing National Laboratory for Molecular Sciences and CAS Research/Education Centre of Excellence in Molecular Sciences, Beijing 100190, P. R. China
| | - Yan-Xia Zhao
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
- Beijing National Laboratory for Molecular Sciences and CAS Research/Education Centre of Excellence in Molecular Sciences, Beijing 100190, P. R. China
| | - Rui-Yong Wang
- Henan Key Laboratory of Crystalline Molecular Functional Materials, College of Chemistry, Zhengzhou University, Zhengzhou 450001, P. R. China.
| | - Yuan Yang
- Henan Key Laboratory of Crystalline Molecular Functional Materials, College of Chemistry, Zhengzhou University, Zhengzhou 450001, P. R. China.
| | - Sheng-Gui He
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
- Beijing National Laboratory for Molecular Sciences and CAS Research/Education Centre of Excellence in Molecular Sciences, Beijing 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
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Kirchner B, Blasius J, Esser L, Reckien W. Predicting Vibrational Spectroscopy for Flexible Molecules and Molecules with Non‐Idle Environments. ADVANCED THEORY AND SIMULATIONS 2020. [DOI: 10.1002/adts.202000223] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Barbara Kirchner
- Mulliken Center for Theoretical Chemistry Rheinische Friedrich‐Wilhelms‐Universität Bonn Beringstr. 4+6 D‐53115 Bonn Germany
| | - Jan Blasius
- Mulliken Center for Theoretical Chemistry Rheinische Friedrich‐Wilhelms‐Universität Bonn Beringstr. 4+6 D‐53115 Bonn Germany
| | - Lars Esser
- Mulliken Center for Theoretical Chemistry Rheinische Friedrich‐Wilhelms‐Universität Bonn Beringstr. 4+6 D‐53115 Bonn Germany
| | - Werner Reckien
- Mulliken Center for Theoretical Chemistry Rheinische Friedrich‐Wilhelms‐Universität Bonn Beringstr. 4+6 D‐53115 Bonn Germany
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Blasius J, Kirchner B. Cluster-Weighting in Bulk Phase Vibrational Circular Dichroism. J Phys Chem B 2020; 124:7272-7283. [DOI: 10.1021/acs.jpcb.0c06313] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jan Blasius
- Mulliken Center for Theoretical Chemistry, Rheinische Friedrich-Wilhelms-Universität Bonn, Beringstr. 4+6, D-53115 Bonn, Germany
| | - Barbara Kirchner
- Mulliken Center for Theoretical Chemistry, Rheinische Friedrich-Wilhelms-Universität Bonn, Beringstr. 4+6, D-53115 Bonn, Germany
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Grabska J, Beć KB, Ozaki Y, Huck CW. Temperature Drift of Conformational Equilibria of Butyl Alcohols Studied by Near-Infrared Spectroscopy and Fully Anharmonic DFT. J Phys Chem A 2017; 121:1950-1961. [DOI: 10.1021/acs.jpca.7b00646] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Justyna Grabska
- Institute
of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, Innrain 80-82, 6020 Innsbruck, Austria
- Faculty
of Chemistry, University of Wrocław, F. Joliot-Curie 14, 50-383 Wrocław, Poland
- Department
of Chemistry, School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda, Hyogo 669-1337, Japan
| | - Krzysztof B. Beć
- Institute
of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, Innrain 80-82, 6020 Innsbruck, Austria
- Department
of Chemistry, School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda, Hyogo 669-1337, Japan
| | - Yukihiro Ozaki
- Department
of Chemistry, School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda, Hyogo 669-1337, Japan
| | - Christian W. Huck
- Institute
of Analytical Chemistry and Radiochemistry, Leopold-Franzens University, Innrain 80-82, 6020 Innsbruck, Austria
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Thomas M, Kirchner B. Classical Magnetic Dipole Moments for the Simulation of Vibrational Circular Dichroism by ab Initio Molecular Dynamics. J Phys Chem Lett 2016; 7:509-513. [PMID: 26771403 DOI: 10.1021/acs.jpclett.5b02752] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
We present a new approach for calculating vibrational circular dichroism spectra by ab initio molecular dynamics. In the context of molecular dynamics, these spectra are given by the Fourier transform of the cross-correlation function of magnetic dipole moment and electric dipole moment. We obtain the magnetic dipole moment from the electric current density according to the classical definition. The electric current density is computed by solving a partial differential equation derived from the continuity equation and the condition that eddy currents should be absent. In combination with a radical Voronoi tessellation, this yields an individual magnetic dipole moment for each molecule in a bulk phase simulation. Using the chiral alcohol 2-butanol as an example, we show that experimental spectra are reproduced very well. Our approach requires knowing only the electron density in each simulation step, and it is not restricted to any particular electronic structure method.
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Affiliation(s)
- Martin Thomas
- Mulliken Center for Theoretical Chemistry, Rheinische Friedrich-Wilhelms-Universität Bonn , Beringstraße 4, 53115 Bonn, Germany
| | - Barbara Kirchner
- Mulliken Center for Theoretical Chemistry, Rheinische Friedrich-Wilhelms-Universität Bonn , Beringstraße 4, 53115 Bonn, Germany
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6
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Parker SF, Silverwood IP, Hamilton NG, Lennon D. Structural and spectroscopic characterisation of C4 oxygenates relevant to structure/activity relationships of the hydrogenation of α,β-unsaturated carbonyls. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2016; 153:289-297. [PMID: 26318704 DOI: 10.1016/j.saa.2015.08.034] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2015] [Revised: 08/11/2015] [Accepted: 08/16/2015] [Indexed: 06/04/2023]
Abstract
In the present work, we have investigated the conformational isomerism and calculated the vibrational spectra of the C4 oxygenates: 3-butyne-2-one, 3-butene-2-one, 2-butanone and 2-butanol using density functional theory. The calculations are validated by comparison to structural data where available and new, experimental inelastic neutron scattering and infrared spectra of the compounds. We find that for 3-butene-2-one and 2-butanol the spectra show clear evidence for the presence of conformational isomerism and this is supported by the calculations. Complete vibrational assignments for all four molecules are provided and this provides the essential information needed to generate structure/activity relationships for the sequential catalytic hydrogenation of 3-butyne-2-one to 2-butanol.
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Affiliation(s)
- Stewart F Parker
- ISIS Facility, STFC Rutherford Appleton Laboratory, Chilton, Didcot, Oxon OX11 0QX, UK.
| | - Ian P Silverwood
- School of Chemistry, Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, Scotland, UK
| | - Neil G Hamilton
- School of Chemistry, Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, Scotland, UK
| | - David Lennon
- School of Chemistry, Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, Scotland, UK
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Hu X, Rosenberg RA, Trenary M. Thermal and electron-induced decomposition of 2-butanol on Pt(111). J Phys Chem A 2011; 115:5785-93. [PMID: 21261270 DOI: 10.1021/jp108626q] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The adsorption, thermal evolution, and electron irradiation of 2-butanol on Pt(111) were investigated with reflection absorption infrared spectroscopy (RAIRS). A simulated vibrational spectrum of a single 2-butanol molecule was calculated using density functional theory to facilitate vibrational assignments. Exposures of 0.2 Langmuir (L) and lower result in both isolated 2-butanol molecules with minimal lateral interactions and hydrogen-bonded clusters. The thermal evolution following a 4.0 L exposure shows that the hydrogen-bonded multilayer desorbs around 170 K, leaving a 2-butanol monolayer where hydrogen bonding still exists. At 190 K, a new feature at 1699 cm(-1) is attributed to the formation of butanone. Irradiation with 750 or 100 eV electrons leads to 2-butanol desorption and partial conversion to butanone, as indicated by the appearance of a peak at 1709 cm(-1).
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Affiliation(s)
- Xiaofeng Hu
- Department of Chemistry, University of Illinois at Chicago, Chicago, Illinois 60607, USA
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8
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Longhi G, Abbate S, Scafato P, Rosini C. A vibrational circular dichroism approach to the determination of the absolute configuration of flexible and transparent molecules: fluorenone ketals of 1,n-diols. Phys Chem Chem Phys 2010; 12:4725-32. [DOI: 10.1039/b913213a] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Abbate S, Burgi LF, Gangemi F, Gangemi R, Lebon F, Longhi G, Pultz VM, Lightner DA. Comparative Analysis of IR and Vibrational Circular Dichroism Spectra for a Series of Camphor-Related Molecules. J Phys Chem A 2009; 113:11390-405. [DOI: 10.1021/jp905644d] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sergio Abbate
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - Luigi Filippo Burgi
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - Fabrizio Gangemi
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - Roberto Gangemi
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - France Lebon
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - Giovanna Longhi
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - Vaughan M. Pultz
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
| | - David A. Lightner
- Dipartimento di Scienze Biomediche e Biotecnologie, Università di Brescia, Viale Europa 11, 25123 Brescia, Italy, Consorzio Interuniversitario per le Scienze Fisiche della Materia, CNISM, via della Vasca Navale, 84, 00146, Roma, Italy, Department of Chemistry, Truman State University, Kirksville, Missouri 63501, and Department of Chemistry, University of Nevada, Reno, Nevada 89557
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Nicu VP, Baerends EJ. Robust normal modes in vibrational circular dichroism spectra. Phys Chem Chem Phys 2009; 11:6107-18. [DOI: 10.1039/b823558a] [Citation(s) in RCA: 79] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Mori T, Inoue Y, Grimme S. Quantum Chemical Study on the Circular Dichroism Spectra and Specific Rotation of Donor−Acceptor Cyclophanes. J Phys Chem A 2007; 111:7995-8006. [PMID: 17629260 DOI: 10.1021/jp073596m] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The structures of donor,acceptor-substituted cyclophanes were optimized by DFT and MP2 methods and compared with the X-ray crystallographic structures. The electronic circular dichroism (CD) spectra of these chiral cyclophanes were simulated by time dependent density functional theory (TD-DFT) with several functionals including different amounts of "exact" Hartree-Fock exchange. The experimental oscillator and rotatory strengths were best reproduced by the BH-LYP/TZV2P method. The specific rotation and vibrational circular dichroism (VCD) spectra were also calculated at the BH-LYP/aug-cc-pVDZ and B3-LYP/6-31G(d) levels, respectively, and compared with the experimental data. Better performance was obtained with the ECD, rather than the specific rotation or the VCD spectral calculations in view of the computation time and accuracy for the determination of absolute configuration (AC). The exciton coupling model can be applied only for the cyclophanes without CT-character. However, the split pattern found in the experiment does not appear to originate from a simple two-transition coupling, indicating that this method should be applied with caution to the AC determination. This conclusion was supported by the TD-DFT investigations of the transition moments and the roles of excited-state electronic configuration associated with these split bands. Cyclophanes with donor-acceptor interactions showed Cotton effects at the CT band and couplets at the 1La and 1Lb bands. Although the degree of charge transfer between the rings is very small, as revealed by a Mulliken-Hash analysis, the split Cotton effects are due to a large separation in energy of the donor and acceptor orbitals. The effect of the distance and angle between the donor and acceptor moieties in model (intermolecular) CT complexes on the calculated CD spectra was also studied and compared with those obtained for various paracyclophanes.
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Affiliation(s)
- Tadashi Mori
- Department of Molecular Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita 565-0871, Japan.
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Sato H, Taniguchi T, Nakahashi A, Monde K, Yamagishi A. Effects of Central Metal Ions on Vibrational Circular Dichroism Spectra of Tris-(β-diketonato)metal(III) Complexes. Inorg Chem 2007; 46:6755-66. [PMID: 17625835 DOI: 10.1021/ic070300i] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Vibrational circular dichroism (VCD) spectra of a series of [M(III)(acac)3] (acac = acetylacetonato; M = Cr, Co, Ru, Rh, Ir, and Al) and [M(III)(acac)2(dbm)] (dbm = dibenzoylmethanato; M = Cr, Co, and Ru) have been investigated experimentally and/or theoretically in order to see the effect of the central metal ion on the vibrational dynamics of ligands. The optical antipodes give the mirror-imaged spectra in the region of 1700-1000 cm(-1). The remarkable effect of the central metal ion is observed experimentally on the VCD peaks due to C-O stretches (1500-1300 cm(-1)) for both [M(III)(acac)3] and [M(III)(acac)2(dbm)]. In the case of Delta-[M(III)(acac)3], for example, the order of frequency of two C-O stretches (E and A2 symmetries) is dependent on the kind of a central metal ion as follows: E (-) > A2 (+) for M = Co, Rh, and Ir, while A2 (+) > E (-) for M = Cr and Ru. In the case of Delta-[M(III)(acac)2(dbm)], the order of frequency of three C-O stretches (A, B, and B symmetries) is as follows: A (-) > B (+) > B (+) for Co(III), B (+) > A (-) > B (-) for Cr(III), and A (-) > B (+) > B (-) for Ru(III). These results imply that the energy levels of C-O stretches are delicately affected by the kind of central metal ion. Since such detailed information is not obtained from the IR spectra alone, the VCD spectrum can probe the effect of the central metal ion on interligand cooperative vibration modes.
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Affiliation(s)
- Hisako Sato
- Department of Earth and Planetary Science, Graduate School of Science, The University of Tokyo, Tokyo, Japan
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Mori T, Inoue Y, Grimme S. Time Dependent Density Functional Theory Calculations for Electronic Circular Dichroism Spectra and Optical Rotations of Conformationally Flexible Chiral Donor−Acceptor Dyad. J Org Chem 2006; 71:9797-806. [PMID: 17168599 DOI: 10.1021/jo061855i] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Twelve conformations of a chiral donor-acceptor (charge-transfer) dyad and six conformations of its dimer complex were structurally optimized by using the Kohn-Sham density functional theory (BLYP/TZV2P) incorporating a recently developed empirical correction scheme that uses C6/R6 potentials for van der Waals interactions (DFT-D). Subsequent time-dependent DFT calculations with BH-LYP and B3-LYP functionals (with triple-zeta basis set) were performed to obtain theoretical circular dichroism (CD) spectra. The experimental CD spectra obtained independently were properly reproduced by averaging the calculated spectra of individual conformers according to a Boltzmann population derived from single-point SCS-MP2 energies. The optical rotations of the monomer were also calculated by using the same functionals with an aug-cc-pVDZ basis set. Dielectric continuum solvation models (COSMO) applied to correct the relative energies from the isolated molecule calculations resulted in conformer distributions that piled the same or even poorer level of agreement with the experimental CD spectrum. Our results clearly show the advantage of the DFT-D method for the geometry optimization of large systems with donor-acceptor interactions and the TD-DFT/BH-LYP calculations for reproducing the experimental CD spectra. As compared with the calculated optical rotations, the wealthy information embedded in the experimental/calculated CD spectra is requisite for the configurational and/or conformational analyses of relatively large and flexible chiral organic molecules in solution.
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Affiliation(s)
- Tadashi Mori
- Department of Molecular Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita 565-0871, Japan.
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