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Song G, Lee S, Jeong KS. Complexation-driven assembly of imine-linked helical receptors showing adaptive folding and temperature-dependent guest selection. Nat Commun 2024; 15:1501. [PMID: 38374171 PMCID: PMC10876968 DOI: 10.1038/s41467-024-45322-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Accepted: 01/22/2024] [Indexed: 02/21/2024] Open
Abstract
The development of synthetic receptors capable of selectively binding guests with diverse structures and multiple functional groups poses a significant challenge. Here, we present the efficient assembly of foldamer-based receptors for monosaccharides, utilising the principles of complexation-induced equilibrium shifting and adaptive folding. Diimine 4 can be quantitatively assembled from smaller components when D-galactose is added as a guest among monosaccharides we examined. During this assembly, dual complexation-induced equilibrium shifts toward both the formation of diimine 4 and the conversion of D-galactose into α-D-galactofuranose are observed. Diimine 6 is quantitatively assembled in the presence of two different guests, methyl β-D-glucopyranoside and methyl β-D-galactopyranoside, resulting in the formation of two dimeric complexes: (6-MP)2⊃(methyl β-D-glucopyranoside)2 and (6-MM)2⊃(methyl β-D-galactopyranoside∙2H2O)2, respectively. These two complexes exhibit distinct folding structures with domain-swapping cavities depending on the bound guest and temperature. Interestingly, (6-MM)2⊃(methyl β-D-galactopyranoside∙2H2O)2 is exclusively formed at lower temperatures, while (6-MP)2⊃(methyl β-D-glucopyranoside)2 is only formed at higher temperatures.
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Affiliation(s)
- Geunmoo Song
- Department of Chemistry, Yonsei University, Seoul, 03722, South Korea
| | - Seungwon Lee
- Department of Chemistry, Yonsei University, Seoul, 03722, South Korea
| | - Kyu-Sung Jeong
- Department of Chemistry, Yonsei University, Seoul, 03722, South Korea.
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Martí-Centelles V, Pandey MD, Burguete MI, Luis SV. Macrocyclization Reactions: The Importance of Conformational, Configurational, and Template-Induced Preorganization. Chem Rev 2015; 115:8736-834. [DOI: 10.1021/acs.chemrev.5b00056] [Citation(s) in RCA: 278] [Impact Index Per Article: 30.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
| | - Mrituanjay D. Pandey
- Departament de Química
Inorgànica i Orgànica, Universitat Jaume I, 12071 Castelló, Spain
| | - M. Isabel Burguete
- Departament de Química
Inorgànica i Orgànica, Universitat Jaume I, 12071 Castelló, Spain
| | - Santiago V. Luis
- Departament de Química
Inorgànica i Orgànica, Universitat Jaume I, 12071 Castelló, Spain
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Angurell I, Ferrer M, Gutiérrez A, Martínez M, Rocamora M, Rodríguez L, Rossell O, Lorenz Y, Engeser M. Kinetico-Mechanistic Insights on the Assembling Dynamics of Allyl-Cornered Metallacycles: The PtNpyBond is the Keystone. Chemistry 2014; 20:14473-87. [DOI: 10.1002/chem.201403467] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2014] [Indexed: 11/09/2022]
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Adriaenssens L, Gil-Ramírez G, Frontera A, Quiñonero D, Escudero-Adán EC, Ballester P. Thermodynamic Characterization of Halide−π Interactions in Solution Using “Two-Wall” Aryl Extended Calix[4]pyrroles as Model System. J Am Chem Soc 2014; 136:3208-18. [DOI: 10.1021/ja412098v] [Citation(s) in RCA: 87] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Louis Adriaenssens
- Institute of Chemical Research of Catalonia (ICIQ), Avgda Països Catalans 16, 43007 Tarragona, Spain
| | - Guzmán Gil-Ramírez
- Institute of Chemical Research of Catalonia (ICIQ), Avgda Països Catalans 16, 43007 Tarragona, Spain
| | - Antonio Frontera
- Departament
de Química, Universitat de les Illes Balears, Crta Valldemossa
Km 7.5, 07122 Palma, Spain
| | - David Quiñonero
- Departament
de Química, Universitat de les Illes Balears, Crta Valldemossa
Km 7.5, 07122 Palma, Spain
| | - Eduardo C. Escudero-Adán
- Institute of Chemical Research of Catalonia (ICIQ), Avgda Països Catalans 16, 43007 Tarragona, Spain
| | - Pablo Ballester
- Institute of Chemical Research of Catalonia (ICIQ), Avgda Països Catalans 16, 43007 Tarragona, Spain
- Catalan
Institution for Research and Advanced Studies (ICREA), Passeig Lluís Companys 23, 08010 Barcelona, Spain
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Hogben HJ, Sprafke JK, Hoffmann M, Pawlicki M, Anderson HL. Stepwise Effective Molarities in Porphyrin Oligomer Complexes: Preorganization Results in Exceptionally Strong Chelate Cooperativity. J Am Chem Soc 2011; 133:20962-9. [DOI: 10.1021/ja209254r] [Citation(s) in RCA: 90] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Hannah J. Hogben
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Johannes K. Sprafke
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Markus Hoffmann
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Miłosz Pawlicki
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Harry L. Anderson
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, United Kingdom
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Brahma S, Asif Ikbal S, Rath SP. Syn–anti conformational switching: Synthesis and X-ray structures of tweezer and anti form in a zinc porphyrin dimer induced by axial ligands. Inorganica Chim Acta 2011. [DOI: 10.1016/j.ica.2011.01.101] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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8
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Falconer RJ, Collins BM. Survey of the year 2009: applications of isothermal titration calorimetry. J Mol Recognit 2010; 24:1-16. [DOI: 10.1002/jmr.1073] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Klein A, Lüning A, Ott I, Hamel L, Neugebauer M, Butsch K, Lingen V, Heinrich F, Elmas S. Organometallic palladium and platinum complexes with strongly donating alkyl coligands – Synthesis, structures, chemical and cytotoxic properties. J Organomet Chem 2010. [DOI: 10.1016/j.jorganchem.2010.04.027] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Lemonnier JF, Guénée L, Bernardinelli G, Vigier JF, Bocquet B, Piguet C. Planned Failures from the Principle of Maximum Site Occupancy in Lanthanide Helicates. Inorg Chem 2010; 49:1252-65. [DOI: 10.1021/ic902314f] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jean-François Lemonnier
- Department of Inorganic, Analytical and Applied Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland
| | - Laure Guénée
- Department of Inorganic, Analytical and Applied Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland
| | - Gérald Bernardinelli
- Laboratory of Crystallography, University of Geneva, 24 quai E. Ansermet, CH-1211 Geneva 4, Switzerland
| | - Jean-François Vigier
- Department of Inorganic, Analytical and Applied Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland
| | - Bernard Bocquet
- Department of Inorganic, Analytical and Applied Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland
| | - Claude Piguet
- Department of Inorganic, Analytical and Applied Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland
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