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1
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Mei Y, Yu J, Chen Z, Su NQ, Yang W. LibSC: Library for Scaling Correction Methods in Density Functional Theory. J Chem Theory Comput 2022; 18:840-850. [DOI: 10.1021/acs.jctc.1c01058] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yuncai Mei
- Department of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Jincheng Yu
- Department of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Zehua Chen
- Department of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Neil Qiang Su
- Department of Chemistry, Duke University, Durham, North Carolina 27708, United States
| | - Weitao Yang
- Department of Chemistry, Duke University, Durham, North Carolina 27708, United States
- Department of Physics, Duke University, Durham, North Carolina 27708, United States
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2
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Zhu T, de Silva P, Van Voorhis T. Implementation of the Many-Pair Expansion for Systematically Improving Density Functional Calculations of Molecules. J Chem Theory Comput 2019; 15:1089-1101. [DOI: 10.1021/acs.jctc.8b01127] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tianyu Zhu
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Piotr de Silva
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Troy Van Voorhis
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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3
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Chen J, Su NQ, Xu X, Zhang DH. Accurate potential energy surfaces for hydrogen abstraction reactions: A benchmark study on the XYG3 doubly hybrid density functional. J Comput Chem 2017; 38:2326-2334. [PMID: 28786211 DOI: 10.1002/jcc.24886] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Revised: 06/27/2017] [Accepted: 06/29/2017] [Indexed: 11/06/2022]
Abstract
The potential energy surface (PES) for the H + CH4 system has been constructed with the recently developed XYG3 doubly hybrid functional, while those with the standard B3LYP hybrid functional, and the Møller-Plesset perturbation theory up to the second order (MP2) are also presented for comparison. Quantum dynamics studies demonstrated that satisfactory results on the reaction probabilities and the rate coefficients can be obtained on top of the XYG3-PES, as compared to the results based on the highly accurate, yet expensive, CCSD(T)-PES (Li et al., J. Chem. Phys. 2015, 142, 204302). Further investigation suggested that the XYG3 functional is useful in providing accurate rate coefficients for some larger systems involving H atom abstractions. © 2017 Wiley Periodicals, Inc.
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Affiliation(s)
- Jun Chen
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, China
| | - Neil Qiang Su
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University, Shanghai, 200433, China
| | - Xin Xu
- Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University, Shanghai, 200433, China
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics & Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China
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4
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Affiliation(s)
- Neil Qiang Su
- Collaborative Innovation Center of Chemistry for Energy Materials, Fudan University, Shanghai 200433, China
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
- MOE Key Laboratory of Computational Physical Sciences, Fudan University, Shanghai 200433, China
- Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Xin Xu
- Collaborative Innovation Center of Chemistry for Energy Materials, Fudan University, Shanghai 200433, China
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China
- MOE Key Laboratory of Computational Physical Sciences, Fudan University, Shanghai 200433, China
- Department of Chemistry, Fudan University, Shanghai 200433, China
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5
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Wasserman A, Nafziger J, Jiang K, Kim MC, Sim E, Burke K. The Importance of Being Inconsistent. Annu Rev Phys Chem 2017; 68:555-581. [PMID: 28463652 DOI: 10.1146/annurev-physchem-052516-044957] [Citation(s) in RCA: 74] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Adam Wasserman
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
- Department of Physics and Astronomy, Purdue University, West Lafayette, Indiana 47907
| | - Jonathan Nafziger
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907
| | - Kaili Jiang
- Department of Physics and Astronomy, Purdue University, West Lafayette, Indiana 47907
| | - Min-Cheol Kim
- Department of Chemistry, Yonsei University, Seoul 03722, South Korea
| | - Eunji Sim
- Department of Chemistry, Yonsei University, Seoul 03722, South Korea
| | - Kieron Burke
- Department of Chemistry, University of California, Irvine, California 92697
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6
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Su NQ, Xu X. The XYG3 type of doubly hybrid density functionals. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2016. [DOI: 10.1002/wcms.1274] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Neil Qiang Su
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Key Laboratory of Computational Physical Sciences, Department of Chemistry; Fudan University; Shanghai 200433 China
| | - Xin Xu
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Key Laboratory of Computational Physical Sciences, Department of Chemistry; Fudan University; Shanghai 200433 China
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7
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Su NQ, Xu X. Second-Order Perturbation Theory for Fractional Occupation Systems: Applications to Ionization Potential and Electron Affinity Calculations. J Chem Theory Comput 2016; 12:2285-97. [DOI: 10.1021/acs.jctc.6b00197] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Neil Qiang Su
- Collaborative Innovation
Center of Chemistry for Energy Materials, Shanghai Key Laboratory
of Molecular Catalysis and Innovative Materials, MOE Laboratory for
Computational Physical Science, Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Xin Xu
- Collaborative Innovation
Center of Chemistry for Energy Materials, Shanghai Key Laboratory
of Molecular Catalysis and Innovative Materials, MOE Laboratory for
Computational Physical Science, Department of Chemistry, Fudan University, Shanghai 200433, China
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8
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Zhou Y, Wu J, Xu X. Improving B3LYP heats of formation with three-dimensional molecular descriptors. J Comput Chem 2016; 37:1175-90. [DOI: 10.1002/jcc.24308] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Revised: 12/27/2015] [Accepted: 12/29/2015] [Indexed: 11/09/2022]
Affiliation(s)
- Yuwei Zhou
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University; Shanghai 200433 China
| | - Jianming Wu
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University; Shanghai 200433 China
| | - Xin Xu
- Collaborative Innovation Center of Chemistry for Energy Materials, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University; Shanghai 200433 China
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9
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10
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Su NQ, Xu X. A comparative study of the xDH-PBE0 and DSD-PBEPBE-D3BJ doubly hybrid density functionals. Mol Phys 2015. [DOI: 10.1080/00268976.2015.1129462] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Neil Qiang Su
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, Fudan University, Shanghai, China
| | - Xin Xu
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Collaborative Innovation Center of Chemistry for Energy Materials, Department of Chemistry, Fudan University, Shanghai, China
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11
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Zhang IY, Su NQ, Brémond ÉAG, Adamo C, Xu X. Response to “Comment on ‘Doubly hybrid density functional xDH-PBE0 from a parameter-free global hybrid model PBE0”’ [J. Chem. Phys. 143, 187101 (2015)]. J Chem Phys 2015. [DOI: 10.1063/1.4934820] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Igor Ying Zhang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Neil Qiang Su
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Éric A. G. Brémond
- Laboratoire d’Électrochimie, Chimie des Interfaces et Modélisation pour l’Énergie, CNRS UMR-7575, École Nationale Supérieure de Chimie de Paris, Chimie ParisTech, 11 rue P. et M. Curie, F-75231 Paris, France
| | - Carlo Adamo
- Laboratoire d’Électrochimie, Chimie des Interfaces et Modélisation pour l’Énergie, CNRS UMR-7575, École Nationale Supérieure de Chimie de Paris, Chimie ParisTech, 11 rue P. et M. Curie, F-75231 Paris, France
- Institut Universitaire de France, 103 Boulevard Saint Michel, F-75005 Paris, France
| | - Xin Xu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, MOE Laboratory for Computational Physical Science, Department of Chemistry, Fudan University, Shanghai 200433, China
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12
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Scaling correction approaches for reducing delocalization error in density functional approximations. Sci China Chem 2015. [DOI: 10.1007/s11426-015-5501-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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13
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Wykes M, Pérez-Jiménez AJ, Adamo C, Sancho-García JC. The diene isomerization energies dataset: A difficult test for double-hybrid density functionals? J Chem Phys 2015; 142:224105. [DOI: 10.1063/1.4922058] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- M. Wykes
- Madrid Institute for Advanced Studies, IMDEA Nanoscience, Calle Faraday 9, Campus Cantoblanco, E-28049 Madrid, Spain
| | - A. J. Pérez-Jiménez
- Departamento de Química Física, Universidad de Alicante, E-03080 Alicante, Spain
| | - C. Adamo
- Institut de Recherche de Chimie Paris (IRCP), CNRS UMR-8247, Chimie ParisTech, École Nationale Superieure de Chimie de Paris, 11 rue P. et M. Curie, F-75231 Paris Cedex 05, France
- Institut Universitaire de France, 103 Boulevard Saint Michel, F-75005 Paris, France
- Istituto Italiano di Tecnologia, CompuNet, I-16163 Genova, Italy
| | - J. C. Sancho-García
- Departamento de Química Física, Universidad de Alicante, E-03080 Alicante, Spain
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