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For: Takahashi H, Maruyama K, Karino Y, Morita A, Nakano M, Jungwirth P, Matubayasi N. Energetic Origin of Proton Affinity to the Air/Water Interface. J Phys Chem B 2011;115:4745-51. [DOI: 10.1021/jp2015676] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Number Cited by Other Article(s)
1
Garofalini SH, Lentz J. Subpicosecond Molecular Rearrangements Affect Local Electric Fields and Auto-Dissociation in Water. J Phys Chem B 2023;127:3392-3401. [PMID: 37036747 DOI: 10.1021/acs.jpcb.2c06490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2023]
2
Tanaka S, Yamamoto N, Kasahara K, Ishii Y, Matubayasi N. Crystal Growth of Urea and Its Modulation by Additives as Analyzed by All-Atom MD Simulation and Solution Theory. J Phys Chem B 2022;126:5274-5290. [DOI: 10.1021/acs.jpcb.2c01764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
3
Yasoshima N, Ishiyama T, Matubayasi N. Adsorption Energetics of Amino Acid Analogs on Polymer/Water Interfaces Studied by All-Atom Molecular Dynamics Simulation and a Theory of Solutions. J Phys Chem B 2022;126:4389-4400. [PMID: 35653506 DOI: 10.1021/acs.jpcb.2c01297] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
4
Matubayasi N. Solvation energetics of proteins and their aggregates analyzed by all-atom molecular dynamics simulations and the energy-representation theory of solvation. Chem Commun (Camb) 2021;57:9968-9978. [PMID: 34505117 DOI: 10.1039/d1cc03395f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
5
Carpenter AP, Christoffersen EL, Mapile AN, Richmond GL. Assessing the Impact of Solvent Selection on Vibrational Sum-Frequency Scattering Spectroscopy Experiments. J Phys Chem B 2021;125:3216-3229. [PMID: 33739105 DOI: 10.1021/acs.jpcb.1c00188] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
6
Matubayasi N. Energy-Representation Theory of Solutions: Its Formulation and Application to Soft, Molecular Aggregates. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2019. [DOI: 10.1246/bcsj.20190246] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
7
Zhong J, Kumar M, Anglada JM, Martins-Costa MTC, Ruiz-Lopez MF, Zeng XC, Francisco JS. Atmospheric Spectroscopy and Photochemistry at Environmental Water Interfaces. Annu Rev Phys Chem 2019;70:45-69. [PMID: 31174459 DOI: 10.1146/annurev-physchem-042018-052311] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
8
Takahashi H, Kambe H, Morita A. Calculation of solvation free energy utilizing a constrained QM/MM approach combined with a theory of solutions. J Chem Phys 2019;150:114109. [DOI: 10.1063/1.5089199] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
9
Spectroscopic BIL-SFG Invariance Hides the Chaotropic Effect of Protons at the Air-Water Interface. ATMOSPHERE 2018. [DOI: 10.3390/atmos9100396] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
10
Yamamoto N, Nakakuki I, Matubayasi N. Free-energy analysis of physisorption on solid-liquid interface with the solution theory in the energy representation. J Chem Phys 2018;149:014504. [PMID: 29981552 DOI: 10.1063/1.5027861] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
11
Giberti F, Hassanali AA. The excess proton at the air-water interface: The role of instantaneous liquid interfaces. J Chem Phys 2017;146:244703. [DOI: 10.1063/1.4986082] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
12
Takahashi H, Umino S, Miki Y, Ishizuka R, Maeda S, Morita A, Suzuki M, Matubayasi N. Drastic Compensation of Electronic and Solvation Effects on ATP Hydrolysis Revealed through Large-Scale QM/MM Simulations Combined with a Theory of Solutions. J Phys Chem B 2017;121:2279-2287. [PMID: 28222598 DOI: 10.1021/acs.jpcb.7b00637] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
13
Umino S, Takahashi H, Morita A. Condensed phase QM/MM simulations utilizing the exchange core functions to describe exchange repulsions at the QM boundary region. J Chem Phys 2016;145:084107. [DOI: 10.1063/1.4961373] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
14
Takahashi H, Suzuoka D, Morita A. Why is Benzene Soluble in Water? Role of OH/π Interaction in Solvation. J Chem Theory Comput 2016;11:1181-94. [PMID: 26579767 DOI: 10.1021/ct501133u] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
15
Ratkova EL, Palmer DS, Fedorov MV. Solvation thermodynamics of organic molecules by the molecular integral equation theory: approaching chemical accuracy. Chem Rev 2015;115:6312-56. [PMID: 26073187 DOI: 10.1021/cr5000283] [Citation(s) in RCA: 135] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
16
Brorsen KR, Pruitt SR, Gordon MS. Surface Affinity of the Hydronium Ion: The Effective Fragment Potential and Umbrella Sampling. J Phys Chem B 2014;118:14382-7. [DOI: 10.1021/jp506906w] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
17
Levin Y, dos Santos AP. Ions at hydrophobic interfaces. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2014;26:203101. [PMID: 24769502 DOI: 10.1088/0953-8984/26/20/203101] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
18
Baer MD, Kuo IFW, Tobias DJ, Mundy CJ. Toward a unified picture of the water self-ions at the air-water interface: a density functional theory perspective. J Phys Chem B 2014;118:8364-72. [PMID: 24762096 DOI: 10.1021/jp501854h] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
19
Ishiyama T, Imamura T, Morita A. Theoretical Studies of Structures and Vibrational Sum Frequency Generation Spectra at Aqueous Interfaces. Chem Rev 2014;114:8447-70. [DOI: 10.1021/cr4004133] [Citation(s) in RCA: 110] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
20
Hub JS, Wolf MG, Caleman C, van Maaren PJ, Groenhof G, van der Spoel D. Thermodynamics of hydronium and hydroxide surface solvation. Chem Sci 2014. [DOI: 10.1039/c3sc52862f] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
21
Molecular dance: Water’s collective modes. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2013.09.053] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
22
Martins-Costa MTC, Ruiz-Lopez MF. Amino Acid Capture by Aqueous Interfaces. Implications for Biological Uptake. J Phys Chem B 2013;117:12469-74. [DOI: 10.1021/jp4083689] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
23
Lin CH, Ferguson GS, Chaudhury MK. Electrokinetics of polar liquids in contact with nonpolar surfaces. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2013;29:7793-7801. [PMID: 23701297 DOI: 10.1021/la4008813] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
24
Mella M. Exploring unvisited regions to investigate solution properties: The backyard of H3O+ and its aggregates. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2012.10.078] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
25
Sato H. A modern solvation theory: quantum chemistry and statistical chemistry. Phys Chem Chem Phys 2013;15:7450-65. [DOI: 10.1039/c3cp50247c] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
26
Kumar R, Knight C, Voth GA. Exploring the behaviour of the hydrated excess proton at hydrophobic interfaces. Faraday Discuss 2013;167:263-78. [DOI: 10.1039/c3fd00087g] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
27
Semino R, Martí J, Guàrdia E, Laria D. Excess protons in mesoscopic water-acetone nanoclusters. J Chem Phys 2012. [DOI: 10.1063/1.4766201] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
28
Brønsted basicity of the air-water interface. Proc Natl Acad Sci U S A 2012;109:18679-83. [PMID: 23112167 DOI: 10.1073/pnas.1209307109] [Citation(s) in RCA: 131] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
29
Wick CD, Lee AJ, Rick SW. How intermolecular charge transfer influences the air-water interface. J Chem Phys 2012;137:154701. [PMID: 23083178 DOI: 10.1063/1.4758457] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
30
Miller MA, Bonhommeau DA, Heard CJ, Shin Y, Spezia R, Gaigeot MP. Structure and stability of charged clusters. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2012;24:284130. [PMID: 22739093 DOI: 10.1088/0953-8984/24/28/284130] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
31
Collins KD. Why continuum electrostatics theories cannot explain biological structure, polyelectrolytes or ionic strength effects in ion–protein interactions. Biophys Chem 2012;167:43-59. [DOI: 10.1016/j.bpc.2012.04.002] [Citation(s) in RCA: 169] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2011] [Revised: 04/10/2012] [Accepted: 04/10/2012] [Indexed: 01/13/2023]
32
Martins-Costa MTC, Anglada JM, Francisco JS, Ruiz-Lopez MF. Reactivity of Atmospherically Relevant Small Radicals at the Air-Water Interface. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201200656] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
33
Martins-Costa MTC, Anglada JM, Francisco JS, Ruiz-Lopez MF. Reactivity of Atmospherically Relevant Small Radicals at the Air-Water Interface. Angew Chem Int Ed Engl 2012;51:5413-7. [DOI: 10.1002/anie.201200656] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2012] [Revised: 02/20/2012] [Indexed: 11/12/2022]
34
Bukovsky EV, Fiedler SR, Peryshkov DV, Popov AA, Strauss SH. The Structure of (H3O)2B12F12·6H2O - a CCP Lattice of B12F122- Anions Intercalated with a Nonplanar Network of O-H···O Connected O6 Rings. Eur J Inorg Chem 2011. [DOI: 10.1002/ejic.201101118] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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