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Ochmann M, Harich J, Ma R, Freibert A, Kim Y, Gopannagari M, Hong DH, Nam D, Kim S, Kim M, Eom I, Lee JH, Yorke BA, Kim TK, Huse N. UV photochemistry of the L-cystine disulfide bridge in aqueous solution investigated by femtosecond X-ray absorption spectroscopy. Nat Commun 2024; 15:8838. [PMID: 39397016 PMCID: PMC11471820 DOI: 10.1038/s41467-024-52748-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2024] [Accepted: 09/19/2024] [Indexed: 10/15/2024] Open
Abstract
The photolysis of disulfide bonds is implicated in denaturation of proteins exposed to ultraviolet light. Despite this biological relevance in stabilizing the structure of many proteins, the mechanisms of disulfide photolysis are still contested after decades of research. Herein, we report new insight into the photochemistry of L-cystine in aqueous solution by femtosecond X-ray absorption spectroscopy at the sulfur K-edge. We observe homolytic bond cleavage upon ultraviolet irradiation and the formation of thiyl radicals as the single primary photoproduct. Ultrafast thiyl decay due to geminate recombination proceeds at a quantum yield of >80 % within 20 ps. These dynamics coincide with the emergence of a secondary product, attributed to the generation of perthiyl radicals. From these findings, we suggest a mechanism of perthiyl radical generation from a vibrationally excited parent molecule that asymmetrically fragments along a carbon-sulfur bond. Our results point toward a dynamic photostability of the disulfide bridge in condensed-phase.
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Affiliation(s)
- Miguel Ochmann
- Department of Physics, University of Hamburg and Center for Free-Electron Laser Science, Hamburg, Germany
| | - Jessica Harich
- Department of Physics, University of Hamburg and Center for Free-Electron Laser Science, Hamburg, Germany
| | - Rory Ma
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
| | - Antonia Freibert
- Department of Physics, University of Hamburg and Center for Free-Electron Laser Science, Hamburg, Germany.
| | - Yujin Kim
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
| | - Madhusudana Gopannagari
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Da Hye Hong
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Daewoong Nam
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
- Photon Science Center, Pohang University of Science and Technology, Pohang, Republic of Korea
| | - Sangsoo Kim
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
| | - Minseok Kim
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
| | - Intae Eom
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
- Photon Science Center, Pohang University of Science and Technology, Pohang, Republic of Korea
| | - Jae Hyuk Lee
- Pohang Accelerator Laboratory, POSTECH, Pohang, Republic of Korea
- Photon Science Center, Pohang University of Science and Technology, Pohang, Republic of Korea
| | - Briony A Yorke
- School of Chemistry, University of Leeds, Leeds, United Kingdom
| | - Tae Kyu Kim
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.
| | - Nils Huse
- Department of Physics, University of Hamburg and Center for Free-Electron Laser Science, Hamburg, Germany.
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Cao J, Chen DC. Disulfide bond photochemistry: the effects of higher excited states and different molecular geometries on disulfide bond cleavage. Phys Chem Chem Phys 2019; 21:4176-4183. [DOI: 10.1039/c8cp06891g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We have investigated the light-induced cleavage of disulfide bond using MS-CASPT2 based trajectory simulations and provided insights into the intrinsic excited state properties of disulfide molecules.
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Affiliation(s)
- Jun Cao
- School of Materials Science and Energy Engineering
- Foshan University, Foshan
- Guangdong
- P. R. China
- Guizhou Provincial Key Laboratory of Computational Nano-material Science
| | - Dong-Chu Chen
- School of Materials Science and Energy Engineering
- Foshan University, Foshan
- Guangdong
- P. R. China
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Kinetics of the hydrogen abstraction ·C2H5 + alkane → C2H6 + alkyl reaction class: an application of the reaction class transition state theory. Theor Chem Acc 2013. [DOI: 10.1007/s00214-013-1344-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Ratkiewicz A. Kinetics of 1,6-hydrogen migration in alkyl radical reaction class. REACTION KINETICS MECHANISMS AND CATALYSIS 2012. [DOI: 10.1007/s11144-012-0518-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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