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Houston RW, Abdoulmoumine NH. Investigation of the thermal deconstruction of β-β' and 4-O-5 linkages in lignin model oligomers by density functional theory (DFT). RSC Adv 2023; 13:6181-6190. [PMID: 36825296 PMCID: PMC9941757 DOI: 10.1039/d2ra07787f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Accepted: 02/03/2023] [Indexed: 02/23/2023] Open
Abstract
Model compounds that represent important substructures in lignin have popularly been used to gain a better understanding of the behavior of lignin during thermal deconstruction, such as fast pyrolysis. The β-O-4 linkage of lignin has previously been the focus of many model compound studies as it is the most prevalent linkage found in native lignin. In this work, two lesser studied linkages, the β-β' and 4-O-5, were investigated with density functional theory (DFT). Bond dissociation enthalpies (BDEs) were calculated for the relevant bonds along each interunit linkage for two model compounds containing these linkages. Conformational analysis of the first model oligomer has a relative enthalpy difference of 1.55 kcal mol-1. For the β-β' linkage, the alpha carbons had the lowest BDEs of the ring opening reactions due to excessive electron delocalization around the aromatic rings. The bonds of the 4-O-5 linkage had similar BDEs but were appreciably higher than the BDEs for other ether linkages, such as β-O-4 and α-O-4. The higher BDEs of the 4-O-5 bonds is a result of the radical being formed on an aromatic carbon compared to an aliphatic carbon. Our results indicate the ring-opening reactions around the alpha-carbon of the β-β' linkage would be a major reaction point during thermal deconstruction of the chosen oligomers. This work provides valuable information on the thermal deconstruction behavior of two lesser studied interunit linkages that builds on the authors' previous work, on β-O-4, α-O-4, and β-5 linkages, to develop a library of reaction information for various lignin interunit linkages.
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Affiliation(s)
- Ross W. Houston
- Department of Biosystems Engineering and Soil Science, University of Tennessee2506 E. J. Chapman DriveKnoxvilleTN 37996USA
| | - Nourredine H. Abdoulmoumine
- Department of Biosystems Engineering and Soil Science, University of Tennessee2506 E. J. Chapman DriveKnoxvilleTN 37996USA,Center for Renewable Carbon, University of Tennessee2506 Jacob DriveKnoxvilleTN 37996USA
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Ponnuchamy V, Gordobil O, Diaz RH, Sandak A, Sandak J. Fractionation of lignin using organic solvents: A combined experimental and theoretical study. Int J Biol Macromol 2020; 168:792-805. [PMID: 33242547 DOI: 10.1016/j.ijbiomac.2020.11.139] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 11/08/2020] [Accepted: 11/20/2020] [Indexed: 10/22/2022]
Abstract
Refining of industrial lignin to produce homogeneous fractions is essential for high-value applications. However, the understanding of key interactions between a variety of solvents with lignin polymer is still uncertain. In this work, single-step fractionation of industrial hardwood kraft lignin (HKL) using organic solvents of different polarities - ethanol, acetone, diethyl ether and hexane - was investigated by combining an experimental and theoretical approach. Experimental results revealed that higher polarity solvents (ethanol and acetone) exhibited higher solubility yield compared to moderate and low polarity solvents. The chemical differences between lignin fractions were proven by pyrolysis gas chromatography mass spectrometry and near infrared spectroscopy. Density functional theory (DFT) results indicated that ethanol presented higher interaction energy followed by acetone, diethyl ether and hexane, which was consistent with experimental findings. Hydrogen bond and non-covalent interaction results from DFT demonstrated that the predominant interaction was found for high polarity of ethanol over other solvents and γ-OH in the lignin model is the key site.
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Affiliation(s)
- Veerapandian Ponnuchamy
- InnoRenew CoE, Livade 6, 6310 Izola, Slovenia; University of Primorska, Andrej Marušič Institute, Titov trg 4, 6000 Koper, Slovenia.
| | | | - René Herrera Diaz
- InnoRenew CoE, Livade 6, 6310 Izola, Slovenia; Chemical and Environmental Engineering Department, University of the Basque Country, San Sebastian, Spain
| | - Anna Sandak
- InnoRenew CoE, Livade 6, 6310 Izola, Slovenia; University of Primorska, Faculty of Mathematics, Natural Sciences and Information Technologies, Glagoljaška 8, 6000 Koper, Slovenia
| | - Jakub Sandak
- InnoRenew CoE, Livade 6, 6310 Izola, Slovenia; University of Primorska, Andrej Marušič Institute, Titov trg 4, 6000 Koper, Slovenia
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Hudzik JM, Barekati-Goudarzi M, Khachatryan L, Bozzelli JW, Ruckenstein E, Asatryan R. OH-Initiated Reactions of para-Coumaryl Alcohol Relevant to the Lignin Pyrolysis. Part II. Kinetic Analysis. J Phys Chem A 2020; 124:4875-4904. [DOI: 10.1021/acs.jpca.9b11894] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jason M. Hudzik
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | | | - Lavrent Khachatryan
- Department of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | - Joseph W. Bozzelli
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Eli Ruckenstein
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
| | - Rubik Asatryan
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
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Asatryan R, Hudzik JM, Bozzelli JW, Khachatryan L, Ruckenstein E. OH-Initiated Reactions of p-Coumaryl Alcohol Relevant to the Lignin Pyrolysis. Part I. Potential Energy Surface Analysis. J Phys Chem A 2019; 123:2570-2585. [DOI: 10.1021/acs.jpca.9b00185] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Rubik Asatryan
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
| | - Jason M. Hudzik
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Joseph W. Bozzelli
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Lavrent Khachatryan
- Department of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | - Eli Ruckenstein
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
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5
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Kulik HJ. MODELING MECHANOCHEMISTRY FROM FIRST PRINCIPLES. REVIEWS IN COMPUTATIONAL CHEMISTRY 2018. [DOI: 10.1002/9781119518068.ch6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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6
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Monti S, Srifa P, Kumaniaev I, Samec JSM. ReaxFF Simulations of Lignin Fragmentation on a Palladium-Based Heterogeneous Catalyst in Methanol-Water Solution. J Phys Chem Lett 2018; 9:5233-5239. [PMID: 30130109 DOI: 10.1021/acs.jpclett.8b02275] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The interaction of fragments derived from lignin depolymerization with a heterogeneous palladium catalyst in methanol-water solution is studied by means of experimental and theoretical methodologies. Quantum chemistry calculations and molecular dynamics simulations based on the ReaxFF approach are combined effectively to obtain an atomic level characterization of the crucial steps of the adsorption of the molecules on the catalyst, their fragmentation, reactions, and desorption. The main products are identified, and the most important routes to obtain them are explained through extensive computational procedures. The simulation results are in excellent agreement with the experiments and suggest that the mechanisms comprise a fast chemisorption of identified fragments from lignin on the metal interface accompanied by bond breaking, release of some of their hydrogens and oxygens to the support, and eventual desorption depending on the local environment. The strongest connections are those involving the aromatic rings, as confirmed by the binding energies of selected representative structures, estimated at the quantum chemistry level. The satisfactory agreement with the literature, quantum chemistry data, and experiments confirms the reliability of the multilevel computational procedure to study complex reaction mixtures and its potential application in the design of high-performance catalytic devices.
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Affiliation(s)
- Susanna Monti
- CNR-ICCOM , Institute of Chemistry of Organometallic Compounds , via G. Moruzzi 1 , I-56124 Pisa , Italy
| | - Pemikar Srifa
- Department of Organic Chemistry, Arrhenius Laboratory , Stockholm University , S-106 91 Stockholm , Sweden
| | - Ivan Kumaniaev
- Department of Organic Chemistry, Arrhenius Laboratory , Stockholm University , S-106 91 Stockholm , Sweden
| | - Joseph S M Samec
- Department of Organic Chemistry, Arrhenius Laboratory , Stockholm University , S-106 91 Stockholm , Sweden
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Asatryan R, Bennadji H, Bozzelli JW, Ruckenstein E, Khachatryan L. Molecular Products and Fundamentally Based Reaction Pathways in the Gas-Phase Pyrolysis of the Lignin Model Compound p-Coumaryl Alcohol. J Phys Chem A 2017; 121:3352-3371. [PMID: 28406634 DOI: 10.1021/acs.jpca.7b01656] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The fractional pyrolysis of lignin model compound para-coumaryl alcohol (p-CMA) containing a propanoid side chain and a phenolic OH group was studied using the System for Thermal Diagnostic Studies at temperatures from 200 to 900 °C, in order to gain mechanistic insight into the role of large substituents in high-lignin feedstocks pyrolysis. Phenol and its simple derivatives p-cresol, ethyl-, propenyl-, and propyl-phenols were found to be the major products predominantly formed at low pyrolysis temperatures (<500 °C). A cryogenic trapping technique was employed combined with EPR spectroscopy to identify the open-shell intermediates registered at pyrolysis temperatures above 500 °C. These were characterized as radical mixtures primarily consisting of oxygen-linked conjugated radicals. A comprehensive potential energy surface analysis of p-CMA and p-CMA + H atom systems was performed using various DFT protocols to examine the possible role of concerted molecular eliminations and free-radical mechanisms in the formation of major products. Other significant unimolecular concerted reactions along with formation and decomposition of primary radicals are also described and evaluated. The calculations suggest that a set of the chemically activated secondary radical channels is relevant to the low temperature product formation under fractional pyrolysis conditions.
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Affiliation(s)
- Rubik Asatryan
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York , Buffalo, New York 14226, United States
| | - Hayat Bennadji
- Department of Environmental Sciences, Louisiana State University , Baton Rouge, Louisiana 70808, United States
| | - Joseph W Bozzelli
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology , Newark, New Jersey 07102, United States
| | - Eli Ruckenstein
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York , Buffalo, New York 14226, United States
| | - Lavrent Khachatryan
- Department of Chemistry, Louisiana State University , Baton Rouge, Louisiana 70803, United States
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Sánchez-González Á, Martín-Martínez FJ, Dobado JA. The role of weak interactions in lignin polymerization. J Mol Model 2017; 23:80. [DOI: 10.1007/s00894-017-3257-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2016] [Accepted: 01/23/2017] [Indexed: 10/20/2022]
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Mar BD, Kulik HJ. Depolymerization Pathways for Branching Lignin Spirodienone Units Revealed with ab Initio Steered Molecular Dynamics. J Phys Chem A 2017; 121:532-543. [PMID: 28005362 DOI: 10.1021/acs.jpca.6b11414] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Lignocellulosic biomass is an abundant, rich source of aromatic compounds, but direct utilization of raw lignin has been hampered by both the high heterogeneity and variability of linking bonds in this biopolymer. Ab initio steered molecular dynamics (AISMD) has emerged both as a fruitful direct computational screening approach to identify products that occur through mechanical depolymerization (i.e., in sonication or ball-milling) and as a sampling approach. By varying the direction of force and sampling over 750 AISMD trajectories, we identify numerous possible pathways through which lignin depolymerization may occur in pyrolysis or through catalytic depolymerization as well. Here, we present eight unique major depolymerization pathways discovered via AISMD for the recently characterized spirodienone lignin branching linkage that may comprise around 10% weight of all lignin in some softwoods. We extract representative trajectories from AISMD and carry out reaction pathway analysis to identify energetically favorable pathways for lignin depolymerization. Importantly, we identify dynamical effects that could not be observed through more traditional calculations of bond dissociation energies. Such effects include thermodynamically favorable recovery of aromaticity in the dienone ring that leads to near-barrierless subsequent ether cleavage and hydrogen-bonding effects that stabilize newly formed radicals. Some of the most stable spirodienone fragments that reside at most 1 eV above the reactant structure are formed with only 2 eV barriers for C-C bond cleavage, suggesting key targets for catalyst design to drive targeted depolymerization of lignin.
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Affiliation(s)
- Brendan D Mar
- Department of Chemical Engineering, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
| | - Heather J Kulik
- Department of Chemical Engineering, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
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Elder T, Berstis L, Beckham GT, Crowley MF. Coupling and Reactions of 5-Hydroxyconiferyl Alcohol in Lignin Formation. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2016; 64:4742-4750. [PMID: 27236926 DOI: 10.1021/acs.jafc.6b02234] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The catechol alcohols, caffeyl and 5-hydroxyconiferyl alcohol, may be incorporated into lignin either naturally or through genetic manipulation. Due to the presence of o-OH groups, these compounds form benzodioxanes, a departure from the interunit connections found in lignins derived from the cinnamyl alcohols. In nature, lignins composed of caffeyl and 5-hydroxyconiferyl alcohol are linear homopolymers and, as such, may have properties that make them amenable for use in value-added products, such as lignin-based carbon fibers. In the current work, results from density functional theory calculations for the reactions of 5-hydroxyconiferyl alcohol, taking stereochemistry into account, are reported. Dehydrogenation and quinone methide formation are found to be thermodynamically favored for 5-hydroxyconiferyl alcohol, over coniferyl alcohol. The comparative energetics of the rearomatization reactions suggest that the formation of the benzodioxane linkage is under kinetic control. Ring-opening reactions of the benzodioxane groups show that the bond dissociation enthalpy of the α-O cleavage reaction is lower than that of the β-O reaction. The catechol lignins represent a novel form of the polymer that may offer new opportunities for bioproducts and genetic targets.
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Affiliation(s)
- Thomas Elder
- Southern Research Station, USDA-Forest Service , 521 Devall Drive, Auburn, Alabama 36849, United States
| | - Laura Berstis
- National Bioenergy Center, National Renewable Energy Laboratory , 15013 Denver West Parkway, Golden, Colorado 80401, United States
| | - Gregg T Beckham
- National Bioenergy Center, National Renewable Energy Laboratory , 15013 Denver West Parkway, Golden, Colorado 80401, United States
| | - Michael F Crowley
- Biosciences Center, National Renewable Energy Laboratory , 15013 Denver West Parkway, Golden, Colorado 80401, United States
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11
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JIANG XY, LU Q, DONG XC, HU B, DONG CQ. Theoretical study on the effect of the substituent groups on the homolysis of the ether bond in lignin trimer model compounds. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/s1872-5813(16)30017-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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12
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Mar BD, Qi HW, Liu F, Kulik HJ. Ab Initio Screening Approach for the Discovery of Lignin Polymer Breaking Pathways. J Phys Chem A 2015; 119:6551-62. [PMID: 26001164 DOI: 10.1021/acs.jpca.5b03503] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The directed depolymerization of lignin biopolymers is of utmost relevance for the valorization or commercialization of biomass fuels. We present a computational and theoretical screening approach to identify potential cleavage pathways and resulting fragments that are formed during depolymerization of lignin oligomers containing two to six monomers. We have developed a chemical discovery technique to identify the chemically relevant putative fragments in eight known polymeric linkage types of lignin. Obtaining these structures is a crucial precursor to the development of any further kinetic modeling. We have developed this approach by adapting steered molecular dynamics calculations under constant force and varying the points of applied force in the molecule to diversify the screening approach. Key observations include relationships between abundance and breaking frequency, the relative diversity of potential pathways for a given linkage, and the observation that readily cleaved bonds can destabilize adjacent bonds, causing subsequent automatic cleavage.
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Affiliation(s)
| | | | - Fang Liu
- §Department of Chemistry, Stanford University, Stanford, California 94305, United States
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13
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Hayes CJ, Burgess DR, Manion JA. Combustion Pathways of Biofuel Model Compounds. ADVANCES IN PHYSICAL ORGANIC CHEMISTRY 2015. [DOI: 10.1016/bs.apoc.2015.09.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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14
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Beste A. ReaxFF study of the oxidation of lignin model compounds for the most common linkages in softwood in view of carbon fiber production. J Phys Chem A 2014; 118:803-14. [PMID: 24428197 DOI: 10.1021/jp410454q] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Lignin is an underused but major component of biomass. One possible area of utilization is the production of carbon fiber. A necessary processing step is the stabilization of lignin fiber (typically in an oxygen environment) before high temperature treatment. We investigate oxidative, thermal conversion of lignin using computational methods. Dilignol model compounds for the most common (seven) linkages in softwood are chosen to represent the diverse structure of lignin. We perform molecular dynamics simulation where the potential energy surface is described by a reactive force field (ReaxFF). We calculate overall activation energies for model conversion and reveal initial mechanisms of formaldehyde formation. We record fragmentation patterns and average carbon oxidation numbers at various temperatures. Most importantly, we identify mechanisms for stabilizing reactions that result in cyclic and rigid connections in softwood lignin fibers that are necessary for further processing into carbon fibers.
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Affiliation(s)
- Ariana Beste
- Joint Institute for Computational Sciences, The University of Tennessee , Oak Ridge, Tennessee 37831, United States
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Janesko BG. Acid-catalyzed hydrolysis of lignin β-O-4 linkages in ionic liquid solvents: a computational mechanistic study. Phys Chem Chem Phys 2014; 16:5423-33. [DOI: 10.1039/c3cp53836b] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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