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Zhabanov YA, Sliznev VV, Ryzhov IV, Stuzhin PA. Peculiarities of electronic structure and chemical bonding in iron and cobalt metal complexes of porphyrazine and tetra(1,2,5-thiadiazole)porphyrazine. J PORPHYR PHTHALOCYA 2020. [DOI: 10.1142/s1088424620500285] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The geometrical and electronic structures of iron and cobalt metal complexes of porphyrazine and tetra(1,2,5-thiadiazole)porphyrazine in ground and low-lying excited electronic states were determined by DFT calculations and the complete active space (CASSCF) method with following accounting dynamic correlation by multiconfigurational quasidegenerate second-order perturbation theory (MCQDPT2). A geometrical structure of D[Formula: see text] symmetry has been obtained for all four complexes. According to data obtained by the MCQDPT2 method, the complexes of cobalt and iron possess the ground states 2A[Formula: see text] and 3A[Formula: see text], respectively, and wave functions of the ground states have the form of a single determinant. It is shown that the crystal field theory (CFT) can be used to describe the sequence of electronic states of the investigated complexes. The nature of the bonds between metal atoms and nitrogen atoms has been described using the analysis of the electron density distribution in the frame of Bader’s quantum theory of atoms in molecule (QTAIM).
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Affiliation(s)
- Yuriy A. Zhabanov
- Ivanovo State University of Chemistry and Technology, Research Institute of Macroheterocycles, Sheremetevskiy Avenue, 7, Ivanovo 153000, Russia
| | - Valery V. Sliznev
- Ivanovo State University of Chemistry and Technology, Research Institute of Macroheterocycles, Sheremetevskiy Avenue, 7, Ivanovo 153000, Russia
| | - Igor V. Ryzhov
- Ivanovo State University of Chemistry and Technology, Research Institute of Macroheterocycles, Sheremetevskiy Avenue, 7, Ivanovo 153000, Russia
| | - Pavel A. Stuzhin
- Ivanovo State University of Chemistry and Technology, Research Institute of Macroheterocycles, Sheremetevskiy Avenue, 7, Ivanovo 153000, Russia
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Gas-phase structures of hemiporphyrazine and dicarbahemiporphyrazine: Key role of interactions inside coordination cavity. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.02.022] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Combined gas-phase electron diffraction/mass spectrometry and DFT study of the molecular structure of zinc(II) etioporphyrin-II. Struct Chem 2015. [DOI: 10.1007/s11224-015-0656-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Semenov SG, Makarova MV. Quantum chemical study Ca@C60 and Sc+@C60 endo complexes in the gas phase and pyridine. RUSS J GEN CHEM+ 2015. [DOI: 10.1134/s1070363215040210] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Ikeda T, Iino R, Noji H. Real-time fluorescence visualization of slow tautomerization of single free-base phthalocyanines under ambient conditions. Chem Commun (Camb) 2014; 50:9443-6. [DOI: 10.1039/c4cc02574a] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Tverdova NV, Girichev GV, Krasnov AV, Pimenov OA, Koifman OI. The molecular structure, bonding, and energetics of oxovanadium phthalocyanine: an experimental and computational study. Struct Chem 2013. [DOI: 10.1007/s11224-013-0259-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Tverdova NV, Pimenov OA, Girichev GV, Shlykov SA, Giricheva NI, Mayzlish VE, Koifman OI. Accurate molecular structure of nickel phthalocyanine (NiN8C32H16): Gas-phase electron diffraction and quantum-chemical calculations. J Mol Struct 2012. [DOI: 10.1016/j.molstruc.2012.05.066] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Yang Y. Pyrrolic macrocycles with stabilized triplet states: Metal-centered and ligand-centered separation of unpaired electrons. Polyhedron 2012. [DOI: 10.1016/j.poly.2012.05.022] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Nemykin VN, Sabin JR. Profiling energetics and spectroscopic signatures in prototropic tautomers of asymmetric phthalocyanine analogues. J Phys Chem A 2012; 116:7364-71. [PMID: 22691046 DOI: 10.1021/jp304386x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Density functional theory (DFT) and time-dependent density functional theory (TDDFT) were used to explain discrepancies in UV-vis and MCD spectra of the metal-free tribenzo[b,g,l]thiopheno[3,4-q]porphyrazine (1), substituted tribenzo[b,g,l]porphyrazine (2), and 2,3-bis(methylcarboxyl)phthalocyanine (3). On the basis of gas-phase and polarized continuum solvation model (PCM) DFT and TDDFT calculations, it was suggested that both NH tautomers contribute to the spectroscopic signature of 1, whereas the Q-band region of 2 and 3 is dominated by a single NH tautomer. For all tested compounds, it was found that the combination of the BP86 exchange-correlation functional, 6-31G(d) basis set, and TDDFT-PCM approach provides the best accuracy in energies of the Q(x)- and Q(y)-bands of the individual NH tautomers as well as correctly describes their relative energy differences, which are important in understanding of experimental spectroscopy of the target systems.
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Affiliation(s)
- Victor N Nemykin
- Department of Chemistry and Biochemistry, 1039 University Drive, University of Minnesota, Duluth, Minnesota 55812, United States.
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Yang Y. Effects induced by axial ligands binding to tetrapyrrole-based aromatic metallomacrocycles. J Phys Chem A 2011; 115:9043-54. [PMID: 21755961 DOI: 10.1021/jp204531e] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The axial positions of planar metallomacrocycles are unoccupied. The positively charged metal is thus a potential binding site for electron-donating groups. The binding strength is affected by the central metal, the ligand, and the macrocycle. One ligand leads to the out-of-plane displacement of the central metal, whereas two ligands from two sides structurally neutralize each other. The axial ligand donates charge to the central metal and the macrocycle when the lone pair orients along the interaction axis. The frontier orbital levels are elevated because of the charge donated to the macrocycle. Even though the singlet-triplet gap and the absorption maximum do not change significantly upon binding, the redox chemistry is considerably affected by the shifts of orbital levels. The macrocyclic M-N bonds are weakened by the binding, but their natures remain almost unchanged. Calcium phthalocyanine is a special case, as the central calcium is too large to fit the cavity. Accordingly, multiple ligands facilely bind to the calcium from one side. The aluminum phthalocyanine halogen is another special case, as it has a halogen ligand coordinating to the aluminum through a nondative bond. This leads to some effects different from those caused by dative binding. When there is no considerable steric demand, the lone pair points along the interaction axis to facilitate the donation. When in a stacked dimer, the electron-rich group is part of a large molecule, and the orientation of the lone pair is approximately perpendicular to the interaction axis. This induces the charge loss of the central metal. Because metallomacrocycles are widespread in the biological, medical, and material sciences, the results from this study are expected to bring useful insights to these fields.
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Affiliation(s)
- Yang Yang
- Department of Chemistry, Case Western Reserve University, Cleveland, Ohio 44106, USA.
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Chizhik AM, Jäger R, Chizhik AI, Bär S, Mack HG, Sackrow M, Stanciu C, Lyubimtsev A, Hanack M, Meixner AJ. Optical imaging of excited-state tautomerization in single molecules. Phys Chem Chem Phys 2011; 13:1722-33. [DOI: 10.1039/c0cp02228d] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Lu X, He Y, Chen J, Wang J, Shi H. Theoretical Study of the Inner Hydrogen Migration in the β-Substituted 5,10,15,20-Tetraphenylporphyrins. J Phys Chem A 2010; 114:12731-8. [DOI: 10.1021/jp107145p] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xiaoquan Lu
- Key Laboratory of Bioelectrochemistry and Environmental Analysis of Gansu Province, College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, 730070, China
| | - Yong He
- Key Laboratory of Bioelectrochemistry and Environmental Analysis of Gansu Province, College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, 730070, China
| | - Jing Chen
- Key Laboratory of Bioelectrochemistry and Environmental Analysis of Gansu Province, College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, 730070, China
| | - Jinfeng Wang
- Key Laboratory of Bioelectrochemistry and Environmental Analysis of Gansu Province, College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, 730070, China
| | - Haicai Shi
- Key Laboratory of Bioelectrochemistry and Environmental Analysis of Gansu Province, College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, 730070, China
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Murray C, Dozova N, McCaffrey JG, FitzGerald S, Shafizadeh N, Crépin C. Infra-red and Raman spectroscopy of free-base and zinc phthalocyanines isolated in matrices. Phys Chem Chem Phys 2010; 12:10406-22. [DOI: 10.1039/c0cp00055h] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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Kahlal S, Mentec A, Pondaven A, L’Her M, Saillard JY. Substituent effect in unsymmetrical lutetium bisphthalocyanines: a DFT analysis. NEW J CHEM 2009. [DOI: 10.1039/b810131k] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Strenalyuk T, Samdal S, Volden HV. Molecular structures of chloro(phthalocyaninato)-aluminum(III) and -gallium(III) as determined by gas electron diffraction and quantum chemical calculations: quantum chemical calculations on fluoro(phthalocyaninato)-aluminum(III) and -gallium(III), chloro(tetrakis(1,2,5-thiadiazole)porphyrazinato)-aluminum(III) and -gallium(III) and comparison with their X-ray structures. J Phys Chem A 2008; 112:9075-82. [PMID: 18754601 DOI: 10.1021/jp804105d] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The molecular structures of chloro(phthalocyaninato)aluminum(III) (ClPcAl) and chloro(phthalocyaninato)gallium(III) (ClPcGa) have been determined by using the gas electron diffraction (GED) method and augmented by quantum chemical calculations. The molecular structures of fluoro(phthalocyaninato)aluminum(III) (FPcAl), fluoro(phthalocyaninato) gallium(III) (FPcGa), chloro(tetrakis(1,2,5-thiadiazole)porphyrazinato)aluminum(III) (ClTTDPzAl), and chloro(tetrakis(1,2,5-thiadiazole)porphyrazinato)gallium(III) (ClTTDPzGa) have been optimized at the level B3LYP with basis sets 6-31G*, 6-311++G**, and cc-pVTZ, and the structures have been compared with those obtained by X-ray diffraction. Vibrational frequencies have been calculated for all six molecules at all basis sets combinations, except B3LYP/cc-pVTZ. These calculations predict that all molecules have C 4 v symmetry with the metal atom above the plane defined by the four inner cavity N atoms and an almost planar macrocycle. The most important structure parameters (GED|B3LYP/cc-pVTZ) are h (height of the metal atom above the inner cavity) h = 50.3(32)|44.9 pm, r(Al-Cl) = 214.5(16)|217.4 pm, r(Al-N) = 197.6(9)|198.7 pm, angle(Cl-Al-N) = 104.8(9)|103.1 degrees, angle(Al-N-C) = 124.2(7)|125.9 degrees for ClPcAl, and the corresponding values for ClPcGa are h = 53.1(28)|50.2 pm, r(Ga-Cl) = 218.9(14)|222.3 pm, r(Ga-N) = 200.6(8)|202.6 pm, angle(Cl-Ga-N) = 105.4(8)|104.3 degrees, angle(Ga-N-C) = 123.8(8)|125.0 degrees. Parenthesized values are estimated error limits defined as 2.5(sigma(2)(lsq) + (0.001 x r)(2))(1/2) for distances and 2.5sigma(lsq) for angles. The title compounds are all flexible molecules with about five vibrational frequencies below 100 cm(-1).
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Affiliation(s)
- Tatyana Strenalyuk
- Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, NO-0315 Oslo, Norway
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