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For: Rizzi AC, van Gastel M, Liddell PA, Palacios RE, Moore GF, Kodis G, Moore AL, Moore TA, Gust D, Braslavsky SE. Entropic Changes Control the Charge Separation Process in Triads Mimicking Photosynthetic Charge Separation. J Phys Chem A 2008;112:4215-23. [DOI: 10.1021/jp712008b] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Number Cited by Other Article(s)
1
Liu Y, Mulvihill E, Geva E. Combining the generalized quantum master equation approach with quasiclassical mapping Hamiltonian methods to simulate the dynamics of electronic coherences. J Chem Phys 2024;161:164101. [PMID: 39435829 DOI: 10.1063/5.0232462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Accepted: 10/04/2024] [Indexed: 10/23/2024]  Open
2
Cai B, Song H, Brnovic A, Pavliuk MV, Hammarström L, Tian H. Promoted Charge Separation and Long-Lived Charge-Separated State in Porphyrin-Viologen Dyad Nanoparticles. J Am Chem Soc 2023;145:18687-18692. [PMID: 37582183 PMCID: PMC10472426 DOI: 10.1021/jacs.3c04372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Indexed: 08/17/2023]
3
Lyu N, Mulvihill E, Soley MB, Geva E, Batista VS. Tensor-Train Thermo-Field Memory Kernels for Generalized Quantum Master Equations. J Chem Theory Comput 2023;19:1111-1129. [PMID: 36719350 DOI: 10.1021/acs.jctc.2c00892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
4
Lai Y, Geva E. Electronic Absorption Spectra from Off-Diagonal Quantum Master Equations. J Chem Phys 2022;157:104115. [DOI: 10.1063/5.0106888] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
5
Mulvihill E, Geva E. Simulating the dynamics of electronic observables via reduced-dimensionality generalized quantum master equations. J Chem Phys 2022;156:044119. [DOI: 10.1063/5.0078040] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]  Open
6
Lai Y, Geva E. On simulating the dynamics of electronic populations and coherences via quantum master equations based on treating off-diagonal electronic coupling terms as a small perturbation. J Chem Phys 2021;155:204101. [PMID: 34852488 DOI: 10.1063/5.0069313] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
7
Mulvihill E, Geva E. A Road Map to Various Pathways for Calculating the Memory Kernel of the Generalized Quantum Master Equation. J Phys Chem B 2021;125:9834-9852. [PMID: 34424700 DOI: 10.1021/acs.jpcb.1c05719] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
8
Mulvihill E, Lenn KM, Gao X, Schubert A, Dunietz BD, Geva E. Simulating energy transfer dynamics in the Fenna-Matthews-Olson complex via the modified generalized quantum master equation. J Chem Phys 2021;154:204109. [PMID: 34241158 DOI: 10.1063/5.0051101] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
9
Brian D, Liu Z, Dunietz BD, Geva E, Sun X. Three-state harmonic models for photoinduced charge transfer. J Chem Phys 2021;154:174105. [PMID: 34241055 DOI: 10.1063/5.0050289] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
10
Gao X, Geva E. Improving the Accuracy of Quasiclassical Mapping Hamiltonian Methods by Treating the Window Function Width as an Adjustable Parameter. J Phys Chem A 2020;124:11006-11016. [DOI: 10.1021/acs.jpca.0c09750] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
11
Tong Z, Gao X, Cheung MS, Dunietz BD, Geva E, Sun X. Charge transfer rate constants for the carotenoid-porphyrin-C60 molecular triad dissolved in tetrahydrofuran: The spin-boson model vs the linearized semiclassical approximation. J Chem Phys 2020;153:044105. [DOI: 10.1063/5.0016160] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
12
Gao X, Saller MAC, Liu Y, Kelly A, Richardson JO, Geva E. Benchmarking Quasiclassical Mapping Hamiltonian Methods for Simulating Electronically Nonadiabatic Molecular Dynamics. J Chem Theory Comput 2020;16:2883-2895. [DOI: 10.1021/acs.jctc.9b01267] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
13
Mulvihill E, Gao X, Liu Y, Schubert A, Dunietz BD, Geva E. Combining the mapping Hamiltonian linearized semiclassical approach with the generalized quantum master equation to simulate electronically nonadiabatic molecular dynamics. J Chem Phys 2019;151:074103. [DOI: 10.1063/1.5110891] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
14
Mulvihill E, Schubert A, Sun X, Dunietz BD, Geva E. A modified approach for simulating electronically nonadiabatic dynamics via the generalized quantum master equation. J Chem Phys 2019;150:034101. [DOI: 10.1063/1.5055756] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
15
Kananenka AA, Sun X, Schubert A, Dunietz BD, Geva E. A comparative study of different methods for calculating electronic transition rates. J Chem Phys 2018;148:102304. [DOI: 10.1063/1.4989509] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
16
Kananenka AA, Hsieh CY, Cao J, Geva E. Nonadiabatic Dynamics via the Symmetrical Quasi-Classical Method in the Presence of Anharmonicity. J Phys Chem Lett 2018;9:319-326. [PMID: 29239614 DOI: 10.1021/acs.jpclett.7b03002] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
17
Sun X, Geva E. Non-Condon nonequilibrium Fermi’s golden rule rates from the linearized semiclassical method. J Chem Phys 2016. [DOI: 10.1063/1.4960337] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
18
Sun X, Geva E. Non-Condon equilibrium Fermi’s golden rule electronic transition rate constants via the linearized semiclassical method. J Chem Phys 2016;144:244105. [DOI: 10.1063/1.4954509] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
19
Sun X, Geva E. Nonequilibrium Fermi’s Golden Rule Charge Transfer Rates via the Linearized Semiclassical Method. J Chem Theory Comput 2016;12:2926-41. [DOI: 10.1021/acs.jctc.6b00236] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
20
Sun X, Geva E. Equilibrium Fermi’s Golden Rule Charge Transfer Rate Constants in the Condensed Phase: The Linearized Semiclassical Method vs Classical Marcus Theory. J Phys Chem A 2015;120:2976-90. [DOI: 10.1021/acs.jpca.5b08280] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
21
Manna AK, Balamurugan D, Cheung MS, Dunietz BD. Unraveling the Mechanism of Photoinduced Charge Transfer in Carotenoid-Porphyrin-C60 Molecular Triad. J Phys Chem Lett 2015;6:1231-1237. [PMID: 26262978 DOI: 10.1021/acs.jpclett.5b00074] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
22
Manna AK, Lee MH, McMahon KL, Dunietz BD. Calculating High Energy Charge Transfer States Using Optimally Tuned Range-Separated Hybrid Functionals. J Chem Theory Comput 2015;11:1110-7. [DOI: 10.1021/ct501018n] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
23
Ajisaka S, Žunkovič B, Dubi Y. The molecular photo-cell: quantum transport and energy conversion at strong non-equilibrium. Sci Rep 2015;5:8312. [PMID: 25660494 PMCID: PMC4321170 DOI: 10.1038/srep08312] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2014] [Accepted: 01/08/2015] [Indexed: 12/25/2022]  Open
24
Ray A, Bauri A, Bhattacharya S. Absorption spectrophotometric, fluorescence and quantum chemical investigations on non-covalent interaction between PC₇₀BM and designed diporphyrin in solution. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015;134:566-573. [PMID: 25138385 DOI: 10.1016/j.saa.2014.06.089] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2014] [Revised: 06/05/2014] [Accepted: 06/12/2014] [Indexed: 06/03/2023]
25
Olguin M, Basurto L, Zope RR, Baruah T. The effect of structural changes on charge transfer states in a light-harvesting carotenoid-diaryl-porphyrin-C60 molecular triad. J Chem Phys 2014;140:204309. [PMID: 24880282 DOI: 10.1063/1.4876075] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
26
Balamurugan D, Aquino AJA, de Dios F, Flores L, Lischka H, Cheung MS. Multiscale Simulation of the Ground and Photo-Induced Charge-Separated States of a Molecular Triad in Polar Organic Solvent: Exploring the Conformations, Fluctuations, and Free Energy Landscapes. J Phys Chem B 2013;117:12065-75. [DOI: 10.1021/jp4026927] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
27
Onidas D, Sipka G, Asztalos E, Maróti P. Mutational control of bioenergetics of bacterial reaction center probed by delayed fluorescence. BIOCHIMICA ET BIOPHYSICA ACTA 2013;1827:1191-9. [PMID: 23685111 DOI: 10.1016/j.bbabio.2013.05.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2013] [Revised: 05/01/2013] [Accepted: 05/09/2013] [Indexed: 10/26/2022]
28
Matt B, Xiang X, Kaledin AL, Han N, Moussa J, Amouri H, Alves S, Hill CL, Lian T, Musaev DG, Izzet G, Proust A. Long lived charge separation in iridium(iii)-photosensitized polyoxometalates: synthesis, photophysical and computational studies of organometallic–redox tunable oxide assemblies. Chem Sci 2013. [DOI: 10.1039/c3sc21998d] [Citation(s) in RCA: 69] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
29
Alternating electron and proton transfer steps in photosynthetic water oxidation. Proc Natl Acad Sci U S A 2012;109:16035-40. [PMID: 22988080 DOI: 10.1073/pnas.1206266109] [Citation(s) in RCA: 146] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
30
Fast structural changes (200-900ns) may prepare the photosynthetic manganese complex for oxidation by the adjacent tyrosine radical. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2012;1817:1196-207. [PMID: 22579714 DOI: 10.1016/j.bbabio.2012.04.017] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2012] [Revised: 04/25/2012] [Accepted: 04/30/2012] [Indexed: 11/20/2022]
31
Su G, Czader A, Homouz D, Bernardes G, Mateen S, Cheung MS. Multiscale Simulation on a Light-Harvesting Molecular Triad. J Phys Chem B 2012;116:8460-73. [DOI: 10.1021/jp212273n] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
32
Charge separation in a covalently-linked phthalocyanine-oligo(p-phenylenevinylene)-C60 system. Influence of the solvent polarity. J Inorg Biochem 2012;108:216-24. [DOI: 10.1016/j.jinorgbio.2011.11.011] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2011] [Revised: 11/14/2011] [Accepted: 11/14/2011] [Indexed: 01/02/2023]
33
Hughes JL, Krausz E. The Chemical Problem of Energy Change: Multi-Electron Processes. Aust J Chem 2012. [DOI: 10.1071/ch12105] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
34
Listening to PS II: Enthalpy, entropy, and volume changes. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2011;104:357-65. [DOI: 10.1016/j.jphotobiol.2011.03.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2010] [Revised: 03/05/2011] [Accepted: 03/08/2011] [Indexed: 11/17/2022]
35
Kahnt A, Kärnbratt J, Esdaile LJ, Hutin M, Sawada K, Anderson HL, Albinsson B. Temperature dependence of charge separation and recombination in porphyrin oligomer-fullerene donor-acceptor systems. J Am Chem Soc 2011;133:9863-71. [PMID: 21595470 PMCID: PMC3119959 DOI: 10.1021/ja2019367] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2011] [Indexed: 01/12/2023]
36
Methodology of pulsed photoacoustics and its application to probe photosystems and receptors. SENSORS 2010;10:5642-67. [PMID: 22219680 PMCID: PMC3247725 DOI: 10.3390/s100605642] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2010] [Revised: 05/27/2010] [Accepted: 05/27/2010] [Indexed: 11/16/2022]
37
Rio Y, Seitz W, Gouloumis A, Vázquez P, Sessler J, Guldi D, Torres T. A Panchromatic Supramolecular Fullerene-Based Donor-Acceptor Assembly Derived from a Peripherally Substituted Bodipy-Zinc Phthalocyanine Dyad. Chemistry 2010;16:1929-40. [DOI: 10.1002/chem.200902507] [Citation(s) in RCA: 106] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
38
Rodríguez-Morgade MS, Plonska-Brzezinska ME, Athans AJ, Carbonell E, de Miguel G, Guldi DM, Echegoyen L, Torres T. Synthesis, characterization, and photoinduced electron transfer processes of orthogonal ruthenium phthalocyanine-fullerene assemblies. J Am Chem Soc 2009;131:10484-96. [PMID: 19722625 DOI: 10.1021/ja902471w] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
39
Ghosh PK, Smirnov AY, Nori F. Modeling light-driven proton pumps in artificial photosynthetic reaction centers. J Chem Phys 2009;131:035102. [DOI: 10.1063/1.3170939] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
40
Spallanzani N, Rozzi CA, Varsano D, Baruah T, Pederson MR, Manghi F, Rubio A. Photoexcitation of a light-harvesting supramolecular triad: a time-dependent DFT study. J Phys Chem B 2009;113:5345-9. [PMID: 19331406 DOI: 10.1021/jp900820q] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
41
Hou HJM, Shen G, Boichenko VA, Golbeck JH, Mauzerall D. Thermodynamics of Charge Separation of Photosystem I in the menA and menB Null Mutants of Synechocystis sp. PCC 6803 Determined by Pulsed Photoacoustics. Biochemistry 2009;48:1829-37. [DOI: 10.1021/bi801951t] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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