1
|
Sukpattanacharoen C, Kungwan N. Theoretical insights of solvent effect on excited-state proton transfers of 2-aryl-3-hydroxyquinolone. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2020.115035] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
|
2
|
Yi J, Fang H. Effect of water on excited‐state double proton transfer in 7‐azaindole‐H
2
O complex: A theoretical study. J PHYS ORG CHEM 2020. [DOI: 10.1002/poc.4060] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Jiacheng Yi
- Department of Chemistry and Material Science, College of ScienceNanjing Forestry University Nanjing China
| | - Hua Fang
- Department of Chemistry and Material Science, College of ScienceNanjing Forestry University Nanjing China
| |
Collapse
|
3
|
Fang H. Halogen substituent effect on the water-assisted excited-state tautomerization of 2, 7-diazaindole-H 2O complex in aqueous solution: A theoretical study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2019; 214:152-160. [PMID: 30776716 DOI: 10.1016/j.saa.2019.02.016] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2018] [Revised: 01/18/2019] [Accepted: 02/10/2019] [Indexed: 06/09/2023]
Abstract
We studied the ESPT process in the 2-DAI-H2O complex theoretically for the first time, and compared the kinetics of 2-DAI-H2O with those features of 7-DAI-H2O. The substituted effect on the dynamics of excited-state double proton transfer in 2-DAI-H2O and 7-DAI-H2O clusters in water were also investigated at the TD-M06-2X/6-311+G(d, p) level. In this work, 2,7-DAI-H2O is also expressed as 2-DAI-H2O and 7-DAI-H2O, in which correspond to different ESPT reactions and generate two tautomers (N2H form and N7H form). In both the 2-DAI-H2O and 7-DAI-H2O complexes, ESPT processes happened in a concertedly but asynchronously protolysis pathway. The ESPT process preferred to occur in the 7-DAI-H2O complex due to its lower barrier height. For the 3-X-2-DAI-H2O and 3-X-7-DAI-H2O (X = H, F, Cl, Br) complexes, the replacement of halogen atom did not influence the ESPT mechanism. However, the replacement of halogen atom changed the structural parameters evidently, reduced the barrier height up to 4-5 kcal/mol, and enlarged the asynchronicity of ESPT apparently. ∆(R1+R2) values in the 3X-2-DAI-H2O and 3X-7-DAI-H2O complexes have linear correlation to the ZPE-corrected ESPT barrier height linearly.
Collapse
Affiliation(s)
- Hua Fang
- Department of Chemistry and Material Science, College of Science, Nanjing Forestry University, Nanjing 210037, People's Republic of China.
| |
Collapse
|
4
|
Yi J, Fang H. Effect of different alkyl groups on excited-state tautomerization of 7AI-azaindole-H 2O: A theoretical study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 202:58-64. [PMID: 29777935 DOI: 10.1016/j.saa.2018.05.037] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2017] [Revised: 04/21/2018] [Accepted: 05/09/2018] [Indexed: 06/08/2023]
Abstract
The effect of substituted alkyl groups at different substituted position on the first excited-state proton transfer of nR7AI-H2O (n = 2-6; R = CH3, C2H5, CF3) complexes were theoretically investigated at the TD-M06-2X/6-31 + G(d, p) level. Here n value denoted the substituted position Cn of R group. The replacement of alkyl R group had no effect on the features of HOMO and LUMO, but influenced the S0 → S1 adiabatic transition energies of the nR7AI-H2O complex. Through computation, we found that the double proton transfer took place in a concerted but asynchronous protolysis pattern regardless of substituted group R and substituted position in the nR7AI-H2O complex. The vibrational-mode specific nature of ESPT was verified. The alkyl group R changed the geometrical parameters of TS, and resulted in enlarging/narrowing the asynchronousity of ESPT. The ESPT barrier height was also affected by the substituted group and position.
Collapse
Affiliation(s)
- Jiacheng Yi
- Department of Chemistry and Material Science, College of Science, Nanjing Forestry University, Nanjing 210037, People's Republic of China
| | - Hua Fang
- Department of Chemistry and Material Science, College of Science, Nanjing Forestry University, Nanjing 210037, People's Republic of China.
| |
Collapse
|
5
|
Theoretical study on the substituent effect of halogen atom at different position of 7-azaindole-water derivatives: relative stability and excited-state proton-transfer mechanism. Struct Chem 2018. [DOI: 10.1007/s11224-018-1119-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
6
|
Yi J, Fang H. Theoretical Study on the Substituent Effect on the Excited-State Proton Transfer in the 7-Azaindole-Water Derivatives. Photochem Photobiol 2017; 94:27-35. [DOI: 10.1111/php.12839] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2017] [Accepted: 08/21/2017] [Indexed: 11/27/2022]
Affiliation(s)
- Jiacheng Yi
- Department of Chemistry and Material Science; College of Science; Nanjing Forestry University; Nanjing Jiangsu China
| | - Hua Fang
- Department of Chemistry and Material Science; College of Science; Nanjing Forestry University; Nanjing Jiangsu China
| |
Collapse
|
7
|
Yi J, Fang H. Theoretical investigation on the water-assisted excited-state proton transfer of 7-azaindole derivatives: substituent effect. J Mol Model 2017; 23:312. [DOI: 10.1007/s00894-017-3487-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Accepted: 09/25/2017] [Indexed: 11/28/2022]
|
8
|
Bao JL, Truhlar DG. Variational transition state theory: theoretical framework and recent developments. Chem Soc Rev 2017; 46:7548-7596. [DOI: 10.1039/c7cs00602k] [Citation(s) in RCA: 207] [Impact Index Per Article: 29.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
This article reviews the fundamentals of variational transition state theory (VTST), its recent theoretical development, and some modern applications.
Collapse
Affiliation(s)
- Junwei Lucas Bao
- Department of Chemistry
- Chemical Theory Center, and Minnesota Supercomputing Institute
- University of Minnesota
- Minneapolis
- USA
| | - Donald G. Truhlar
- Department of Chemistry
- Chemical Theory Center, and Minnesota Supercomputing Institute
- University of Minnesota
- Minneapolis
- USA
| |
Collapse
|
9
|
Theoretical Modeling of Vibrational Spectra and Proton Tunneling in Hydrogen-Bonded Systems. ADVANCES IN CHEMICAL PHYSICS 2016. [DOI: 10.1002/9781119165156.ch6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
|
10
|
Machrafi H, Lebon G. Effective Thermal Conductivity of Spherical Particulate Nanocomposites: Comparison with Theoretical Models, Monte Carlo Simulations and Experiments. INTERNATIONAL JOURNAL OF NANOSCIENCE 2014. [DOI: 10.1142/s0219581x14500227] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The purpose of this work is to study heat conduction in systems that are composed out of spherical micro-and nanoparticles dispersed in a bulk matrix. Special emphasis will be put on the dependence of the effective heat conductivity on various selected parameters as dimension and density of particles, interface interaction with the matrix. This is achieved by combining the effective medium approximation and extended irreversible thermodynamics, whose main feature is to elevate the heat flux vector to the status of independent variable. The model is illustrated by three examples: Silicium-Germanium, Silica-epoxy-resin and Copper-Silicium systems. Predictions of our model are in good agreement with other theoretical models, Monte-Carlo simulations and experimental data.
Collapse
Affiliation(s)
- Hatim Machrafi
- Thermodynamics of Irreversible Phenomena, University of Liège, Allée du 6-Août, 17 Liège, 4000, Belgium
| | - Georgy Lebon
- Thermodynamics of Irreversible Phenomena, University of Liège, Allée du 6-Août, 17 Liège, 4000, Belgium
| |
Collapse
|
11
|
Kungwan N, Kerdpol K, Daengngern R, Hannongbua S, Barbatti M. Effects of the second hydration shell on excited-state multiple proton transfer: dynamics simulations of 7-azaindole:(H2O)1–5 clusters in the gas phase. Theor Chem Acc 2014. [DOI: 10.1007/s00214-014-1480-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
12
|
Daengngern R, Kerdpol K, Kungwan N, Hannongbua S, Barbatti M. Dynamics simulations of excited-state triple proton transfer in 7-azaindole complexes with water, water–methanol and methanol. J Photochem Photobiol A Chem 2013. [DOI: 10.1016/j.jphotochem.2013.05.012] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
13
|
Mai BK, Park K, Duong MPT, Kim Y. Proton Transfer Dependence on Hydrogen-Bonding of Solvent to the Water Wire: A Theoretical Study. J Phys Chem B 2012; 117:307-15. [DOI: 10.1021/jp310724g] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Binh Khanh Mai
- Department
of Applied Chemistry, Kyung Hee University, 1 Seochun-Dong,
Giheung-Gu, Yongin-Si, Gyeonggi-Do, 446-701, Korea
| | - Kisoo Park
- Department
of Applied Chemistry, Kyung Hee University, 1 Seochun-Dong,
Giheung-Gu, Yongin-Si, Gyeonggi-Do, 446-701, Korea
| | - My Phu Thi Duong
- Department
of Applied Chemistry, Kyung Hee University, 1 Seochun-Dong,
Giheung-Gu, Yongin-Si, Gyeonggi-Do, 446-701, Korea
| | - Yongho Kim
- Department
of Applied Chemistry, Kyung Hee University, 1 Seochun-Dong,
Giheung-Gu, Yongin-Si, Gyeonggi-Do, 446-701, Korea
| |
Collapse
|
14
|
Yu XF, Yamazaki S, Taketsugu T. Theoretical Study on Water-Mediated Excited-State Multiple Proton Transfer in 7-Azaindole: Significance of Hydrogen Bond Rearrangement. J Phys Chem A 2012; 116:10566-73. [DOI: 10.1021/jp308535h] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xue-fang Yu
- Department of Chemistry, Faculty
of Science, Hokkaido University, Sapporo
060-0810, Japan
| | - Shohei Yamazaki
- Department of Chemistry, Faculty
of Science, Hokkaido University, Sapporo
060-0810, Japan
| | - Tetsuya Taketsugu
- Department of Chemistry, Faculty
of Science, Hokkaido University, Sapporo
060-0810, Japan
| |
Collapse
|
15
|
Fang H, Kim Y. Solvent effects in the excited-state tautomerization of 7-azaindole: a theoretical study. J Phys Chem B 2011; 115:15048-58. [PMID: 22074681 DOI: 10.1021/jp208969b] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The solvent effect often changes the mechanism of a chemical reaction. Experimental studies of the excited-state tautomerization of 7-azaindole (7AI) suggested that the intrinsic reactions occur via the concerted triple and double proton transfer mechanisms in the gas and liquid phases, respectively. Theoretical study is required to understand how the solvent effect changes the mechanism; however, such studies have rarely been performed in the excited-state. In this study, systematic quantum mechanical calculations were performed to study the excited-state tautomerization of 7AI in methanol. Electronic structures and energies for the reactant, transition state, and product were computed at the complete active space self-consistent field levels with the second-order multireference perturbation theory (MRPT2) to consider the dynamic electron correlation. The IEFPCM and SM8 methods were used to include solvent effect in the excited and ground-state calculations, respectively. The excited-state double proton transfer (ESDPT) in 7AI-CH(3)OH and the triple proton transfer (ESTPT) in 7AI-(CH(3)OH)(2) both occur via a concerted but asynchronous mechanism. The ESTPT barrier was smaller than the activation energy of solvent reorganization; however, the amount of 7AI-(CH(3)OH)(2) in methanol is very small because the complex formation is entropically very unfavorable. Therefore, the ESTPT is not an important path. The MRPT2 barrier of ESDPT was 2.8 kcal/mol, which agrees very well with the experimental value. The MRPT2 barrier of deuterium (D) transfer is larger than the activation energy of solvent reorganization; therefore, the intrinsic D transfer is rate-limiting, while the proton transfer must compete with solvent reorganization. The time-dependent density functional theory (TDDFT) was also used for comparison. Most TDDFT methods used in this study failed to predict transition state structures or barriers of the excited-state tautomerization. Additionally, the TDDFT levels failed to predict correct dipole moments in the excited-state, which produced an unreliable solvent effect on barrier heights.
Collapse
Affiliation(s)
- Hua Fang
- Department of Applied Chemistry, Kyung Hee University, Giheung-Gu, Yongin-Si, Gyeonggi-Do, Korea
| | | |
Collapse
|
16
|
Daengngern R, Kungwan N, Wolschann P, Aquino AJA, Lischka H, Barbatti M. Excited-State Intermolecular Proton Transfer Reactions of 7-Azaindole(MeOH)n (n = 1–3) Clusters in the Gas phase: On-the-Fly Dynamics Simulation. J Phys Chem A 2011; 115:14129-36. [DOI: 10.1021/jp2059936] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Rathawat Daengngern
- Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Nawee Kungwan
- Department of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
- Materials Science Research Center, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Peter Wolschann
- Institute for Theoretical Chemistry, University of Vienna, Währingerstrasse 17, A-1090 Vienna, Austria
| | - Adélia J. A. Aquino
- Institute for Theoretical Chemistry, University of Vienna, Währingerstrasse 17, A-1090 Vienna, Austria
| | - Hans Lischka
- Institute for Theoretical Chemistry, University of Vienna, Währingerstrasse 17, A-1090 Vienna, Austria
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas 79409-1061, United States
| | - Mario Barbatti
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470, Mülheim an der Ruhr, Germany
| |
Collapse
|
17
|
Fang H, Kim Y. Theoretical Studies for Excited-State Tautomerization in the 7-Azaindole–(CH3OH)n (n = 1 and 2) Complexes in the Gas Phase. J Phys Chem A 2011; 115:13743-52. [DOI: 10.1021/jp207701r] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Hua Fang
- Department of Applied Chemistry, Kyung Hee University, 1 Seochun-Dong, Giheung-Gu, Yongin-Si, Gyeonggi-Do 446-701, Korea
| | - Yongho Kim
- Department of Applied Chemistry, Kyung Hee University, 1 Seochun-Dong, Giheung-Gu, Yongin-Si, Gyeonggi-Do 446-701, Korea
| |
Collapse
|
18
|
Young JW, Pratt DW. Excited state electron transfer precedes proton transfer following irradiation of the hydrogen-bonded single water complex of 7-azaindole with UV light. J Chem Phys 2011; 135:084301. [DOI: 10.1063/1.3626408] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|
19
|
Park SY, Jeong H, Jang DJ. Anomalously Slow Proton Transport of a Water Molecule. J Phys Chem B 2011; 115:6023-31. [DOI: 10.1021/jp112210x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Sun-Young Park
- School of Chemistry, Seoul National University, NS60, Seoul 151-742, Korea
| | - Hyeok Jeong
- School of Chemistry, Seoul National University, NS60, Seoul 151-742, Korea
| | - Du-Jeon Jang
- School of Chemistry, Seoul National University, NS60, Seoul 151-742, Korea
| |
Collapse
|
20
|
Mori Y, Takano K. Reaction mechanism of di-π-methane rearrangement of 4-phenyl-4H-pyran: A CASSCF/MRMP2 study. J Photochem Photobiol A Chem 2011. [DOI: 10.1016/j.jphotochem.2011.03.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
21
|
Fang H, Kim Y. Excited-State Tautomerization in the 7-Azaindole-(H2O)n (n = 1 and 2) Complexes in the Gas Phase and in Solution: A Theoretical Study. J Chem Theory Comput 2011; 7:642-57. [DOI: 10.1021/ct100647b] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hua Fang
- Department of Chemistry, Kyung Hee University, 1 Seochun-Dong, Giheung-Gu, Yongin-Si, Gyeonggi-Do, 446-701, Korea
| | - Yongho Kim
- Department of Chemistry, Kyung Hee University, 1 Seochun-Dong, Giheung-Gu, Yongin-Si, Gyeonggi-Do, 446-701, Korea
| |
Collapse
|