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Bae G. Density Functional Theory Calculations of Geometrical and Electronic Properties of Neutral and Charged Silicon Oxide Clusters. B KOREAN CHEM SOC 2019. [DOI: 10.1002/bkcs.11818] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Gyun‐Tack Bae
- Department of Chemistry EducationChungbuk National University Cheongju 28644 South Korea
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2
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Lepeshkin SV, Baturin VS, Uspenskii YA, Oganov AR. Method for Simultaneous Prediction of Atomic Structure and Stability of Nanoclusters in a Wide Area of Compositions. J Phys Chem Lett 2019; 10:102-106. [PMID: 30560675 DOI: 10.1021/acs.jpclett.8b03510] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
We present a universal method for the large-scale prediction of the atomic structure of clusters. Our algorithm performs the joint evolutionary search for all clusters in a given area of the compositional space and takes advantage of structural similarities frequently observed in clusters of close compositions. The resulting speedup is up to 50 times compared to current methods. This enables first-principles studies of multicomponent clusters with full coverage of a wide range of compositions. As an example, we report an unprecedented first-principles global optimization of 315 Si nO m clusters with n ≤ 15 and m ≤ 20. The obtained map of Si-O cluster stability shows the existence of both expected (SiO2) n and unexpected (e.g., Si4O18) stable (magic) clusters, which can be important for a variety of applications.
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Affiliation(s)
- S V Lepeshkin
- Skolkovo Institute of Science and Technology , Skolkovo Innovation Center , Nobel St. 3 , Moscow 143026 , Russia
- P.N. Lebedev Physical Institute of the Russian Academy of Sciences , Leninskii prosp. 53 , 119991 Moscow , Russia
| | - V S Baturin
- Skolkovo Institute of Science and Technology , Skolkovo Innovation Center , Nobel St. 3 , Moscow 143026 , Russia
- P.N. Lebedev Physical Institute of the Russian Academy of Sciences , Leninskii prosp. 53 , 119991 Moscow , Russia
| | - Yu A Uspenskii
- P.N. Lebedev Physical Institute of the Russian Academy of Sciences , Leninskii prosp. 53 , 119991 Moscow , Russia
| | - Artem R Oganov
- Skolkovo Institute of Science and Technology , Skolkovo Innovation Center , Nobel St. 3 , Moscow 143026 , Russia
- Moscow Institute of Physics and Technology , Dolgoprudny , Moscow Region 141700 , Russia
- Northwestern Polytechnical University , Xi'an , Shaanxi 710072 , People's Republic of China
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3
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Bromley ST, Gómez Martín JC, Plane JMC. Under what conditions does (SiO) N nucleation occur? A bottom-up kinetic modelling evaluation. Phys Chem Chem Phys 2018; 18:26913-26922. [PMID: 27722645 DOI: 10.1039/c6cp03629e] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Silicon monoxide (SiO) is a structurally complex compound exhibiting differentiated oxide-rich and silicon-rich nano-phases at length scales covering nanoclusters to the bulk. Although nano-sized and nano-segregated SiO has great technological potential (e.g. nano-silicon for optical applications) and is of enormous astronomical interest (e.g. formation of silicate cosmic dust) an accurate general description of SiO nucleation is lacking. Avoiding the deficiencies of a bulk-averaged approach typified by classical nucleation theory (CNT) we employ a bottom-up kinetic model which fully takes into account the atomistic details involved in segregation. Specifically, we derive a new low energy benchmark set of segregated (SiO)N cluster ground state candidates for N ≤ 20 and use the accurately calculated properties of these isomers to calculate SiO nucleation rates. We thus provide a state-of-the art evaluation of the range of pressure and temperature conditions for which formation of SiO will or will not proceed. Our results, which match with available experiment, reveal significant deficiencies with CNT approaches. We employ our model to shed light on controversial issue of circumstellar silicate dust formation showing that, at variance with the predictions from CNT-based calculations, pure SiO nucleation under such conditions is not viable.
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Affiliation(s)
- Stefan T Bromley
- Departament de Ciència de Materials i Química Física & Institut de Química Teòrica i Computacional (IQTCUB), Universitat de Barcelona, C/ Martí i Franquès 1, E-08028 Barcelona, Spain. and Institució Catalana de Recerca i Estudis Avançats (ICREA), 08010 Barcelona, Spain
| | | | - John M C Plane
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
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4
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Arakawa M, Yamane R, Terasaki A. Reaction Sites of CO on Size-Selected Silicon Oxide Cluster Anions: A Model Study of Chemistry in the Interstellar Environment. J Phys Chem A 2015; 120:139-44. [DOI: 10.1021/acs.jpca.5b08900] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Masashi Arakawa
- Department
of Chemistry,
Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Ryo Yamane
- Department
of Chemistry,
Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Akira Terasaki
- Department
of Chemistry,
Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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5
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Savoca M, Langer J, Harding DJ, Palagin D, Reuter K, Dopfer O, Fielicke A. Vibrational spectra and structures of bare and Xe-tagged cationic SinOm+ clusters. J Chem Phys 2014; 141:104313. [DOI: 10.1063/1.4894406] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Marco Savoca
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
| | - Judith Langer
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
| | - Dan J. Harding
- Institut für Physikalische Chemie, Georg-August-Universität Göttingen, Tammannstr. 6, 37077 Göttingen, Germany
| | - Dennis Palagin
- Lehrstuhl für Theoretische Chemie, Technische Universität München, Lichtenbergstr. 4, 85747 Garching, Germany
| | - Karsten Reuter
- Lehrstuhl für Theoretische Chemie, Technische Universität München, Lichtenbergstr. 4, 85747 Garching, Germany
| | - Otto Dopfer
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
| | - André Fielicke
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
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6
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Du HB, Huang SP, De Sarkar A, Fan WJ, Jia Y, Zhang RQ. Electronic and Vibrational Properties of Stable Isomers of (SiO)n(0,±) (n = 2–7) Clusters. J Phys Chem A 2014; 118:8893-900. [DOI: 10.1021/jp412682f] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Hong-Bo Du
- Department of Physics
and Materials Science, City University of Hong Kong, Kowloon, Hong Kong SAR, China
- Center for Clean Energy and Quantum Structures, School
of Physics and Engineering, Zhengzhou University, Zhengzhou, Henan 450052, China
| | - Shu-Ping Huang
- Department of Physics
and Materials Science, City University of Hong Kong, Kowloon, Hong Kong SAR, China
| | - Abir De Sarkar
- Department of Physics
and Materials Science, City University of Hong Kong, Kowloon, Hong Kong SAR, China
- Institute of Nano Science and Technology, Phase X, Sector 64, Mohali, Punjab 160 062, India
| | - Wen-Jie Fan
- School
of Chemical and Environmental Engineering, Liaoning University of Technology, Jinzhou 121001, China
| | - Yu Jia
- Center for Clean Energy and Quantum Structures, School
of Physics and Engineering, Zhengzhou University, Zhengzhou, Henan 450052, China
| | - Rui-Qin Zhang
- Department of Physics
and Materials Science, City University of Hong Kong, Kowloon, Hong Kong SAR, China
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7
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Sen K, Ghosh D, Pakhira S, Banu T, Das AK. Structure, stability, and dissociation of small ionic silicon oxide clusters [SiO(n)+ (n = 3, 4)]: insight from density functional and topological exploration. J Chem Phys 2013; 139:234303. [PMID: 24359363 DOI: 10.1063/1.4840455] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
The structures, energies, isomerization, and decomposition pathways of small ionic silicon oxide clusters, SiO(n)(+) (n = 3, 4), on doublet and quartet energy surfaces are investigated by density functional theory. New structural isomers of these ionic clusters have been obtained with this systematic study. The energy ordering of the isomeric cluster ions on doublet spin surface is found to follow the same general trend as that of the neutral ones, while it differs on the quartet surface. Our computational results reveal the energetically most preferred decomposition pathways of the ionic clusters on both spin surfaces. To comprehend the reaction mechanism, bonding evolution theory has also been employed using atoms in molecules formalism. The possible reasons behind the structural deformation of some isomers on quartet surface have also been addressed. Our results are expected to provide important insight into the decomposition mechanism and relative stability of the SiO(n)(+) clusters on both the energy surfaces.
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Affiliation(s)
- Kaushik Sen
- Department of Spectroscopy, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Deepanwita Ghosh
- Department of Spectroscopy, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Srimanta Pakhira
- Department of Spectroscopy, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Tahamida Banu
- Department of Spectroscopy, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
| | - Abhijit K Das
- Department of Spectroscopy, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India
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Catlow CRA, Bromley ST, Hamad S, Mora-Fonz M, Sokol AA, Woodley SM. Modelling nano-clusters and nucleation. Phys Chem Chem Phys 2009; 12:786-811. [PMID: 20066364 DOI: 10.1039/b916069h] [Citation(s) in RCA: 165] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
We review the growing role of computational techniques in modelling the structures and properties of nano-particulate oxides and sulphides. We describe the main methods employed, including those based on both electronic structure and interatomic potential approaches. Particular attention is paid to the techniques used in searching for global minima in the energy landscape defined by the nano-particle cluster. We summarise applications to the widely studied ZnO and ZnS systems, to silica nanochemistry and to group IV oxides including TiO(2). We also consider the special case of silica cluster chemistry in solution and its importance in understanding the hydrothermal synthesis of microporous materials. The work summarised, together with related experimental studies, demonstrates a rich and varied nano-cluster chemistry for these materials.
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Affiliation(s)
- C Richard A Catlow
- University College London, Department of Chemistry, Materials Chemistry, 3rd Floor, Kathleen Lonsdale Building, Gower Street, London, UKWC1E 6BT
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9
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Tiznado W, Oña OB, Caputo MC, Ferraro MB, Fuentealba P. Theoretical Study of the Structure and Electronic Properties of Si3On− and Si6On− (n = 1−6) Clusters. Fragmentation and Formation Patterns. J Chem Theory Comput 2009; 5:2265-73. [DOI: 10.1021/ct900320r] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- William Tiznado
- Departamento de Ciencias Químicas, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, Av. República 275, Santiago-Chile, Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria - Pab. I., Argentina, and Departamento de Física, Universidad de Chile, Las Palmeras 3425, Santiago-Chile
| | - Ofelia B. Oña
- Departamento de Ciencias Químicas, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, Av. República 275, Santiago-Chile, Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria - Pab. I., Argentina, and Departamento de Física, Universidad de Chile, Las Palmeras 3425, Santiago-Chile
| | - María C. Caputo
- Departamento de Ciencias Químicas, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, Av. República 275, Santiago-Chile, Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria - Pab. I., Argentina, and Departamento de Física, Universidad de Chile, Las Palmeras 3425, Santiago-Chile
| | - Marta B. Ferraro
- Departamento de Ciencias Químicas, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, Av. República 275, Santiago-Chile, Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria - Pab. I., Argentina, and Departamento de Física, Universidad de Chile, Las Palmeras 3425, Santiago-Chile
| | - Patricio Fuentealba
- Departamento de Ciencias Químicas, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, Av. República 275, Santiago-Chile, Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria - Pab. I., Argentina, and Departamento de Física, Universidad de Chile, Las Palmeras 3425, Santiago-Chile
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10
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Caputo MC, Oña O, Ferraro MB. Theoretical prediction of atomic and electronic structure of neutral Si6Om (m=1–11) clusters. J Chem Phys 2009; 130:134115. [DOI: 10.1063/1.3080549] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
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11
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Alcoba DR, Oña O, Torre A, Lain L, Bochicchio RC. Determination of Energies and Electronic Densities of Functional Groups According to Partitionings in the Physical Space. J Phys Chem A 2008; 112:10023-8. [DOI: 10.1021/jp804225x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Diego R. Alcoba
- Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, 1428, Buenos Aires, Argentina, and Departamento de Química Física, Facultad de Ciencias, Universidad del País Vasco, Apdo. 644, E-48080, Bilbao, Spain
| | - Ofelia Oña
- Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, 1428, Buenos Aires, Argentina, and Departamento de Química Física, Facultad de Ciencias, Universidad del País Vasco, Apdo. 644, E-48080, Bilbao, Spain
| | - Alicia Torre
- Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, 1428, Buenos Aires, Argentina, and Departamento de Química Física, Facultad de Ciencias, Universidad del País Vasco, Apdo. 644, E-48080, Bilbao, Spain
| | - Luis Lain
- Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, 1428, Buenos Aires, Argentina, and Departamento de Química Física, Facultad de Ciencias, Universidad del País Vasco, Apdo. 644, E-48080, Bilbao, Spain
| | - Roberto C. Bochicchio
- Departamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, 1428, Buenos Aires, Argentina, and Departamento de Química Física, Facultad de Ciencias, Universidad del País Vasco, Apdo. 644, E-48080, Bilbao, Spain
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12
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Reber AC, Paranthaman S, Clayborne PA, Khanna SN, Castleman AW. From SiO molecules to silicates in circumstellar space: atomic structures, growth patterns, and optical signatures of SinOm clusters. ACS NANO 2008; 2:1729-1737. [PMID: 19206378 DOI: 10.1021/nn7003958] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
SiO is the dominant silicon bearing molecule in the circumstellar medium; however, it agglomerates to form oxygen-rich silicates. Here we present a synergistic effort combining experiments in beams with theoretical investigations to examine mechanisms for this oxygen enrichment. The oxygen enrichment may proceed via two processes, namely, (1) chemically driven compositional separation in (SiO)(n) motifs resulting in oxygen-rich and silicon-rich or pure silicon regions, and (2) reaction between Si(n)O(m) clusters leading to oxygen richer and poorer fragments. While SiO(2) molecules are emitted in selected chemical reactions, they readily oxidize larger Si(n)O(n) clusters in exothermic reactions and are not likely to agglomerate into larger (SiO(2))(n) motifs. Theoretically calculated optical absorption and infrared spectra of Si(n)O(m) clusters exhibit features observed in the extended red emissions and blue luminescence from interstellar medium, indicating that the Si(n)O(m) fragments could be contributing to these spectra.
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Affiliation(s)
- Arthur C Reber
- Department of Physics, Virginia Commonwealth University, Richmond, Virginia 23284, USA
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