Theoretical Study on the Water-Assisted Reaction of NCO with HCHO

The influence of a single water molecule on the reaction of BrO + HO2

The influence of a single water molecule on the BrO + HO2 hydrogen extraction reaction has been explored by taking advantage of CCSD(T)/aug-cc-pVTZ//B3LYP/6-311 +  + G(d,p) method. The reaction in the absence of water have two distinct kinds of H-extraction channels to generate HOBr + O2 (1Δg) and HBr + O3, and the channel of generation of HOBr + O2 (1Δg) dominated the BrO + HO2 reaction. The rate coefficient of the most feasible channel for the BrO + HO2 reaction in the absence of water is estimated to be 1.44 × 10-11 cm3 molecule-1 s-1 at 298.15 K, which is consistent with the experiment. The introduction of water made the reaction more complex, but the products are unchanged. Four distinct channels, beginning with HO2…H2O with BrO, H2O…HO2 with BrO, BrO…H2O with HO2, H2O…BrO with HO2 are researched. The most feasible channels, stemming from H2O…HO2 with BrO, and BrO…H2O with HO2, are much slower than the reaction of BrO + HO2 without water, respectively. Thus, the existence of water molecule takes a negative catalytic role for BrO + HO2 reaction.

Impact of a single water molecule on the atmospheric oxidation of thiophene by hydroperoxyl radical

Water as an important assistant can alter the reactivity of atmospheric species. This project is designed to investigate the impact of a single water molecule on the atmospheric reactions of aromatic compounds that have not been attended to comprehensively. In the first part, the atmospheric oxidation mechanisms of thiophene initiated by hydroperoxyl radical through a multiwell-multichannel potential energy surface were studied to have useful information about the chemistry of the considered reaction. It was verified that for the thiophene plus HO₂ reaction, the addition mechanism is dominant the same as other aromatic compounds. Due to the importance of the subject and the presence of water molecules in the atmosphere with a high concentration that we know as relative humidity, and also the lack of insight into the influence of water on the reactions of aromatic compounds with active atmospheric species, herein, the effect of a single water molecule on the addition pathways of the title reaction is evaluated. In another word, this research explores how water can change the occurrence of reactions of aromatic compounds in the atmosphere. For this, the presence of one water molecule is simulated by higher-level calculations (BD(T) method) through the main interactions with the stationary points of the most probable pathways. The results show that the mechanism of the reaction with water is more complicated than the bare reaction due to the formation of the ring-like structures. Also, water molecule decreases the relative energies of all addition pathways. Moreover, atoms in molecule theory (AIM) along with the kinetic study by the transition state (TST) and the Rice–Ramsperger–Kassel–Marcus (RRKM) theories demonstrate that the overall interactions of a path determine how the rate of that path changes. In this regard, our results establish that the interactions of water with HO₂ (thiophene) in the initial complex 1WHA (1WTA or 1WTB) are stronger (weaker) than the sum of its interactions in transition states. Also, for the water-assisted pathways, the ratio of the partition function of the transition state to the partition functions of the reactants is similar to the respective bare reaction. Therefore, the reaction rates of the bare pathways are more than the water-assisted paths that include the 1WHA complex and are less than the paths that involve the 1WTA and 1WTB complexes.

Main group cyanides: from hydrogen cyanide to cyanido-complexes

Homoleptic cyanide compounds exist of almost all main group elements. While the alkali metals and alkaline earth metals form cyanide salts, the cyanides of the lighter main group elements occur mainly as covalent compounds. This review gives an overview of the status quo of main group element cyanides and cyanido complexes. Information about syntheses are included as well as applications, special substance properties, bond lengths, spectroscopic characteristics and computations. Cyanide chemistry is presented mainly from the field of inorganic chemistry, but aspects of chemical biology and astrophysics are also discussed in relation to cyano compounds.

The effect of (H2O)n (n = 1-3) clusters on the reaction of HONO with HCl: a mechanistic and kinetic study

The reaction between HONO and HCl is a possible pathway for the generation of ClNO, which is prone to photolyze, produce chlorine radicals, and accelerate the oxidation of tropospheric VOCs. Current experimental and theoretical studies have significant differences in rate constants under similar conditions. This study aims to examine the reasons for this difference. In this study, the effects of a single water molecule, water dimer, water trimer, excess HCl and excess HONO on the reaction mechanism of HONO + HCl were studied at the CCSD(T)/aug-cc-pVTZ//M06-2X/6-311+G(2df,2p) level and the rate constants of each reaction channel were calculated. Our results showed that the reaction potential barrier of HONO with HCl was the lowest only when the water dimer was present, and the reaction rate constants were close to the experimental results, and both the cis-HONO⋯(H₂O)₂ + HCl and the trans-HONO⋯(H₂O)₂ + HCl reaction paths are likely to occur. We think that the reason for the inconsistency between experimental and theoretical results is that the water dimer is involved in the reaction in experiments.

The favorable routes for the hydrolysis of CH2OO with (H2O)n (n = 1-4) investigated by global minimum searching combined with quantum chemical methods

The hydrolysis reaction of CH₂OO with water and water clusters is believed to be a dominant sink for the CH₂OO intermediate in the atmosphere. However, the favorable route for the hydrolysis of CH₂OO with water clusters is still unclear. Here global minimum searching using the Tsinghua Global Minimum program has been introduced to find the most stable geometry of the CH₂OO(H₂O)_n (n = 1-4) complex firstly. Then, based on these stable complexes, favorable hydrolysis of CH₂OO with (H₂O)_n (n = 1-4) has been investigated using the quantum chemical method of CCSD(T)-F12a/cc-pVDZ-F12//B3LYP/6-311+G(2d,2p) and canonical variational transition state theory with small curvature tunneling. The calculated results have revealed that, although the contribution of CH₂OO + (H₂O)₂ is the most obvious in the hydrolysis of CH₂OO with (H₂O)_n (n = 1-4), the hydrolysis of CH₂OO with (H₂O)₃ is not negligible in atmospheric gas-phase chemistry as its rate is close to the rate of the CH₂OO + H₂O reaction. The calculated results also show that, in a clean atmosphere, the CH₂OO + (H₂O)_n (n = 1-2) reaction competes well with the CH₂OO + SO₂ reaction at 298 K when the concentrations of (H₂O)_n (n = 1-2) range from 20% relative humidity (RH) to 100% RH, and SO₂ is 2.46 × 10¹¹ molecules per cm³. Meanwhile, when the RH is higher than 40%, it is a new prediction that the CH₂OO + (H₂O)₃ reaction can also compete well with the CH₂OO + SO₂ reaction at 298 K. Besides, Born-Oppenheimer molecular dynamics simulation results show that all the favorable channels of the CH₂OO + (H₂O)_n (n = 1-3) reaction cannot react on a time scale of 100 ps in the NVT simulation. However, the NVE simulation results show that the CH₂OO + (H₂O)₃ reaction can be finished well at 8.5 ps, indicating that the gas phase reaction of CH₂OO + (H₂O)₃ is not negligible in the atmosphere. Overall, the present results have provided a definitive example of how the favorable hydrolysis of important atmospheric species with (H₂O)_n (n = 1-4) takes place, which will stimulate one to consider the favorable hydrolysis of water and water clusters with other Criegee intermediates and other important atmospheric species.

Kinetic instability of sulfurous acid in the presence of ammonia and formic acid

In the present work, we have studied the effect of ammonia and formic acid on the kinetic stability of sulfurous acid using high level ab initio calculations. Our investigation reveals that the decomposition reaction of sulfurous acid becomes barrierless in the presence of both ammonia and formic acid. The half-life of the isolated sulfurous acid is estimated to be ∼20 days at room temperature, which becomes only ∼4.0 × 10^-3 s and ∼7.08 × 10² s in the presence of ammonia and formic acid, respectively. These results indicate that, in the presence of ammonia, the stability of sulfurous acid reduces substantially at room temperature. The temperature dependency of the rate constant values indicates that, in the presence of ammonia and formic acid, the reaction has a negative activation energy, while the uncatalyzed and water catalyzed channels have a positive activation energy. We have also studied the pressure dependency of the catalyzed reaction, which suggests that the ammonia catalyzed channel is most sensitive towards the pressure change, as the values of the bimolecular rate constant (k_bi) for this channel were found to be increased by an order of magnitude on going from 0.1 to 10 atm of pressure. Whereas, for the FA and WM catalyzed channels the changes in k_bi with pressure were negligible.

Reaction pathways and kinetics study on a syngas combustion system: CO + HO2 in an H2O environment

The reaction between CO and HO2 plays a significant role in syngas combustion. In this work, the catalytic effect of single-molecule water on this reaction is theoretically investigated at the CCSD(T)/aug-cc-pV(D,T,Q)Z and CCSD(T)-F12a/jun-cc-pVTZ levels in combination with the M062X/aug-cc-pVTZ level. Firstly, the potential energy surface (PES) of CO + HO2 (water-free) is revisited. The major products CO2 + OH are formed via a cis- or a trans-transition state (TS) channel and the formation of HCO + O2 is minor. In the presence of water, the title reaction has three different pre-reactive complexes (i.e., RC2: COHO2 + H2O, RC3: COH2O + HO2, and RC4: HO2H2O + CO), depending on the initial hydrogen bond formation. Compared to the water-free process, the reaction barriers of the water-assisted process are reduced considerably, due to more stable cyclic TSs and complexes. The rate constants for the bimolecular reaction pathways CO + HO2, RC2, RC3, and RC4 are further calculated using conventional transition state theory (TST) with Eckart asymmetric tunneling correction. For reaction CO + HO2, our calculations are in good agreement with the literature. In addition, the effective rate constants for the water-assisted process decrease by 1-2 orders of magnitude compared to the water-free one at a temperature below 600 K. In particular, the effective rate constants for the water-assisted and water-free processes are 1.55 × 10-28 and 3.86 × 10-26 cm3 molecule-1 s-1 at 300 K, respectively. This implies that the contribution of a single molecule water-assisted process is small and cannot accelerate the title reaction.

Effect of NH3 and HCOOH on the H2O2 + HO → HO2 + H2O reaction in the troposphere: competition between the one-step and stepwise mechanisms

The H₂O₂ + HO → HO₂ + H₂O reaction is an important reservoir for both radicals of HO and HO₂ catalyzing the destruction of O₃. Here, this reaction assisted by NH₃ and HCOOH catalysts was explored using the CCSD(T)-F12a/cc-pVDZ-F12//M06-2X/aug-cc-pVTZ method and canonical variational transition state theory with small curvature tunneling. Two possible sets of mechanisms, (i) one-step routes and (ii) stepwise processes, are possible. Our results show that in the presence of both NH₃ and HCOOH catalysts under relevant atmospheric temperature, mechanism (i) is favored both energetically and kinetically than the corresponding mechanism (ii). At 298 K, the relative rate for mechanism (i) in the presence of NH₃ (10, 2900 ppbv) and HCOOH (10 ppbv) is respectively 3–5 and 2–4 orders of magnitude lower than that of the water-catalyzed reaction. This is due to a comparatively lower concentration of NH₃ and HCOOH than H₂O which indicates the positive water effect under atmospheric conditions. Although NH₃ and HCOOH catalysts play a negligible role in the reservoir for both radicals of HO and HO₂ catalyzing the destruction of O₃, the current study provides a comprehensive example of how acidic and basic catalysts assisted the gas-phase reactions.

The H₂O₂ + HO → HO₂ + H₂O reaction is an important reservoir for both radicals of HO and HO₂ catalyzing the destruction of O₃.

Atmospheric chemistry of the self-reaction of HO2 radicals: stepwise mechanism versus one-step process in the presence of (H2O)n (n = 1-3) clusters

The effects of water on radical-radical reactions are of great importance for the elucidation of the atmospheric oxidation process of free radicals. In the present work, the HO2 + HO2 reactions with (H2O)n (n = 1-3) have been investigated using quantum chemical methods and canonical variational transition state theory with small curvature tunneling. We have explored both one-step and stepwise mechanisms, in particular the stepwise mechanism initiated by ring enlargement. The calculated results have revealed that the stepwise mechanism is the dominant one in the HO2 + HO2 reaction that is catalyzed by one water molecule. This is because its pseudo-first-order rate constant (kRWM1') is 3 orders of magnitude larger than that of the corresponding one-step mechanism. Additionally, the value of kRWM1' at 298 K has been found to be 4.3 times larger than that of the rate constant of the HO2 + HO2 reaction (kR1) without catalysts, which is in good agreement with the experimental findings. The calculated results also showed that the stepwise mechanism is still dominant in the (H2O)2 catalyzed reaction due to its higher pseudo-first-order rate constant, which is 3 orders of magnitude larger than that of the corresponding one-step mechanism. On the other hand, the one-step process is much faster than the stepwise mechanism by a factor of 105-106 in the (H2O)3 catalyzed reaction. However, the pseudo-first-order rate constants for the (H2O)2 and (H2O)3-catalyzed reactions are lower than that of the H2O-catalyzed reaction by 3-4 orders of magnitude, which indicates that the water monomer is the most efficient one among all the catalysts of (H2O)n (n = 1-3). The present results have provided a definitive example that water and water clusters have important influences on atmospheric reactions.

A single water molecule accelerating the atmospheric reaction of HONO with ClO

The role of a single water molecule on the atmospheric reaction of HONO + ClO is systematically investigated employing quantum chemical calculation combined with harmonic transition state theory. Two reaction pathways, cis-HONO + ClO and trans-HONO + ClO, are identified for the naked reaction, which depends on the configurations of HONO. When adding a single water molecule to this reaction, the rate constants of cis-HONO + ClO and trans-HONO + ClO pathways are 7.97 × 10^-21 and 2.29 × 10^-17 cm³ molecule^-1 s^-1, respectively, larger than the corresponding naked reaction. To further understand the role of water on the HONO + ClO reaction, it is necessary to calculate the effective rate constant by considering the concentration of water. It shows that the effective rate constants of water-assisted cis-HONO + ClO pathway are much smaller than those of the naked reaction, whereas the presence of water accelerates the trans-HONO + ClO at room temperature. This study demonstrates that water has a positive role in the pathway of trans-HONO + ClO by modifying the stabilities of reactant complexes and transition states through the hydrogen bond formation, which contributes to the sink of atmospheric HONO. In addition, the kinetic branching ratio indicates that the favorable reaction is the trans-HONO + ClO instead of the cis-HONO + ClO pathway, in contrast to the naked reaction. These results reveal the importance of water in the evaluation of the fate of active species in the atmosphere. Graphical Abstract.

Role of (H2O) n (n = 1-2) in the Gas-Phase Reaction of Ethanol with Hydroxyl Radical: Mechanism, Kinetics, and Products

The effect of water on the hydrogen abstraction mechanism and product branching ratio of CH₃CH₂OH + ^•OH reaction has been investigated at the CCSD(T)/aug-cc-pVTZ//BH&HLYP/aug-cc-pVTZ level of theory, coupled with the reaction kinetics calculations, implying the harmonic transition-state theory. Depending on the hydrogen sites in CH₃CH₂OH, the bared reaction proceeds through three elementary paths, producing CH₂CH₂OH, CH₃CH₂O, and CH₃CHOH and releasing a water molecule. Thermodynamic and kinetic results indicate that the formation of CH₃CHOH is favored over the temperature range of 216.7-425.0 K. With the inclusion of water, the reaction becomes quite complex, yielding five paths initiated by three channels. The products do not change compared with the bared reaction, but the preference for forming CH₃CHOH drops by up to 2%. In the absence of water, the room temperature rate coefficients for the formation of CH₂CH₂OH, CH₃CH₂O, and CH₃CHOH are computed to be 5.2 × 10^-13, 8.6 × 10^-14, and 9.0 × 10^-11 cm³ molecule^-1 s^-1, respectively. The effective rate coefficients of corresponding monohydrated and dihydrated reactions are 3-5 and 6-8 orders of magnitude lower than those of the unhydrated reaction, indicating that water has a decelerating effect on the studied reaction. Overall, the characterized effects of water on the thermodynamics, kinetics, and products of the CH₃CH₂OH + ^•OH reaction will facilitate the understanding of the fate of ethanol and secondary pollutants derived from it.

The Role of (H₂O)1-2 in the CH₂O + ClO Gas-Phase Reaction

Mechanism and kinetic studies have been carried out to investigate whether one and two water molecules could play a possible catalytic role on the CH₂O + ClO reaction. Density functional theory combined with the coupled cluster theory were employed to explore the potential energy surface and the thermodynamics of this radical-molecule reaction. The reaction proceeded through four different paths without water and eleven paths with water, producing H + HCO(O)Cl, Cl + HC(O)OH, HCOO + HCl, and HCO + HOCl. Results indicate that the formation of HCO + HOCl is predominant both in the water-free and water-involved cases. In the absence of water, all the reaction paths proceed through the formation of a transition state, while for some reactions in the presence of water, the products were directly formed via barrierless hydrogen transfer. The rate constant for the formation of HCO + HOCl without water is 2.6 × 10-16 cm³ molecule-1 s-1 at 298.15 K. This rate constant is decreased by 9-12 orders of magnitude in the presence of water. The current calculations hence demonstrate that the CH₂O + ClO reaction is impeded by water.

Role of water on the H-abstraction from methanol by ClO

The influence of a single water molecule on the reaction mechanism and kinetics of hydrogen abstraction from methanol (CH₃OH) by the ClO radical has been investigated using ab initio calculations. The reaction proceeds through two channels: abstraction of the hydroxyl H-atom and methyl H-atom of CH₃OH by ClO, leading to the formation of CH₃O+HOCl (+H₂O) and CH₂OH+HOCl (+H₂O), respectively. In both cases, pre- and post-reactive complexes were located at the entrance and exit channel on the potential energy surfaces. Results indicate that the formation of CH₂OH+HOCl (+H₂O) is predominant over the formation of CH₃O+HOCl (+H₂O), with ambient rate constants of 3.07×10^-19 and 3.01×10^-23cm³/(molecule·sec), respectively, for the reaction without water. Over the temperature range 216.7-298.2K, the presence of water is seen to effectively lower the rate constants for the most favorable pathways by 4-6 orders of magnitude in both cases. It is therefore concluded that water plays an inhibitive role on the CH₃OH+ClO reaction under tropospheric conditions.

B, Lin KC. Catalytic effect of a single water molecule on the OH + CH2NH reaction

Effect of water molecule on atmospheric oxidation of imines.

Exploring the role of a single water molecule in the tropospheric reaction of glycolaldehyde with an OH radical: a mechanistic and kinetics study

This work reveals that though a single-water molecule decelerates the atmospheric reaction between the glycolaldehyde and OH radical, however, it facilitates the cis–​trans interconversion along the hydrogen-abstraction pathways.

Hydrolysis of Sulfur Dioxide in Small Clusters of Sulfuric Acid: Mechanistic and Kinetic Study

The deposition and hydrolysis reaction of SO2 + H2O in small clusters of sulfuric acid and water are studied by theoretical calculations of the molecular clusters SO2-(H2SO4)n-(H2O)m (m = 1,2; n = 1,2). Sulfuric acid exhibits a dramatic catalytic effect on the hydrolysis reaction of SO2 as it lowers the energy barrier by over 20 kcal/mol. The reaction with monohydrated sulfuric acid (SO2 + H2O + H2SO4 - H2O) has the lowest energy barrier of 3.83 kcal/mol, in which the cluster H2SO4-(H2O)2 forms initially at the entrance channel. The energy barriers for the three hydrolysis reactions are in the order SO2 + (H2SO4)-H2O > SO2 + (H2SO4)2-H2O > SO2 + H2SO4-H2O. Furthermore, sulfurous acid is more strongly bonded to the hydrated sulfuric acid (or dimer) clusters than the corresponding reactant (monohydrated SO2). Consequently, sulfuric acid promotes the hydrolysis of SO2 both kinetically and thermodynamically. Kinetics simulations have been performed to study the importance of these reactions in the reduction of atmospheric SO2. The results will give a new insight on how the pre-existing aerosols catalyze the hydrolysis of SO2, leading to the formation and growth of new particles.

New insights in atmospheric acid-catalyzed gas phase hydrolysis of formaldehyde: a theoretical study

A two-step mechanism of the gas phase hydrolysis of formaldehyde catalyzed by nitric acid.

Can a single water molecule really affect the HO2 + NO2 hydrogen abstraction reaction under tropospheric conditions?

During the HO₂ + NO₂ reaction, hydrogen abstraction by a single water molecule not only changes the branching ratio of HONO and HNO₂ formation, but also introduces different features with respect to the naked reaction, acting as a reactant that leads to the production of HNO₃.