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Rajapaksha H, Mason SE, Forbes TZ. Synthesis, Characterization, and Density Functional Theory Investigation of the Solid-State [UO 2Cl 4(H 2O)] 2- Complex. Inorg Chem 2023; 62:14318-14325. [PMID: 37610833 PMCID: PMC10481372 DOI: 10.1021/acs.inorgchem.3c01725] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Indexed: 08/25/2023]
Abstract
A significant number of solid-state [UO2Cl4]2- coordination compounds have been synthesized and structurally characterized. Yet, despite their purposive relative abundance in aqueous solutions, characterization of aquachlorouranium(VI) complexes remain rare. In the current study, a solid-state uranyl aqua chloro complex ((C4H12N2)2[UO2Cl4(H2O)]Cl2) was synthesized using piperazinium as a charge-balancing ligand, and the structure was determined using single-crystal X-ray diffraction. Using periodic density functional theory, the electronic structure of the [UO2Cl4(H2O)]2- complex was compared to [UO2Cl4]2- to uncover the strengthening of the U═O bond in [UO2Cl4(H2O)]2-. Changes in the strength of the U═O bond were validated further with Raman and IR spectroscopy, where uranyl symmetrical (ν1) and asymmetrical (ν3) stretches were blue-shifted compared to the reference [UO2Cl4]2- complex. Furthermore, the formation energy of the solid-state (C4H12N2)2[UO2Cl4(H2O)]Cl2 complex was calculated to be -287.60 ± 1.75 kJ mol-1 using isothermal acid calorimetry. The demonstrated higher stability relative to the related [UO2Cl4]2- complex was related to the relative stoichiometry of the counterions.
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Affiliation(s)
- Harindu Rajapaksha
- Department
of Chemistry, University of Iowa, Iowa City, Iowa 52242, United States
| | - Sara E. Mason
- Department
of Chemistry, University of Iowa, Iowa City, Iowa 52242, United States
- Center
for Functional Nanomaterials, Brookhaven
National Laboratory, Upton, New York 11973, United States
| | - Tori Z. Forbes
- Department
of Chemistry, University of Iowa, Iowa City, Iowa 52242, United States
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2
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Kalintsev A, Guan Q, Brugger J, Migdisov A, Etschmann B, Ram R, Liu W, Mei Y, Testemale D, Xu H. Nature and coordination geometry of geologically relevant aqueous Uranium(VI) complexes up to 400 ºC: A review and new data. JOURNAL OF HAZARDOUS MATERIALS 2023; 452:131309. [PMID: 37018892 DOI: 10.1016/j.jhazmat.2023.131309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2023] [Revised: 03/23/2023] [Accepted: 03/26/2023] [Indexed: 06/19/2023]
Abstract
The structure of the uranyl aqua ion (UO22+) and a number of its inorganic complexes (specifically, UO2Cl+, UO2Cl20, UO2SO40, [Formula: see text] , [Formula: see text] and UO2OH42-) have been characterised using X-Ray absorption spectroscopy/extended X-Ray absorption fine structure (XAS/EXAFS) at temperatures ranging from 25 to 326 ºC. Results of ab initio molecular dynamics (MD) calculations are also reported for uranyl in chloride and sulfate-bearing fluids from 25 to 400 ºC and 600 bar to 20 kilobar (kb). These results are reported alongside a comprehensive review of prior structural characterisation work with particular focus given to EXAFS works to provide a consistent and up-to-date view of the structure of these complexes under conditions relevant to U mobility in ore-forming systems and around high-grade nuclear waste repositories. Regarding reported EXAFS results, average equatorial coordination was found to decrease in uranyl and its sulfate and chloride complexes as temperature rose - the extent of this decrease differed between species and solution compositions but typically resulted in an equatorial coordination number of ∼3-4 at temperatures above 200 ºC. The [Formula: see text] complex was observed at temperatures from 25 to 247 ºC and exhibited no major structural changes over this temperature range. UO2OH42- exhibited only minor structural changes over a temperature range from 88 to 326 ºC and was suggested to manifest fivefold coordination with four hydroxyl molecules and one water molecule around its equator. Average coordination values derived from fits of the reported EXAFS data were compared to average coordination values calculated using the experimentally derived thermodynamic data for chloride complexes reported by Dargent et al. (2013) and Migdisov et al. (2018b), and for sulfate complexes reported by Alcorn et al. (2019) and Kalintsev et al. (2019). Sulfate EXAFS data were well described by available thermodynamic data, and chloride EXAFS data were described well by the thermodynamic data of Migdisov et al. (2018b), but not by the data of Dargent et al. (2013). The ab initio molecular dynamics calculations confirmed the trends in equatorial coordination observed with EXAFS and were also able to provide an insight into the effect of pressure in equatorial water coordination - for a given temperature, higher pressures appear to lead to a greater number of equatorially bound waters counteracting the temperature effect.
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Affiliation(s)
- Alexander Kalintsev
- School of Earth, Atmosphere and Environment, Monash University, 9 Rainforest Walk, VIC 3800, Australia; Los Alamos National Laboratory, Earth & Environmental Division, Los Alamos, NM, USA.
| | - Qiushi Guan
- CSIRO Mineral Resources, Kensington, WA 6151, Australia
| | - Joël Brugger
- School of Earth, Atmosphere and Environment, Monash University, 9 Rainforest Walk, VIC 3800, Australia
| | - Artas Migdisov
- Los Alamos National Laboratory, Earth & Environmental Division, Los Alamos, NM, USA
| | - Barbara Etschmann
- School of Earth, Atmosphere and Environment, Monash University, 9 Rainforest Walk, VIC 3800, Australia
| | - Rahul Ram
- School of Earth, Atmosphere and Environment, Monash University, 9 Rainforest Walk, VIC 3800, Australia
| | - Weihua Liu
- CSIRO Mineral Resources, Kensington, WA 6151, Australia
| | - Yuan Mei
- CSIRO Mineral Resources, Kensington, WA 6151, Australia
| | - Denis Testemale
- CNRS, Université Grenoble Alpes, Institut NEEL, Grenoble F-38000, France
| | - Hongwu Xu
- Los Alamos National Laboratory, Earth & Environmental Division, Los Alamos, NM, USA
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3
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Yang JJ, Zhao Z, Su J. Theoretical Study of the Excited States and Luminescent Properties of (H 2O) nUO 2Cl 2 ( n = 1-3). Inorg Chem 2023; 62:1978-1987. [PMID: 36690448 DOI: 10.1021/acs.inorgchem.2c03249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The low-lying excited-state properties of the water-solvated UO2Cl2 complexes, i.e., (H2O)nUO2Cl2 (n = 1-3), below 33,000 cm-1, are investigated based on the ab initio NEVPT2 and CCSD(T) with inclusion of scalar relativistic and spin-orbit coupling effects. The simulated luminescence spectral curves agree well with the experimental spectrum in aqueous solution at -120 °C. Water coordination is found to significantly affect the character of luminescent state, which is changed from the 3Φg state in UO2Cl2 to the 3Δg state in (H2O)2,3UO2Cl2. This is distinctly different from the observed unchanged nature of luminescent state in the cases of Ar coordination to UO2Cl2 and H2O coordination to UO2F2 in the previous work. Furthermore, by combining with the theoretical results for the solvated UO2F2 system, the reason why water coordination does not remarkably change the spectral shape of UO2Cl2, as opposed to UO2F2, was explained based on the analysis of two key spectral parameters, O-U-O symmetrical vibrational frequency and U-O bond length elongation. The roles of ligand field and spin-orbit coupling in the determination of luminescent state character and spectral shape in uranyl dihalide complexes are deeply discussed and summarized. These results deepen our understanding of the luminescent properties of uranyl complexes in aqueous solution.
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Affiliation(s)
- Jia-Jia Yang
- College of Chemistry, Sichuan University, Chengdu 610064, China
| | - Zhen Zhao
- College of Chemistry, Sichuan University, Chengdu 610064, China
| | - Jing Su
- College of Chemistry, Sichuan University, Chengdu 610064, China
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4
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Zhang N, Tang J, Luo Q, Wang S, Zeng D. Computational and solubility equilibrium experimental insight into Ca 2+-fluoride complexation and their dissociation behaviors in aqueous solutions: implication for the association constant measured using fluoride ion selective electrodes. Phys Chem Chem Phys 2021; 23:24711-24725. [PMID: 34709252 DOI: 10.1039/d1cp02087k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Although the Ca2+-F- association is of great importance for aqueous environments and industrial systems containing F-, as well as for defluorination processes, many details of the association solvation structures and behavior remain unclear. Herein, a combination of classical/ab initio molecular dynamics simulations and density functional theory calculations was used to investigate the structure and hydration of CaFx2-x (x = 1, 2) and the association/dissociation behavior of Ca2+-F- in aqueous CaF2 solutions. The primary shell of Ca2+ is found to be very flexible in the association of Ca2+-F-, with coordination numbers dynamically oscillating in the range of 6-9, with 6 and 7 being the most favorable. The calculations show that for CaF(H2O)14+, the contact ion pair (CIP) is more favorable and occurs with no energy barrier, whereas the formation of CaF2(aq.) must overcome a ∼3.6 kJ mol-1 energy barrier; moreover, the CIP and solvent shared ion pair (SSIP) dynamically coexist for CaF2(H2O)14 in aqueous CaF2 solutions. Calculations for the dissociation process of CaF(H2O)6+ show a dramatic energy increase going from SSIP to free Ca2+ and F-, ascribed to the surprisingly long-range electrostatic attraction between Ca2+ and F- rather than to special F⋯H interactions. The energy increase results in the estimated association constant of CaF+ being larger than that previously measured using fluoride ion selective electrodes. This is attributed to the fact that the latter value might correspond to the ligand reaction of free Ca2+ and F- to form the Ca2+-F- SSIP. The combination of these results with CaF2(s) solubility measurements suggests that the higher-order Ca2+-F- complexes are absent in aqueous CaF2 solutions.
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Affiliation(s)
- Ning Zhang
- College of Science, Central South University of Forestry and Technology, Changsha 410004, Hunan, P. R. China.
| | - Jianfeng Tang
- College of Science, Central South University of Forestry and Technology, Changsha 410004, Hunan, P. R. China.
| | - Qiongqiong Luo
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, Hunan, P. R. China
| | - Shaoheng Wang
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, Hunan, P. R. China
| | - Dewen Zeng
- College of Chemistry and Chemical Engineering, Central South University, Changsha 410083, Hunan, P. R. China
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5
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Raymond O, Bühl M, Lane JR, Henderson W, Brothers PJ, Plieger PG. Ab Initio Molecular Dynamics Investigation of Beryllium Complexes. Inorg Chem 2020; 59:2413-2425. [PMID: 32017540 DOI: 10.1021/acs.inorgchem.9b03309] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Structures of aqueous [Be(H2O)4]2+, its outer-sphere and inner-sphere complexes with F-, Cl-, and SO42-, and dinuclear complexes with a [Be2(κ-OH)(κ-SO4)]+ core have been studied through Car-Parrinello molecular dynamics (CPMD) simulations with the BLYP functional. According to constrained CPMD/BLYP simulations and pointwise thermodynamic integration, the free energy of deprotonation of [Be(H2O)4]2+ and its binding free energy with F- are 9.6 and -6.2 kcal/mol, respectively, in good accord with available experimental data. The computed activation barriers for replacing a water ligand in [Be(H2O)4]2+ with F- and SO42-, 10.9 and 13.6 kcal/mol, respectively, are also in good qualitative agreement with available experimental data. These ligand-substitution reactions are indicated to follow associative interchange mechanisms with backside (SN2-like) attack of the anion relative to the aquo ligand it is displacing. Outperforming static density functional theory computations of the salient kinetic and thermodynamic quantities involving simple polarizable continuum solvent models, CPMD simulations are validated as a promising tool for studying the structures and speciation of beryllium complexes in aqueous solution.
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Affiliation(s)
- Onyekachi Raymond
- Chemistry, School of Science , University of Waikato , Private Bag 3105 , Hamilton 3240 , New Zealand.,Institute of Environmental Science and Research (ESR) , P.O. Box 50348 , Porirua 5240 , New Zealand.,EaStCHEM School of Chemistry, North Haugh , University of St Andrews , St Andrews , Fife KY16 9ST , U.K
| | - Michael Bühl
- EaStCHEM School of Chemistry, North Haugh , University of St Andrews , St Andrews , Fife KY16 9ST , U.K
| | - Joseph R Lane
- Chemistry, School of Science , University of Waikato , Private Bag 3105 , Hamilton 3240 , New Zealand
| | - William Henderson
- Chemistry, School of Science , University of Waikato , Private Bag 3105 , Hamilton 3240 , New Zealand
| | - Penelope J Brothers
- School of Chemical Sciences , University of Auckland , Private Bag 92019 , Auckland 1142 , New Zealand
| | - Paul G Plieger
- School of Fundamental Sciences , Massey University , Private Bag 11222 , Palmerston North 4410 , New Zealand
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6
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Newcomb K, Tiwari SP, Rai N, Maginn EJ. A molecular dynamics investigation of actinyl–ligand speciation in aqueous solution. Phys Chem Chem Phys 2018; 20:15753-15763. [DOI: 10.1039/c8cp01944d] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Actinyl ions (AnO2n+), the form in which actinides are commonly found in aqueous solution, are important species in the nuclear fuel cycle.
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Affiliation(s)
- Ken Newcomb
- Department of Chemical and Biomolecular Engineering
- University of Notre Dame
- Notre Dame
- USA
| | - Surya Prakash Tiwari
- Department of Chemical and Biomolecular Engineering
- University of Notre Dame
- Notre Dame
- USA
| | - Neeraj Rai
- Dave C. Swalm School of Chemical Engineering
- Mississippi State University
- Mississippi State
- USA
| | - Edward J. Maginn
- Department of Chemical and Biomolecular Engineering
- University of Notre Dame
- Notre Dame
- USA
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7
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Osman HH, Pertierra P, Salvadó MA, Izquierdo-Ruiz F, Recio JM. Structure and bonding in crystalline cesium uranyl tetrachloride under pressure. Phys Chem Chem Phys 2016; 18:18398-405. [DOI: 10.1039/c6cp03876j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
First-principles simulations of Cs2UO2Cl4 under hydrostatic pressure reveal an unexpected variation of the U–O bond length and stretching vibrational frequencies.
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Affiliation(s)
- Hussien H. Osman
- MALTA-Consolider Team and Departamento de Química Física y Analítica
- Universidad de Oviedo
- Oviedo
- Spain
- Department of Chemistry
| | - Pilar Pertierra
- MALTA-Consolider Team and Departamento de Química Física y Analítica
- Universidad de Oviedo
- Oviedo
- Spain
| | - Miguel A. Salvadó
- MALTA-Consolider Team and Departamento de Química Física y Analítica
- Universidad de Oviedo
- Oviedo
- Spain
| | - F. Izquierdo-Ruiz
- MALTA-Consolider Team and Departamento de Química Física y Analítica
- Universidad de Oviedo
- Oviedo
- Spain
| | - J. M. Recio
- MALTA-Consolider Team and Departamento de Química Física y Analítica
- Universidad de Oviedo
- Oviedo
- Spain
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8
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Liu X, Cheng J, He M, Lu X, Wang R. Acidity constants and redox potentials of uranyl ions in hydrothermal solutions. Phys Chem Chem Phys 2016; 18:26040-26048. [DOI: 10.1039/c6cp03469a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report a first principles molecular dynamics (FPMD) study of the structures, acidity constants (pKa) and redox potentials (E0) of uranyl (UO22+) from ambient conditions to 573 K.
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Affiliation(s)
- Xiandong Liu
- State Key Laboratory for Mineral Deposits Research
- School of Earth Sciences and Engineering
- Nanjing University
- Nanjing 210093
- P. R. China
| | - Jun Cheng
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen 361005
- P. R. China
- Department of Chemistry
| | - Mengjia He
- State Key Laboratory for Mineral Deposits Research
- School of Earth Sciences and Engineering
- Nanjing University
- Nanjing 210093
- P. R. China
| | - Xiancai Lu
- State Key Laboratory for Mineral Deposits Research
- School of Earth Sciences and Engineering
- Nanjing University
- Nanjing 210093
- P. R. China
| | - Rucheng Wang
- State Key Laboratory for Mineral Deposits Research
- School of Earth Sciences and Engineering
- Nanjing University
- Nanjing 210093
- P. R. China
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9
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Kumar N, Seminario JM. Solvation of Actinide Salts in Water Using a Polarizable Continuum Model. J Phys Chem A 2015; 119:689-703. [DOI: 10.1021/jp507613a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Narendra Kumar
- Department of Chemical Engineering, ‡Department of Materials Science and Engineering, and §Department of Electrical and Computer Engineering Texas A&M University College Station, Texas 77843, United States
| | - Jorge M. Seminario
- Department of Chemical Engineering, ‡Department of Materials Science and Engineering, and §Department of Electrical and Computer Engineering Texas A&M University College Station, Texas 77843, United States
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10
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Izquierdo-Ruiz F, Menéndez JM, Recio JM. Theoretical analysis of vibrational modes in uranyl aquo chloro complexes. Theor Chem Acc 2015. [DOI: 10.1007/s00214-014-1605-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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11
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Sieffert N, Wipff G. Uranyl extraction by N,N-dialkylamide ligands studied using static and dynamic DFT simulations. Dalton Trans 2015; 44:2623-38. [DOI: 10.1039/c4dt02443e] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
DFT/MM-MD simulations highlight the structure and dynamics of mixed uranyl/nitrato/monoamides (L) complexes at an “oil”/water interface.
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Affiliation(s)
| | - Georges Wipff
- UMR 7177 CNRS
- Laboratoire MSM
- Institut de Chimie
- Université de Strasbourg
- 67000 Strasbourg
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12
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Shi WQ, Yuan LY, Wang CZ, Wang L, Mei L, Xiao CL, Zhang L, Li ZJ, Zhao YL, Chai ZF. Exploring actinide materials through synchrotron radiation techniques. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2014; 26:7807-7848. [PMID: 25169914 DOI: 10.1002/adma.201304323] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2013] [Revised: 04/24/2014] [Indexed: 06/03/2023]
Abstract
Synchrotron radiation (SR) based techniques have been utilized with increasing frequency in the past decade to explore the brilliant and challenging sciences of actinide-based materials. This trend is partially driven by the basic needs for multi-scale actinide speciation and bonding information and also the realistic needs for nuclear energy research. In this review, recent research progresses on actinide related materials by means of various SR techniques were selectively highlighted and summarized, with the emphasis on X-ray absorption spectroscopy, X-ray diffraction and scattering spectroscopy, which are powerful tools to characterize actinide materials. In addition, advanced SR techniques for exploring future advanced nuclear fuel cycles dealing with actinides are illustrated as well.
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Affiliation(s)
- Wei-Qun Shi
- Key Laboratory of Nuclear Radiation and Nuclear Energy Technology, Institute of High Enegy Physics, Chinese Academy of Sciences, Beijing, 100049, China
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13
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Su J, Wang Z, Pan D, Li J. Excited States and Luminescent Properties of UO2F2 and Its Solvated Complexes in Aqueous Solution. Inorg Chem 2014; 53:7340-50. [DOI: 10.1021/ic5006852] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jing Su
- Division
of Nuclear Materials Science and Engineering, Shanghai Institute of
Applied Physics, and Key Laboratory of Nuclear Radiation and Nuclear
Energy Technology, Chinese Academy of Sciences, Shanghai 201800, China
- Department
of Chemistry and Laboratory of Organic Optoelectronics and Molecular
Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Zheming Wang
- William
R. Wiley Environmental Molecular Sciences Laboratory, Pacific Northwest
National Laboratory, P. O. Box 999, Richland, Washington 99352, United States
| | - Duoqiang Pan
- William
R. Wiley Environmental Molecular Sciences Laboratory, Pacific Northwest
National Laboratory, P. O. Box 999, Richland, Washington 99352, United States
- Radiochemistry
Laboratory, School of Nuclear Science and Technology, Lanzhou University, Lanzhou 730000, Gansu, China
| | - Jun Li
- William
R. Wiley Environmental Molecular Sciences Laboratory, Pacific Northwest
National Laboratory, P. O. Box 999, Richland, Washington 99352, United States
- Department
of Chemistry and Laboratory of Organic Optoelectronics and Molecular
Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China
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14
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Hassanali AA, Cuny J, Verdolino V, Parrinello M. Aqueous solutions: state of the art in ab initio molecular dynamics. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2014; 372:20120482. [PMID: 24516179 DOI: 10.1098/rsta.2012.0482] [Citation(s) in RCA: 84] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The simulation of liquids by ab initio molecular dynamics (AIMD) has been a subject of intense activity over the last two decades. The significant increase in computational resources as well as the development of new and efficient algorithms has elevated this method to the status of a standard quantum mechanical tool that is used by both experimentalists and theoreticians. As AIMD computes the electronic structure from first principles, it is free of ad hoc parametrizations and has thus been applied to a large variety of physical and chemical problems. In particular, AIMD has provided microscopic insight into the structural and dynamical properties of aqueous solutions which are often challenging to probe experimentally. In this review, after a brief theoretical description of the Born-Oppenheimer and Car-Parrinello molecular dynamics formalisms, we show how AIMD has enhanced our understanding of the properties of liquid water and its constituent ions: the proton and the hydroxide ion. Thereafter, a broad overview of the application of AIMD to other aqueous systems, such as solvated organic molecules and inorganic ions, is presented. We also briefly describe the latest theoretical developments made in AIMD, such as methods for enhanced sampling and the inclusion of nuclear quantum effects.
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Affiliation(s)
- Ali A Hassanali
- Department of Chemistry and Applied Biosciences, ETH Zurich and Università della Svizzera Italiana, , via G. Buffi 13, 6900 Lugano, Switzerland
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15
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Bühl M, Sieffert N, Wipff G. Structure of a uranyl peroxo complex in aqueous solution from first-principles molecular dynamics simulations. Dalton Trans 2014; 43:11129-37. [DOI: 10.1039/c3dt52413b] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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16
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Maerzke KA, Goff GS, Runde WH, Schneider WF, Maginn EJ. Structure and Dynamics of Uranyl(VI) and Plutonyl(VI) Cations in Ionic Liquid/Water Mixtures via Molecular Dynamics Simulations. J Phys Chem B 2013; 117:10852-68. [DOI: 10.1021/jp405473b] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
| | - George S. Goff
- Chemistry
Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Wolfgang H. Runde
- Chemistry
Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
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17
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Xi J, Lan JH, Lu GW, Zhao YL, Chai ZF, Shi WQ. A density functional theory study of complex species and reactions of Am(III)/Eu(III) with nitrate anions. MOLECULAR SIMULATION 2013. [DOI: 10.1080/08927022.2013.812208] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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18
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Bühl M, Sieffert N, Partouche A, Chaumont A, Wipff G. Speciation of La(III) Chloride Complexes in Water and Acetonitrile: A Density Functional Study. Inorg Chem 2012. [DOI: 10.1021/ic302255a] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Michael Bühl
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews,
Fife KY16 9ST, U.K
| | - Nicolas Sieffert
- UMR-5250
CNRS, Département de Chimie Moléculaire, Université Joseph Fourier Grenoble I, BP 53,
38041 Grenoble Cedex 9, France
| | - Aurélie Partouche
- UMR-5250
CNRS, Département de Chimie Moléculaire, Université Joseph Fourier Grenoble I, BP 53,
38041 Grenoble Cedex 9, France
| | - Alain Chaumont
- UMR 7177 CNRS, Laboratoire MSM, Institut
de Chimie, 1 rue Blaise Pascal, 67000 Strasbourg, France
| | - Georges Wipff
- UMR 7177 CNRS, Laboratoire MSM, Institut
de Chimie, 1 rue Blaise Pascal, 67000 Strasbourg, France
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19
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Leung K, Nenoff TM. Hydration structures of U(III) and U(IV) ions from ab initio molecular dynamics simulations. J Chem Phys 2012; 137:074502. [DOI: 10.1063/1.4742754] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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20
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Lan JH, Shi WQ, Yuan LY, Li J, Zhao YL, Chai ZF. Recent advances in computational modeling and simulations on the An(III)/Ln(III) separation process. Coord Chem Rev 2012. [DOI: 10.1016/j.ccr.2012.04.002] [Citation(s) in RCA: 91] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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21
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Bühl M, Sieffert N, Chaumont A, Wipff G. Water versus Acetonitrile Coordination to Uranyl. Effect of Chloride Ligands. Inorg Chem 2012; 51:1943-52. [DOI: 10.1021/ic202270u] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Michael Bühl
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews, Fife KY16 9ST, U.K
| | - Nicolas Sieffert
- UMR CNRS-UJF 5250, Département de Chimie Moléculaire, Université Joseph Fourier Grenoble I, BP 53, 38041 Grenoble Cedex 9, France
| | - Alain Chaumont
- UMR 7177 CNRS, Laboratoire MSM, Institut de Chimie, 1 rue Blaise Pascal, 67000 Strasbourg,
France
| | - Georges Wipff
- UMR 7177 CNRS, Laboratoire MSM, Institut de Chimie, 1 rue Blaise Pascal, 67000 Strasbourg,
France
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22
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Odoh SO, Schreckenbach G. Theoretical Study of the Structural Properties of Plutonium(IV) and (VI) Complexes. J Phys Chem A 2011; 115:14110-9. [DOI: 10.1021/jp207556b] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Samuel O. Odoh
- Department of Chemistry, University of Manitoba, Winnipeg, MB, Canada R3T 2N2
| | - Georg Schreckenbach
- Department of Chemistry, University of Manitoba, Winnipeg, MB, Canada R3T 2N2
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23
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Bühl M, Wipff G. Insights into Uranyl Chemistry from Molecular Dynamics Simulations. Chemphyschem 2011; 12:3095-105. [DOI: 10.1002/cphc.201100458] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2011] [Revised: 07/28/2011] [Indexed: 11/10/2022]
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24
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Soderholm L, Skanthakumar S, Wilson RE. Structural Correspondence between Uranyl Chloride Complexes in Solution and Their Stability Constants. J Phys Chem A 2011; 115:4959-67. [DOI: 10.1021/jp111551t] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- L. Soderholm
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
| | - S. Skanthakumar
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
| | - Richard E. Wilson
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
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25
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Su J, Zhang K, Schwarz WHE, Li J. Uranyl-Glycine-Water Complexes in Solution: Comprehensive Computational Modeling of Coordination Geometries, Stabilization Energies, and Luminescence Properties. Inorg Chem 2011; 50:2082-93. [DOI: 10.1021/ic200204p] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jing Su
- Department of Chemistry and Laboratory of Organic Optoelectronics and Molecular Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Kai Zhang
- Department of Chemistry and Laboratory of Organic Optoelectronics and Molecular Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China
| | - W. H. Eugen Schwarz
- Department of Chemistry and Laboratory of Organic Optoelectronics and Molecular Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Jun Li
- Department of Chemistry and Laboratory of Organic Optoelectronics and Molecular Engineering of the Ministry of Education, Tsinghua University, Beijing 100084, China
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26
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Bühl M, Grenthe I. Binding modes of oxalate in UO2(oxalate) in aqueous solution studied with first-principles molecular dynamics simulations. Implications for the chelate effect. Dalton Trans 2011; 40:11192-9. [DOI: 10.1039/c1dt10796h] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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27
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Bühl M, Sieffert N, Chaumont A, Wipff G. Water versus Acetonitrile Coordination to Uranyl. Density Functional Study of Cooperative Polarization Effects in Solution. Inorg Chem 2010; 50:299-308. [DOI: 10.1021/ic101950d] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Michael Bühl
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews, Fife KY16 9ST, U.K
| | - Nicolas Sieffert
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews, Fife KY16 9ST, U.K
| | - Alain Chaumont
- UMR 7177 CNRS, Laboratoire MSM, Institut de Chimie, 4 rue Blaise Pascal, 67000 Strasbourg, France
| | - Georges Wipff
- UMR 7177 CNRS, Laboratoire MSM, Institut de Chimie, 4 rue Blaise Pascal, 67000 Strasbourg, France
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28
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Oncák M, Schröder D, Slavícek P. Theoretical study of the microhydration of mononuclear and dinuclear uranium(VI) species derived from solvolysis of uranyl nitrate in water. J Comput Chem 2010; 31:2294-306. [PMID: 20340110 DOI: 10.1002/jcc.21521] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The structures and energetics of mononuclear and dinuclear uranium species formed upon speciation of uranyl(VI) nitrate, UO(2)(NO(3))(2), in water are investigated by quantum chemistry using density functional theory and the wavefunction-based methods (MP2, CCSD, CCSD(T)). We provide a discussion of the basic coordination patterns of the various mono- and dinuclear uranyl compounds [(UO(2))(m)(X,Y)(2m-1)(H2O)(n)](+) (m = 1, 2; n = 0-4) found in a recent mass spectrometric study (Tsierkezos et al., Inorg Chem 2009, 48, 6287). The energetics of the complexation of the uranyl dication to the counterions OH(-) and NO(3) (-) as well as the degradation of the dinuclear species were studied by reference to a test set of 16 representative molecules with the MP2 method and the B3LYP, M06, M06-HF, and M06-2X DFT functionals. All DFT functionals provide structures and energetics close to MP2 results, with M06 family being slightly superior to the standard B3LYP functional.
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Affiliation(s)
- Milan Oncák
- Department of Physical Chemistry, Institute of Chemical Technology Prague, Czech Republic
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29
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Bühl M, Schreckenbach G. Oxygen Exchange in Uranyl Hydroxide via Two “Nonclassical” Ions. Inorg Chem 2010; 49:3821-7. [DOI: 10.1021/ic902508z] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Michael Bühl
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews, Fife KY16 9ST, United Kingdom
| | - Georg Schreckenbach
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba, Canada, R3T 2N2
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30
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Páez-Hernández D, Ramírez-Tagle R, Codorniu-Hernández E, Montero-Cabrera LA, Arratia-Pérez R. Quantum relativistic investigation about the coordination and bonding effects of different ligands on uranyl complexes. Polyhedron 2010. [DOI: 10.1016/j.poly.2009.11.019] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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31
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Kelly SD. Uranium Chemistry in Soils and Sediments. SYNCHROTRON-BASED TECHNIQUES IN SOILS AND SEDIMENTS 2010. [DOI: 10.1016/s0166-2481(10)34014-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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32
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Fry AJ, Steffen LK. On the nature of tetraalkylammonium ions in common electrochemical solvents: General and specific solvation – Quantitative aspects. J Electroanal Chem (Lausanne) 2010. [DOI: 10.1016/j.jelechem.2009.11.011] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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33
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Bühl M, Schreckenbach G, Sieffert N, Wipff G. Effect of Counterions on the Structure and Stability of Aqueous Uranyl(VI) Complexes. A First-Principles Molecular Dynamics Study. Inorg Chem 2009; 48:9977-9. [DOI: 10.1021/ic901298q] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Michael Bühl
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews, Fife KY16 9ST, Scotland, United Kingdom
| | - Georg Schreckenbach
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba R3T 2N2, Canada
| | - Nicolas Sieffert
- School of Chemistry, University of St. Andrews, North Haugh, St. Andrews, Fife KY16 9ST, Scotland, United Kingdom
| | - Georges Wipff
- Laboratoire MSM, Institut de Chimie, UMR 7177 CNRS, 4 rue Blaise Pascal, 67000 Strasbourg, France
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34
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Bühl M. Structure and stability of aquotetrafluorouranyl(VI) in the solid state — Density functional study of [UO2F4(H2O)][NMe4]2·2H2O,. CAN J CHEM 2009. [DOI: 10.1139/v08-182] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Periodic density functional computations have been performed for solid [UO2F4(H2O)][NMe4]2·2H2O at the BLYP level. A model with disordered fluoro and aquo ligands in the uranyl anion is significantly lower in energy than one with a symmetrical assignment of these sites, which was favored in the original X-ray crystallography study. According to optimized energies and Car–Parrinello molecular dynamics (CPMD) simulations, the [UO2F4(H2O)]2− ion in the solid is stable with respect to loss of the coordinated water molecule. In contrast, CPMD simulations had found this ligand to be unbound in aqueous solution. The role of the counterions in stabilizing the higher coordination number in the crystal is discussed.
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Affiliation(s)
- Michael Bühl
- School of Chemistry, North Haugh, University of St. Andrews, St. Andrews, KY16 9ST Fife, UK (e-mail: )
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35
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Bühl M, Sieffert N, Wipff G. Density functional study of aqueous uranyl(VI) fluoride complexes. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2008.11.015] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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36
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Rotzinger FP. Mechanism for the Substitution of an Aqua Ligand of UO2(OH2)52+ by Chloride. J Chem Theory Comput 2008; 4:1654-8. [DOI: 10.1021/ct8001305] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- François P. Rotzinger
- Institut des Sciences et Ingénierie Chimiques (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Station 6, CH-1015 Lausanne, Switzerland
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37
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Chaumont A, Wipff G. Chloride Complexation by Uranyl in a Room Temperature Ionic Liquid. A Computational Study. J Phys Chem B 2008; 112:12014-23. [DOI: 10.1021/jp8031447] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Alain Chaumont
- Laboratoire MSM, UMR CNRS 7551, Institut de Chimie, 4 rue B. Pascal, 67 000 Strasbourg, France
| | - Georges Wipff
- Laboratoire MSM, UMR CNRS 7551, Institut de Chimie, 4 rue B. Pascal, 67 000 Strasbourg, France
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