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Codesal MD, David AHG, Santos CIM, Álvaro-Martins MJ, Maçôas E, Campaña AG, Blanco V. Curved Nanographenes as Stoppers in a [2]Rotaxane with Two-Photon Excited Emission. J Org Chem 2024; 89:9344-9351. [PMID: 38907714 PMCID: PMC11232015 DOI: 10.1021/acs.joc.4c00486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/24/2024]
Abstract
Heptagon-containing distorted nanographenes are used as stoppers for the capping of a [2]rotaxane through a Michael-type addition reaction to vinyl sulfone groups. These curved aromatics are bulky enough to prevent the disassembly of the rotaxane but also give emissive and nonlinear (two-photon absorption and emission) optical properties to the structure.
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Affiliation(s)
- Marcos D Codesal
- Departamento de Química Orgánica, Unidad de Excelencia de Química, Facultad de Ciencias, Universidad de Granada, Avda. Fuente Nueva s/n, 18071 Granada, Spain
| | - Arthur H G David
- Departamento de Química Orgánica, Unidad de Excelencia de Química, Facultad de Ciencias, Universidad de Granada, Avda. Fuente Nueva s/n, 18071 Granada, Spain
| | - Carla I M Santos
- Centro de Química Estrutural and Institute of Molecular Sciences, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1, 1049-001 Lisboa, Portugal
| | - Maria J Álvaro-Martins
- Centro de Química Estrutural and Institute of Molecular Sciences, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1, 1049-001 Lisboa, Portugal
| | - Ermelinda Maçôas
- Centro de Química Estrutural and Institute of Molecular Sciences, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1, 1049-001 Lisboa, Portugal
| | - Araceli G Campaña
- Departamento de Química Orgánica, Unidad de Excelencia de Química, Facultad de Ciencias, Universidad de Granada, Avda. Fuente Nueva s/n, 18071 Granada, Spain
| | - Victor Blanco
- Departamento de Química Orgánica, Unidad de Excelencia de Química, Facultad de Ciencias, Universidad de Granada, Avda. Fuente Nueva s/n, 18071 Granada, Spain
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Ghasemi M, Jeong H, Kim D, Kim B, Jang JI, Oh K. Linear and nonlinear optical properties of transfer ribonucleic acid (tRNA) thin solid films. RSC Adv 2022; 12:8661-8667. [PMID: 35424810 PMCID: PMC8984844 DOI: 10.1039/d1ra09412b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Accepted: 03/14/2022] [Indexed: 12/03/2022] Open
Abstract
We successfully obtained transfer ribonucleic acid (tRNA) thin solid films (TSFs) using an aqueous solution precursor in an optimized deposition process. By varying the concentration of RNA and deposition process parameters, uniform solid layers of solid RNA with a thickness of 30 to 46 nm were fabricated consistently. Linear absorptions of RNA TSFs on quartz substrates were experimentally investigated in a wide spectral range covering UV–VIS–NIR to find high transparency for λ > 350 nm. We analyzed the linear refractive indices, n(λ) of tRNA TSFs on silicon substrates by using an ellipsometer in the 400 to 900 nm spectral range to find a linear correlation with the tRNA concentration in the aqueous solution. The thermo-optic coefficient (dn/dT) of the films was also measured to be in a range −4.21 × 10−4 to −5.81 × 10−4 °C−1 at 40 to 90 °C. We furthermore characterized nonlinear refractive index and nonlinear absorption of tRNA TSFs on quartz using a Z-scan method with a femtosecond laser at λ = 795 nm, which showed high potential as an efficient nonlinear optical material in the IR spectral range. Optical measurements of one of the vital biological molecules (RNA) in the human body.![]()
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Affiliation(s)
- Marjan Ghasemi
- Department of Physics, Photonic Device Physics Laboratory, Yonsei University, 50 Yonsei-ro Seodaemun-gu, Seoul 120-749, South Korea
| | - Hayoung Jeong
- Department of Physics, Photonic Device Physics Laboratory, Yonsei University, 50 Yonsei-ro Seodaemun-gu, Seoul 120-749, South Korea
- Center for Quantum Information, Korea Institute of Science and Technology (KIST), Seoul 02792, South Korea
| | - Donggyu Kim
- Department of Physics, Nonlinear Optical Material & Spectroscopy, Sogang University, 35 Baek-beom-ro, Seoul 04107, South Korea
| | - Byungjoo Kim
- Department of Physics, Photonic Device Physics Laboratory, Yonsei University, 50 Yonsei-ro Seodaemun-gu, Seoul 120-749, South Korea
- Center for Quantum Information, Korea Institute of Science and Technology (KIST), Seoul 02792, South Korea
| | - Joon Ik Jang
- Department of Physics, Nonlinear Optical Material & Spectroscopy, Sogang University, 35 Baek-beom-ro, Seoul 04107, South Korea
| | - Kyunghwan Oh
- Department of Physics, Photonic Device Physics Laboratory, Yonsei University, 50 Yonsei-ro Seodaemun-gu, Seoul 120-749, South Korea
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Bertorelle F, Russier-Antoine I, Calin N, Comby-Zerbino C, Bensalah-Ledoux A, Guy S, Dugourd P, Brevet PF, Sanader Ž, Krstić M, Bonačić-Koutecký V, Antoine R. Au 10(SG) 10: A Chiral Gold Catenane Nanocluster with Zero Confined Electrons. Optical Properties and First-Principles Theoretical Analysis. J Phys Chem Lett 2017; 8:1979-1985. [PMID: 28398738 DOI: 10.1021/acs.jpclett.7b00611] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
We report facile synthesis of the Au10(SG)10 nanoclusters, where SG stands for glutathione, found to be promising as a new class of radiosensitizers for cancer radiotherapy. The homoleptic catenane structure with two Au5SG5 interconnected rings, among different isomer structures, gives the best agreement between theoretical and experimental optical spectra and XRD patterns. This catenane structure exhibits a centrosymmetry-broken structure, resulting in enhanced second harmonic response and new characteristic circular dichroism signals in the spectral region of 250-400 nm. This is the first determination of the nonlinear optical properties of a ligated cluster with an equal Au-to-ligand ratio, thus without a metallic core and therefore zero confined electrons. Insight into the nonlinear and chiroptical efficiencies arising from interplay between structural and electronic properties is provided by the TD-DFT approach.
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Affiliation(s)
- Franck Bertorelle
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Isabelle Russier-Antoine
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Nathalie Calin
- Laboratoire de Chimie UMR 5182, Ecole Normale Supérieure de Lyon, CNRS Université Lyon 1 , 46 allée d'Italie, Lyon 69007, France
| | - Clothilde Comby-Zerbino
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Amina Bensalah-Ledoux
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Stephan Guy
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Philippe Dugourd
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Pierre-François Brevet
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
| | - Željka Sanader
- Center of Excellence for Science and Technology-Integration of Mediterranean Region (STIM) at Interdisciplinary Center for Advanced Sciences and Technology (ICAST), University of Split , Meštrovićevo šetalište 45, HR-2100 Split, Republic of Croatia
- Faculty of Science, University of Split , Ruđera Boškovića 33, HR-2100 Split, Republic of Croatia
| | - Marjan Krstić
- Center of Excellence for Science and Technology-Integration of Mediterranean Region (STIM) at Interdisciplinary Center for Advanced Sciences and Technology (ICAST), University of Split , Meštrovićevo šetalište 45, HR-2100 Split, Republic of Croatia
| | - Vlasta Bonačić-Koutecký
- Center of Excellence for Science and Technology-Integration of Mediterranean Region (STIM) at Interdisciplinary Center for Advanced Sciences and Technology (ICAST), University of Split , Meštrovićevo šetalište 45, HR-2100 Split, Republic of Croatia
- Department of Chemistry, Humboldt Universität zu Berlin , Brook-Taylor Strasse 2, 12489 Berlin, Germany
| | - Rodolphe Antoine
- Institut Lumière Matière, UMR 5306, Université Claude Bernard Lyon 1, CNRS , F-69622 Lyon, France
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Rinaldi JM, Morton SM, Jensen L. A discrete interaction model/quantum mechanical method for simulating nonlinear optical properties of molecules near metal surfaces. Mol Phys 2013. [DOI: 10.1080/00268976.2013.793419] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- John Michael Rinaldi
- a Department of Chemistry , The Pennsylvania State University , University Park , PA , USA
| | - Seth Michael Morton
- a Department of Chemistry , The Pennsylvania State University , University Park , PA , USA
| | - Lasse Jensen
- a Department of Chemistry , The Pennsylvania State University , University Park , PA , USA
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Lee C, Maeng G, Kim HW, Sohlberg K. Quantum mechanical modeling of a tripodal [2]rotaxane and its binding to TiO2. COMPUT THEOR CHEM 2011. [DOI: 10.1016/j.comptc.2011.02.032] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Battistini G, Cozzi PG, Jalkanen JP, Montalti M, Prodi L, Zaccheroni N, Zerbetto F. The erratic emission of pyrene on gold nanoparticles. ACS NANO 2008; 2:77-84. [PMID: 19206550 DOI: 10.1021/nn700241w] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Gold nanoparticles functionalized with chromophores are known to present unpredictable fluorescence as a function of their structure. Odd-even effects, based on the number of methylene units of the chain to which the fluorophore is attached, and the nature of the anchoring group on the gold surface have, in the past, been suggested to be responsible for the behavior. Here we investigate the fluorescence processes of two newly synthesized pyrene derivatives bound to gold nanoparticles. Two structurally identical ligands, differing only in the nature of the anchoring group (a thiolate in one case and an amine in the other), were newly synthetized and attached to the gold nanoparticles. The same changes in the fluorescence properties, namely, a red spectral shift with a moderate increase of the quantum yield and a shortening of the excited-state lifetime, are observed in the two cases and ascribed to the proximity of the gold core. By comparison with the results reported for other pyrene derivatives, it has been possible to draw the conclusions that (i) the nature of the binding group does not affect the fluorescence properties of the fluorophores attached to the nanoparticle surface and (ii) much stronger fluorescence is observed in the case of pyrene separated from the gold by short alkyl chain. The unusual behavior is explained in simple terms of competing chain-chain and chromophore-chromophore interactions and by means of proper energy diagrams.
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Affiliation(s)
- Gionata Battistini
- Dipartimento di Chimica G. Ciamician, Università di Bologna, Via Selmi 2, I-40126 Bologna, Italy
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