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Salahshoori I, Ramezani Z, Cacciotti I, Yazdanbakhsh A, Hossain MK, Hassanzadeganroudsari M. Cisplatin uptake and release assessment from hydrogel synthesized in acidic and neutral medium: An experimental and molecular dynamics simulation study. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.117890] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Casalini T. Not only in silico drug discovery: Molecular modeling towards in silico drug delivery formulations. J Control Release 2021; 332:390-417. [PMID: 33675875 DOI: 10.1016/j.jconrel.2021.03.005] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 02/28/2021] [Accepted: 03/02/2021] [Indexed: 12/18/2022]
Abstract
The use of methods at molecular scale for the discovery of new potential active ligands, as well as previously unknown binding sites for target proteins, is now an established reality. Literature offers many successful stories of active compounds developed starting from insights obtained in silico and approved by Food and Drug Administration (FDA). One of the most famous examples is raltegravir, a HIV integrase inhibitor, which was developed after the discovery of a previously unknown transient binding area thanks to molecular dynamics simulations. Molecular simulations have the potential to also improve the design and engineering of drug delivery devices, which are still largely based on fundamental conservation equations. Although they can highlight the dominant release mechanism and quantitatively link the release rate to design parameters (size, drug loading, et cetera), their spatial resolution does not allow to fully capture how phenomena at molecular scale influence system behavior. In this scenario, the "computational microscope" offered by simulations at atomic scale can shed light on the impact of molecular interactions on crucial parameters such as release rate and the response of the drug delivery device to external stimuli, providing insights that are difficult or impossible to obtain experimentally. Moreover, the new paradigm brought by nanomedicine further underlined the importance of such computational microscope to study the interactions between nanoparticles and biological components with an unprecedented level of detail. Such knowledge is a fundamental pillar to perform device engineering and to achieve efficient and safe formulations. After a brief theoretical background, this review aims at discussing the potential of molecular simulations for the rational design of drug delivery systems.
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Affiliation(s)
- Tommaso Casalini
- Department of Chemistry and Applied Bioscience, Institute for Chemical and Bioengineering, ETH Zurich, Vladimir-Prelog-Weg 1-5/10, Zürich 8093, Switzerland; Polymer Engineering Laboratory, Institute for Mechanical Engineering and Materials Technology, University of Applied Sciences and Arts of Southern Switzerland (SUPSI), Via la Santa 1, Lugano 6962, Switzerland.
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Gainanova A, Kuz’micheva G, Khramov E, Chumakov R, Zybinskiy A, Yashina N. The role of composition and structure of vanadium-doped nanosized titanium( iv) oxides (anatase and η-phase) in the realization of photocatalytic, adsorption and bactericidal properties. NEW J CHEM 2018. [DOI: 10.1039/c8nj01820k] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The photocatalytic, adsorption and bactericidal properties of vanadium-doped nanosized anatase and η-phase are influenced by their physiochemical parameters.
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Affiliation(s)
- Asiya Gainanova
- Moscow Technological University
- Lomonosov Institute of the Fine Chemical Technology
- Moscow
- Russian Federation
| | - Galina Kuz’micheva
- Moscow Technological University
- Lomonosov Institute of the Fine Chemical Technology
- Moscow
- Russian Federation
| | - Evgeniy Khramov
- National Research Centre “Kurchatov Institute”
- Moscow
- Russian Federation
| | - Ratibor Chumakov
- National Research Centre “Kurchatov Institute”
- Moscow
- Russian Federation
| | - Andrey Zybinskiy
- N. M. Fedorovsky All-Russian Scientific Research Institute of Mineral Resources
- Moscow
- Russian Federation
| | - Nataliya Yashina
- Peoples' Friendship University of Russia
- Moscow
- Russian Federation
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Bachl J, Bertran O, Mayr J, Alemán C, Díaz Díaz D. Aromatic ionene topology and counterion-tuned gelation of acidic aqueous solutions. SOFT MATTER 2017; 13:3031-3041. [PMID: 28374877 DOI: 10.1039/c7sm00234c] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Unusual gelation of acidic solutions was achieved using polycations bearing quaternary ammonium moieties. These ionene polymers are based on a disubstituted phenylene dibenzamide core, which allows the construction of different topomers (i.e. ortho-1, meta-2 and para-3). The topology of the polymers was found to play a key role on their aggregation behaviour both in pure water and in a variety of aqueous acidic solutions leading to the formation of stable acidic gels. Specifically, ortho-1 showed superior gelation ability than the analogues meta-2 and para-3 in numerous solutions of different pH and ionic strengths. Lower critical gelation concentrations, higher gel-to-sol transition temperatures and faster gelation were usually observed for ortho-1 regardless the solvent system. Detailed computational molecular dynamic simulations revealed a major role of the counterion (Cl-) and specific polymerpolymer interactions. In particular, hydrogen bonds, N-Hπ interactions and intramolecular π-π stacking networks are distinctive in ortho-1. In addition, counterions located at internal hydration regions also affect to such polymerpolymer interactions, acting as binders and, therefore, providing additional stability.
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Affiliation(s)
- Jürgen Bachl
- Institut für Organische Chemie, Universität Regensburg, Universitätsstr. 31, 93053 Regensburg, Germany.
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Li Z, Shen J, Ma H, Lu X, Shi M, Li N, Ye M. Preparation and characterization of pH- and temperature-responsive nanocomposite double network hydrogels. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2013; 33:1951-7. [PMID: 23498217 DOI: 10.1016/j.msec.2013.01.004] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2012] [Revised: 12/27/2012] [Accepted: 01/06/2013] [Indexed: 10/27/2022]
Abstract
A methodology is described for the preparation of pH- and temperature-responsive double network (DN) hydrogels with poly(N-isopropylacrylamide) (PNIPAM) as a tightly crosslinked 1st network, polyacrylic acid (PAA) as a loosely crosslinked 2nd network and graphene oxide (GO) as an additive. GO sheets were first prepared via an oxidation reaction and then dispersed in NIPAM aqueous solution via silanization. Free-radical polymerization of NIPAM was carried out at 20 °C in a water bath, and then subjected to UV light, leading to the formation of pH- and temperature-responsive PNIPAM/AA/GO DN hydrogels. The effects of GO sheets and AA contents on various physical properties were investigated. Results show that PNIPAM/AA/GO hydrogels undergo a large volumetric change in response to temperature. It also exhibits significantly fast swelling/deswelling compared with conventional PNIPAM hydrogel. Moreover, the PNIPAM/AA/GO hydrogels have a much better mechanical property than the conventional PNIPAM hydrogels.
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Affiliation(s)
- Zhiqiang Li
- Center of Special Materials and Technology, Fudan University, Shanghai 200433, China
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Yang T, Malkoch M, Hult A. Sequential interpenetrating poly(ethylene glycol) hydrogels prepared by UV-initiated thiol-ene coupling chemistry. ACTA ACUST UNITED AC 2012. [DOI: 10.1002/pola.26393] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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He Y, Tsao HK, Jiang S. Improved Mechanical Properties of Zwitterionic Hydrogels with Hydroxyl Groups. J Phys Chem B 2012; 116:5766-70. [DOI: 10.1021/jp300205m] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yi He
- Department of Chemical Engineering, University of Washington, Seattle, Washington 98195,
United States
| | - Heng-Kwong Tsao
- Department
of Chemical and Materials
Engineering, National Central University, Taoyuan 32001, Taiwan
| | - Shaoyi Jiang
- Department of Chemical Engineering, University of Washington, Seattle, Washington 98195,
United States
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Effect of monomeric sequence on transport properties of d-glucose and ascorbic acid in poly(VP-co-HEMA) hydrogels with various water contents: molecular dynamics simulation approach. Theor Chem Acc 2012. [DOI: 10.1007/s00214-012-1206-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Chang Y, Brunello GF, Fuller J, Hawley M, Kim YS, Disabb-Miller M, Hickner MA, Jang SS, Bae C. Aromatic Ionomers with Highly Acidic Sulfonate Groups: Acidity, Hydration, and Proton Conductivity. Macromolecules 2011. [DOI: 10.1021/ma201759z] [Citation(s) in RCA: 81] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Ying Chang
- Department of Chemistry, University of Nevada Las Vegas, 4505 Maryland Parkway, Box 454003, Las Vegas, Nevada 89154-4003, United States
| | - Giuseppe F. Brunello
- School of Materials Science and Engineering, Georgia Institute of Technology, 771 Ferst Dr., Atlanta, Georgia 30332-0245, United States
| | - Jeffrey Fuller
- School of Materials Science and Engineering, Georgia Institute of Technology, 771 Ferst Dr., Atlanta, Georgia 30332-0245, United States
| | | | | | - Melanie Disabb-Miller
- Department of Materials Science and Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Michael A. Hickner
- Department of Materials Science and Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Seung Soon Jang
- School of Materials Science and Engineering, Georgia Institute of Technology, 771 Ferst Dr., Atlanta, Georgia 30332-0245, United States
| | - Chulsung Bae
- Department of Chemistry, University of Nevada Las Vegas, 4505 Maryland Parkway, Box 454003, Las Vegas, Nevada 89154-4003, United States
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Ohkubo T, Iwadate Y, Kim YS, Henson N, Choe YK. Understanding properties of copoly(arylene ether nitrile)s high-performance polymer electrolyte membranes for fuel cells from molecular dynamics simulations. Theor Chem Acc 2011. [DOI: 10.1007/s00214-011-1056-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Fei X, Xu S, Feng S, Lin J, Lin J, Shi X, Wang J. Mechanically strengthened double network composite hydrogels with high water content: a preliminary study. JOURNAL OF POLYMER RESEARCH 2010. [DOI: 10.1007/s10965-010-9516-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Recent advances in hydrogels in terms of fast stimuli responsiveness and superior mechanical performance. Polym J 2010. [DOI: 10.1038/pj.2010.87] [Citation(s) in RCA: 111] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Seung Geol Lee, Seung Soon Jang, Jongman Kim, Kim G. Distribution and Diffusion of Water in Model Epoxy Molding Compound: Molecular Dynamics Simulation Approach. ACTA ACUST UNITED AC 2010. [DOI: 10.1109/tadvp.2009.2033570] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Chen J, Yi JZ, Zhang LM. Water in dextran hydrogels. J Appl Polym Sci 2010. [DOI: 10.1002/app.32066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Lee SG, Brunello GF, Jang SS, Bucknall DG. Molecular dynamics simulation study of P (VP-co-HEMA) hydrogels: Effect of water content on equilibrium structures and mechanical properties. Biomaterials 2009; 30:6130-41. [DOI: 10.1016/j.biomaterials.2009.07.035] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2009] [Accepted: 07/19/2009] [Indexed: 11/30/2022]
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Lee SG, Brunello GF, Jang SS, Lee JH, Bucknall DG. Effect of Monomeric Sequence on Mechanical Properties of P(VP-co-HEMA) Hydrogels at Low Hydration. J Phys Chem B 2009; 113:6604-12. [DOI: 10.1021/jp8058867] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Seung Geol Lee
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, and School of Polymer, Textile and Fiber Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0295
| | - Giuseppe F. Brunello
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, and School of Polymer, Textile and Fiber Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0295
| | - Seung Soon Jang
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, and School of Polymer, Textile and Fiber Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0295
| | - J. Hannah Lee
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, and School of Polymer, Textile and Fiber Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0295
| | - David G. Bucknall
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, and School of Polymer, Textile and Fiber Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0295
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Lin J, Xu S, Shi X, Feng S, Wang J. Synthesis and properties of a novel double network nanocomposite hydrogel. POLYM ADVAN TECHNOL 2008. [DOI: 10.1002/pat.1322] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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