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Chen ZX, Su XX, Deng SP. Molecular Recognition of Melamine by Vesicles Spontaneously Formed from Orotic Acid Derived Bolaamphiphiles. J Phys Chem B 2010; 115:1798-806. [DOI: 10.1021/jp106385x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Zhong-Xiu Chen
- Department of Applied Chemistry, College of Food & Biology Engineering, and ‡Food Sensory Lab, Zhejiang Gongshang University, Hangzhou, Zhejiang 310035, P. R. China
| | - Xiao-Xia Su
- Department of Applied Chemistry, College of Food & Biology Engineering, and ‡Food Sensory Lab, Zhejiang Gongshang University, Hangzhou, Zhejiang 310035, P. R. China
| | - Shao-Ping Deng
- Department of Applied Chemistry, College of Food & Biology Engineering, and ‡Food Sensory Lab, Zhejiang Gongshang University, Hangzhou, Zhejiang 310035, P. R. China
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Boda A, Ali SM, Shenoi MRK, Rao H, Ghosh SK. DFT modeling on the suitable crown ether architecture for complexation with Cs⁺ and Sr²⁺ metal ions. J Mol Model 2010; 17:1091-108. [PMID: 20676707 DOI: 10.1007/s00894-010-0812-7] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2010] [Accepted: 07/14/2010] [Indexed: 12/01/2022]
Abstract
Crown ether architectures were explored for the inclusion of Cs(+) and Sr(2+) ions within nano-cavity of macrocyclic crown ethers using density functional theory (DFT) modeling. The modeling was undertaken to gain insight into the mechanism of the complexation of Cs(+) and Sr(2+) ion with this ligand experimentally. The selectivity of Cs(+) and Sr(2+) ions for a particular size of crown ether has been explained based on the fitting and binding interaction of the guest ions in the narrow cavity of crown ethers. Although, Di-Benzo-18-Crown-6 (DB18C6) and Di-Benzo-21-Crown-7 (DB21C7) provide suitable host architecture for Sr(2+) and Cs(+) ions respectively as the ion size match with the cavity of the host, but consideration of binding interaction along with the cavity matching both DB18C6 and DB21C7 prefers Sr(2+) ion. The calculated values of binding enthalpy of Cs metal ion with the crown ethers were found to be in good agreement with the experimental results. The gas phase binding enthalpy for Sr(2+) ion with crown ether was higher than Cs metal ion. The ion exchange reaction between Sr and Cs always favors the selection of Sr metal ion both in the gas and in micro-solvated systems. The gas phase selectivity remains unchanged in micro-solvated phase. We have demonstrated the effect of micro-solvation on the binding interaction between the metal ions (Cs(+) and Sr(2+)) and the macrocyclic crown ethers by considering micro-solvated metal ions up to eight water molecules directly attached to the metal ion and also by considering two water molecules attached to metal-ion-crown ether complexes. A metal ion exchange reaction involving the replacement of strontium ion in metal ion-crown ether complexes with cesium ion contained within a metal ion-water cluster serves as the basis for modeling binding preferences in solution. The calculated O-H stretching frequency of H(2)O molecule in micro-solvated metal ion-crown complexes is more red-shifted in comparison to hydrated metal ions. The calculated IR spectra can be compared with an experimental spectrum to determine the presence of micro-solvated metal ion-crown ether complexes in extractant phase.
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Affiliation(s)
- Anil Boda
- Chemical Engineering Group, Bhabha Atomic Research center, Mumbai 400085, India
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Korchowiec B, Orlof M, Sautrey G, Ben Salem A, Korchowiec J, Regnouf-de-Vains JB, Rogalska E. The Mechanism of Metal Cation Binding in Two Nalidixate Calixarene Conjugates. A Langmuir Film and Molecular Modeling Study. J Phys Chem B 2010; 114:10427-35. [DOI: 10.1021/jp102471c] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Beata Korchowiec
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
| | - Monika Orlof
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
| | - Guillaume Sautrey
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
| | - Adel Ben Salem
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
| | - Jacek Korchowiec
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
| | - Jean-Bernard Regnouf-de-Vains
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
| | - Ewa Rogalska
- Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland, Equipe GEVSM, Structure et Réactivité des Systèmes Moléculaires Complexes, UMR 7565 Nancy Université/CNRS, BP 239, 54506 Vandoeuvre-lès-Nancy cedex, France, and Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, ul. R. Ingardena 3, 30-060 Krakow, Poland
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7
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Korchowiec J, Korchowiec B, Priebe W, Rogalska E. DFT Study on the Selectivity of Complexation of Metal Cations with a Dioxadithia Crown Ether Ligand. J Phys Chem A 2008; 112:13633-40. [DOI: 10.1021/jp8066052] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jacek Korchowiec
- Department of Theoretical Chemistry and Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow, Poland, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, and Structure et Réactivité des Systèmes Moléculaires Complexes, BP 239, CNRS/Nancy Université, 54506 Vandoeuvre-lès-Nancy cedex, France
| | - Beata Korchowiec
- Department of Theoretical Chemistry and Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow, Poland, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, and Structure et Réactivité des Systèmes Moléculaires Complexes, BP 239, CNRS/Nancy Université, 54506 Vandoeuvre-lès-Nancy cedex, France
| | - Waldemar Priebe
- Department of Theoretical Chemistry and Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow, Poland, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, and Structure et Réactivité des Systèmes Moléculaires Complexes, BP 239, CNRS/Nancy Université, 54506 Vandoeuvre-lès-Nancy cedex, France
| | - Ewa Rogalska
- Department of Theoretical Chemistry and Department of Physical Chemistry and Electrochemistry, Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow, Poland, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, and Structure et Réactivité des Systèmes Moléculaires Complexes, BP 239, CNRS/Nancy Université, 54506 Vandoeuvre-lès-Nancy cedex, France
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