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Salha MS, Yada RY, Farrar DH, Chass GA, Tian KV, Bodo E. Aluminium catalysed oligomerisation in cement-forming silicate systems. Phys Chem Chem Phys 2022; 25:455-461. [PMID: 36477563 DOI: 10.1039/d2cp03918d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Alumino-silicates form the backbone of structural materials including cements and the concrete they form. However, the nanoscale aspects of the oligomerisation mechanisms elongating the (alumino-)silicate chains is not fully clarified; the role of aluminium in particular. Herein, we explore and contrast the growth of silicate and alumino-silicate oligomers by both neutral and anionic mechanisms, with focus on the influence of Al on oligomer structure and stability. Further, the spontaneity of chain lengthening in the absence and presence of Al of differing coordination (Al-IV, V, VI) was characterised. Result trends showed Al-IV facilitating oligomerisation in neutral conditions, with respect to Si only systems, effectively promoting longer chain formation and stabilisation. The anionic pathway similarly showed Al reducing the overall energetic barriers to oligomerisation. In both conditions, Al's coordinative and structural flexibility, at O-Al-O hinge points in particular, was responsible for the lowering of the energetic expense for oligomerisation. The results and implications resolved herein are informative for chain formation and stability for bulk material properties of alumino-silicate materials such as cements, where the aluminosilicate systems are dominated by short chains of 2-5 units in length.
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Affiliation(s)
- Mohammed S Salha
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Roma, Italy.,Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Ontario, L8S 4M1, Canada
| | - Rickey Y Yada
- Faculty of Land and Food Systems, The University of British Columbia, Vancouver, British Columbia, V6T 1Z4, Canada
| | - David H Farrar
- Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Ontario, L8S 4M1, Canada
| | - Gregory A Chass
- Faculty of Land and Food Systems, The University of British Columbia, Vancouver, British Columbia, V6T 1Z4, Canada.,Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Ontario, L8S 4M1, Canada.,School of Physical and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK.
| | - Kun V Tian
- Faculty of Land and Food Systems, The University of British Columbia, Vancouver, British Columbia, V6T 1Z4, Canada.,Department of Chemistry and Chemical Biology, McMaster University, Hamilton, Ontario, L8S 4M1, Canada.,Department of Chemical Science and Pharmaceutical Technologies, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Roma, Italy.
| | - Enrico Bodo
- Department of Chemistry, Sapienza University of Rome, Piazzale Aldo Moro 5, 00185, Roma, Italy
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Li JP, Dou LJ, Mu WH. Electronic and Steric Control of Rates and Selectivities in Rhodium-Catalyzed [2+2+2] Cycloadditions for Constructing Fused Tricyclic Hydronaphthofurans: A Density Functional Theory Study. J Org Chem 2022; 87:16328-16342. [DOI: 10.1021/acs.joc.2c01937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Affiliation(s)
- Jiang-Ping Li
- Faculty of Chemistry and Chemical Engineering, Yunnan Normal University, Kunming 650092, China
| | - Li-Juan Dou
- Faculty of Chemistry and Chemical Engineering, Yunnan Normal University, Kunming 650092, China
| | - Wei-Hua Mu
- Faculty of Chemistry and Chemical Engineering, Yunnan Normal University, Kunming 650092, China
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Gonçalves TP, Dutta I, Huang KW. Aromaticity in catalysis: metal ligand cooperation via ligand dearomatization and rearomatization. Chem Commun (Camb) 2021; 57:3070-3082. [PMID: 33656025 DOI: 10.1039/d1cc00528f] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Unlike the conventional model of transition metal catalysis, ligands in metal-ligand cooperative (or bifunctional) catalysis are involved in the substrate activations. Such processes have offered unique mechanistic understandings and led to new concepts for the catalyst design. In particular, unprecedented activities were discovered when the ligand could undergo dearomatization-rearomatization reactions during the catalytic cycle. Aromatization can provide an extra driving force to thermodynamics; consequently, it brings a new perspective to ligand platform design for catalysis. While numerous applications were demonstrated, the influences of changing ligand aromatic properties were often overlooked. In this article, representative ligand systems will be highlighted and a comparison between the Milstein and the Huang pincer systems will be discussed to provide theoretical and conceptual insights.
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Affiliation(s)
- Théo P Gonçalves
- KAUST Catalysis Center and Division of Physical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal 23955-6900, Saudi Arabia.
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Herbay R, Bagi P, Mucsi Z, Mátravölgyi B, Drahos L, Fogassy E, Keglevich G. A novel preparation of chlorophospholenium chlorides and their application in the synthesis of phospholene boranes. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2016.12.059] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Faigl F, Deák S, Mucsi Z, Hergert T, Balázs L, Sándor B, Balázs B, Holczbauer T, Nyerges M, Mátravölgyi B. A novel and convenient method for the preparation of 5-(diphenylmethylene)-1 H -pyrrol-2(5 H )-ones; synthesis and mechanistic study. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.07.032] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Molecular Targets of β-Lactam-Based Antimicrobials: Beyond the Usual Suspects. Antibiotics (Basel) 2014; 3:128-42. [PMID: 27025739 PMCID: PMC4790389 DOI: 10.3390/antibiotics3020128] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2013] [Revised: 02/24/2014] [Accepted: 02/25/2014] [Indexed: 12/20/2022] Open
Abstract
The common practice in antibacterial drug development has been to rapidly make an attempt to find ever-more stable and broad-spectrum variants for a particular antibiotic, once a drug resistance for that antibiotic is detected. We are now facing bacterial resistance toward our clinically relevant antibiotics of such a magnitude that the conversation for antimicrobial drug development ought to include effective new antibiotics with alternative mechanisms of action. The electrophilic β-lactam ring is amenable for the inhibition of different enzyme classes by a suitable decoration of the core scaffold. Monocyclic β-lactams lacking an ionizable group at the lactam nitrogen exhibit target preferences toward bacterial enzymes important for resistance and virulence. The present review intends to draw attention to the versatility of the β-lactams as antimicrobials with "unusual" molecular targets.
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Kita Y, Nishii Y, Onoue A, Mashima K. Combined Catalytic System of Scandium Triflate and Boronic Ester for Amide Bond Cleavage. Adv Synth Catal 2013. [DOI: 10.1002/adsc.201300819] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Mucsi Z, Chass GA, Ábrányi-Balogh P, Jójárt B, Fang DC, Ramirez-Cuesta AJ, Viskolcz B, Csizmadia IG. Penicillin's catalytic mechanism revealed by inelastic neutrons and quantum chemical theory. Phys Chem Chem Phys 2013; 15:20447-20455. [DOI: 10.1039/c3cp50868d] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Penicillin's dynamic structure–activity relationship resolved by inelastic neutrons kinetics, NMR and QM/MM-theory. Self-activating geometric changes catalyse bacterial enzyme inactivation.
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Affiliation(s)
- Zoltán Mucsi
- Department of Chemistry
- University of Toronto
- Toronto
- Canada
| | - Gregory A. Chass
- School of Biological and Chemical Sciences
- Queen Mary University of London
- London
- UK
| | | | - Balázs Jójárt
- Department of Chemical Informatics University of Szeged
- Szeged
- Hungary
| | - De-Cai Fang
- College of Chemistry
- Beijing Normal University
- Beijing
- China
| | | | - Béla Viskolcz
- Department of Chemical Informatics University of Szeged
- Szeged
- Hungary
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Mucsi Z, Porcs-Makkay M, Simig G, Csizmadia IG, Volk B. Application of the systems chemistry approach on the ammonolysis of 1-ethoxycarbonyl- and 1-phenoxycarbonyl-3-(2-thienyl)oxindoles. A method to predict reactivity. J Org Chem 2012; 77:7282-90. [PMID: 22901033 DOI: 10.1021/jo300715d] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The routine prediction of the reactivity of a complex, multifunctional molecule is a challenging and time-consuming procedure. In the last step of the synthesis of the well-known drug substance tenidap, a nonexpected difference was observed between the reactivities of two closely related carbamate moieties, the N-ethoxycarbonyl and the N-phenoxycarbonyl group. A detailed kinetic study, necessitating a significant computational effort, is described in the present paper for this reaction step. On the other hand, the systems chemistry concept, by analyzing the details of the electronic structure and the connections between functional groups in a fast and simple way, is also able to answer this question using various "-icity" parameters (aromaticity, carbonylicity, olefinicity). The complete systems chemistry approach involves all these conjugativicity parameters, while its further simplified version is based on only one key parameter, which is carbonylicity in the present case. The above methods were compared in terms of their predictive power. The results show that the systems chemistry concept, even its one-parameter version, is applicable for the characterization of this challenging reactivity issue.
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Affiliation(s)
- Zoltán Mucsi
- Department of Chemistry and Chemical Informatics, Faculty of Education, University of Szeged, H-6722 Szeged, Hungary.
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Glover SA, Rosser AA. Reliable Determination of Amidicity in Acyclic Amides and Lactams. J Org Chem 2012; 77:5492-502. [DOI: 10.1021/jo300347k] [Citation(s) in RCA: 90] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Stephen A. Glover
- Department of Chemistry, School of
Science and Technology, University of New England, Armidale, NSW 2351, Australia
| | - Adam A. Rosser
- Department of Chemistry, School of
Science and Technology, University of New England, Armidale, NSW 2351, Australia
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Disulfidicity: A scale to characterize the disulfide bond strength via the hydrogenation thermodynamics. Chem Phys Lett 2012. [DOI: 10.1016/j.cplett.2012.05.017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Glover SA, White JM, Rosser AA, Digianantonio KM. Structures ofN,N-Dialkoxyamides: Pyramidal Anomeric Amides with Low Amidicity. J Org Chem 2011; 76:9757-63. [DOI: 10.1021/jo201856u] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Stephen A. Glover
- Department of Chemistry, School of Science and Technology, University of New England, Armidale, NSW 2351, Australia
| | - Jonathan M. White
- School of Chemistry and Bio-21 Institute, University of Melbourne, Parkville, Vic 3010, Australia
| | - Adam A. Rosser
- Department of Chemistry, School of Science and Technology, University of New England, Armidale, NSW 2351, Australia
| | - Katherine M. Digianantonio
- Department of Chemistry, School of Science and Technology, University of New England, Armidale, NSW 2351, Australia
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A computational study of glutathione and its fragments: N-acetylcisteinylglycine and γ-glutamylmethylamide. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.03.067] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Shiroudi A, Zahedi E, Zabihi R. Control aromaticity in the thermal decomposition of 2,5-dihydrofuran, 2,5-dihydrothiophene and 3-pyrroline: a kinetic and thermodynamic study via DFT. REACTION KINETICS MECHANISMS AND CATALYSIS 2010. [DOI: 10.1007/s11144-010-0254-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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