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Acke G, Bultinck P. The influence of correlation on (de)localization indices from a valence bond perspective. J Mol Model 2018; 24:275. [PMID: 30191324 DOI: 10.1007/s00894-018-3808-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2018] [Accepted: 08/21/2018] [Indexed: 11/28/2022]
Abstract
When going beyond the Hartree-Fock level to correlated methods, one observes a significant reduction in the delocalization index. This is commonly interpreted as a weakening of electron sharing due to electron correlation, although this is rather counter-intuitive to the concomitant energy lowering. In this study, we use an analytical valence bond model and full CI calculations to show that this reduction in the delocalization index actually goes hand in hand with increased covalent contributions at the expense of ionic contributions. This suggests that we should be careful in formulating interpretations of these results in (de)localization indices. Graphical Abstract Variation of the localization Δ(ΩA, ΩA) and delocalization index Δ(ΩA, ΩB) as a function of the parameter ω. By adjusting this parameter ω from [Formula: see text] to 0, we can gradually change the underlying wave function from a Hartree-Fock to a Heitler-London description.
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Affiliation(s)
- Guillaume Acke
- Department of Chemistry, Ghent University, Krijgslaan 281 (S3), Ghent, 900, Belgium
| | - Patrick Bultinck
- Department of Chemistry, Ghent University, Krijgslaan 281 (S3), Ghent, 900, Belgium.
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2
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Insights from domain-averaged Fermi hole (DAFH) analysis and multicenter bond indices into the nature of Be(0) bonding. Struct Chem 2017. [DOI: 10.1007/s11224-017-0914-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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3
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Witte M, Grimm-Lebsanft B, Goos A, Binder S, Rübhausen M, Bernard M, Neuba A, Gorelsky S, Gerstmann U, Henkel G, Gero Schmidt W, Herres-Pawlis S. Optical response of the Cu2 S2 diamond core in Cu2II(NGuaS)2 Cl2. J Comput Chem 2016; 37:2181-92. [PMID: 27362786 DOI: 10.1002/jcc.24439] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2016] [Revised: 06/10/2016] [Accepted: 06/13/2016] [Indexed: 01/25/2023]
Abstract
Density functional theory (DFT) and time-dependent DFT calculations are presented for the dicopper thiolate complex Cu2 (NGuaS)2 Cl2 [NGuaS=2-(1,1,3,3-tetramethylguanidino) benzenethiolate] with a special focus on the bonding mechanism of the Cu2 S2 Cl2 core and the spectroscopic response. This complex is relevant for the understanding of dicopper redox centers, for example, the CuA center. Its UV/Vis absorption is theoretically studied and found to be similar to other structural CuA models. The spectrum can be roughly divided in the known regions of metal d-d absorptions and metal to ligand charge transfer regions. Nevertheless the chloride ions play an important role as electron donors, with the thiolate groups as electron acceptors. The bonding mechanism is dissected by means of charge decomposition analysis which reveals the large covalency of the Cu2 S2 diamond core mediated between Cu dz2 and S-S π and π* orbitals forming Cu-S σ bonds. Measured resonant Raman spectra are shown for 360- and 720-nm excitation wavelength and interpreted using the calculated vibrational eigenmodes and frequencies. The calculations help to rationalize the varying resonant behavior at different optical excitations. Especially the phenylene rings are only resonant for 720 nm. © 2016 Wiley Periodicals, Inc.
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Affiliation(s)
- Matthias Witte
- Lehrstuhl Für Bioanorganische Chemie, Fachgruppe Chemie, RWTH Aachen University, Landoltweg 1, Aachen, 52074, Germany
| | - Benjamin Grimm-Lebsanft
- Institut für Nanostruktur- und Festkörperphysik and Center for Free Electron Laser Science, University of Hamburg, Luruper Chaussee 149, 22761, Hamburg, Germany
| | - Arne Goos
- Institut für Nanostruktur- und Festkörperphysik and Center for Free Electron Laser Science, University of Hamburg, Luruper Chaussee 149, 22761, Hamburg, Germany
| | - Stephan Binder
- Institut für Nanostruktur- und Festkörperphysik and Center for Free Electron Laser Science, University of Hamburg, Luruper Chaussee 149, 22761, Hamburg, Germany
| | - Michael Rübhausen
- Institut für Nanostruktur- und Festkörperphysik and Center for Free Electron Laser Science, University of Hamburg, Luruper Chaussee 149, 22761, Hamburg, Germany
| | - Martin Bernard
- Lehrstuhl Für Anorganische Chemie, Universität Paderborn, Warburger Str. 100, Paderborn, 33098, Germany
| | - Adam Neuba
- Lehrstuhl Für Anorganische Chemie, Universität Paderborn, Warburger Str. 100, Paderborn, 33098, Germany
| | - Serge Gorelsky
- Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario, K1N 6N5, Canada
| | - Uwe Gerstmann
- Lehrstuhl Für Theoretische Physik, Universität Paderborn, Warburger Str. 100, Paderborn, 33098, Germany
| | - Gerald Henkel
- Lehrstuhl Für Anorganische Chemie, Universität Paderborn, Warburger Str. 100, Paderborn, 33098, Germany
| | - Wolf Gero Schmidt
- Lehrstuhl Für Theoretische Physik, Universität Paderborn, Warburger Str. 100, Paderborn, 33098, Germany
| | - Sonja Herres-Pawlis
- Lehrstuhl Für Bioanorganische Chemie, Fachgruppe Chemie, RWTH Aachen University, Landoltweg 1, Aachen, 52074, Germany
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4
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Gatti C, Orlando AM, Lo Presti L. Insights on spin polarization through the spin density source function. Chem Sci 2015; 6:3845-3852. [PMID: 29218155 PMCID: PMC5707457 DOI: 10.1039/c4sc03988b] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2014] [Accepted: 04/13/2015] [Indexed: 11/22/2022] Open
Abstract
The source function for the spin density s(r) is introduced, allowing the H and O influence on s(r) to be disentangled.
Understanding how spin information is transmitted from paramagnetic to non-magnetic centers is crucial in advanced materials research and calls for novel interpretive tools. Herein, we show that the spin density at a point may be seen as determined by a local source function for such density, operating at all other points of space. Integration of the local source over Bader's quantum atoms measures their contribution in determining the spin polarization at any system's location. Each contribution may be then conveniently decomposed in a magnetic term due to the magnetic natural orbital(s) density and in a reaction or relaxation term due to the remaining orbitals density. A simple test case, 3B1 water, is chosen to exemplify whether an atom or group of atoms concur or oppose the paramagnetic center in determining a given local spin polarization. Discriminating magnetic from reaction or relaxation contributions to such behaviour strongly enhances chemical insight, though care needs to be paid to the large sensitivity of the latter contributions to the level of the computational approach and to the difficulty of singling out the magnetic orbitals in the case of highly correlated systems. Comparison of source function atomic contributions to the spin density with those reconstructing the electron density at a system's position, enlightens how the mechanisms which determine the two densities may in general differ and how diverse may be the role played by each system's atom in determining each of the two densities. These mechanisms reflect the quite diverse portraits of the electron density and electron spin density Laplacians, hence the different local concentration/dilution of the total and (α–β) electron densities throughout the system. Being defined in terms of an observable, the source function for the spin density is also potentially amenable to experimental determination, as customarily performed for its electron density analogue.
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Affiliation(s)
- Carlo Gatti
- CNR-ISTM, Istituto di Scienze e Tecnologie Molecolari , Via Golgi 19 , 20133 Milano , Italy . .,Center for Materials Crystallography , Aarhus University , Langelandsgade 140 , 8000 Aarhus , Denmark
| | - Ahmed M Orlando
- Center for Materials Crystallography , Aarhus University , Langelandsgade 140 , 8000 Aarhus , Denmark.,Dipartimento di Chimica , Università degli Studi di Milano , Via Golgi 19 , 20133 Milano , Italy
| | - Leonardo Lo Presti
- CNR-ISTM, Istituto di Scienze e Tecnologie Molecolari , Via Golgi 19 , 20133 Milano , Italy . .,Center for Materials Crystallography , Aarhus University , Langelandsgade 140 , 8000 Aarhus , Denmark.,Dipartimento di Chimica , Università degli Studi di Milano , Via Golgi 19 , 20133 Milano , Italy
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5
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Yao SA, Martin-Diaconescu V, Infante I, Lancaster KM, Götz AW, DeBeer S, Berry JF. Electronic Structure of Ni2E2 Complexes (E = S, Se, Te) and a Global Analysis of M2E2 Compounds: A Case for Quantized E2n– Oxidation Levels with n = 2, 3, or 4. J Am Chem Soc 2015; 137:4993-5011. [DOI: 10.1021/ja511607j] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Shu A. Yao
- Department
of Chemistry, University of Wisconsin—Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
| | - Vlad Martin-Diaconescu
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470, Mülheim/Ruhr, Germany
| | - Ivan Infante
- Kimika Fakultatea,
Euskal Herriko Unibertsitatea, and Donostia International Physics
Center (DIPC), P. K. 1072, 20080 Donostia, Euskadi, Spain
| | - Kyle M. Lancaster
- Department
of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States
| | - Andreas W. Götz
- San
Diego Supercomputer Center, University of California—San Diego, La
Jolla, California 92093, United States
| | - Serena DeBeer
- Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 34-36, D-45470, Mülheim/Ruhr, Germany
- Department
of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States
| | - John F. Berry
- Department
of Chemistry, University of Wisconsin—Madison, 1101 University Avenue, Madison, Wisconsin 53706, United States
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Ramos-Cordoba E, Postils V, Salvador P. Oxidation States from Wave Function Analysis. J Chem Theory Comput 2015; 11:1501-8. [DOI: 10.1021/ct501088v] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Eloy Ramos-Cordoba
- Institut
de Química
Computacional i Catàlisi (IQCC) i Department de Química, Universitat de Girona, 17071 Girona, Spain
| | - Verònica Postils
- Institut
de Química
Computacional i Catàlisi (IQCC) i Department de Química, Universitat de Girona, 17071 Girona, Spain
| | - Pedro Salvador
- Institut
de Química
Computacional i Catàlisi (IQCC) i Department de Química, Universitat de Girona, 17071 Girona, Spain
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7
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Structure and bonding in binuclear metal carbonyls. Classical paradigms vs. insights from modern theoretical calculations. COMPUT THEOR CHEM 2015. [DOI: 10.1016/j.comptc.2014.07.018] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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8
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Conejeros S, Moreira IDPR, Alemany P, Canadell E. Nature of Holes, Oxidation States, and Hypervalency in Covellite (CuS). Inorg Chem 2014; 53:12402-6. [DOI: 10.1021/ic502436a] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Sergio Conejeros
- Departament
de Química Física and Institut de Química Teórica
i Computacional (IQTCUB), Universitat de Barcelona, Martí
i Franquès 1, 08028 Barcelona, Spain
| | - Ibério de P. R. Moreira
- Departament
de Química Física and Institut de Química Teórica
i Computacional (IQTCUB), Universitat de Barcelona, Martí
i Franquès 1, 08028 Barcelona, Spain
| | - Pere Alemany
- Departament
de Química Física and Institut de Química Teórica
i Computacional (IQTCUB), Universitat de Barcelona, Martí
i Franquès 1, 08028 Barcelona, Spain
| | - Enric Canadell
- Institut
de Ciència de Materials de Barcelona (CSIC), Campus de la UAB, 08193 Bellaterra, Spain
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Vidossich P, Lledós A. The use of localised orbitals for the bonding and mechanistic analysis of organometallic compounds. Dalton Trans 2014; 43:11145-51. [PMID: 24681773 DOI: 10.1039/c4dt00251b] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Through a series of examples we show how, upon orbital localisation, the outcome of an electronic structure calculation reveals features, such as bonding and oxidation states, which are controversial to grasp by alternative methods. The approach can also be applied to the analysis of reaction mechanisms. Because of the insight it provides in a limited execution time, we believe that this approach, known since the early developments of computational quantum chemistry, could find wider applications in the organometallic community than it actually has and facilitate communication between computational and experimental chemists.
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Affiliation(s)
- Pietro Vidossich
- Departament de Química, Universitat Autònoma de Barcelona, 08193, Cerdanyola del Vallès, Spain.
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10
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Ramos-Cordoba E, Salvador P, Mayer I. The atomic orbitals of the topological atom. J Chem Phys 2013; 138:214107. [DOI: 10.1063/1.4807775] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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