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Heller J, Ončák M, Bersenkowitsch NK, van der Linde C, Beyer MK. Infrared multiple photon dissociation of cesium iodide clusters doped with mono-, di- and triglycine. EUROPEAN JOURNAL OF MASS SPECTROMETRY (CHICHESTER, ENGLAND) 2019; 25:122-132. [PMID: 30284923 PMCID: PMC7100558 DOI: 10.1177/1469066718803307] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Charged cesium iodide clusters doped with mono-, di- and triglycine serve as a model system for sea salt aerosols containing biological molecules. Here, we investigate reactions of these complexes under infrared irradiation, with spectra obtained by infrared multiple photon dissociation. The cluster ions are generated via electrospray ionization and analyzed in the cell of a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer. Depending on the cluster size and peptide length, loss of HI or loss of a glycine unit is observed. The experimental measurements are supported by quantum chemical calculations. We show that N-H and O-H stretching modes dominate the spectrum, with large shifts depending on local interactions, namely due to interaction with iodide anions or intramolecular hydrogen bonding. Both experiment and theory indicate that several isomers are present in the experimental mixture, with different infrared fingerprints as well as dissociation pathways.
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Affiliation(s)
- Jakob Heller
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Innsbruck, Austria
| | - Milan Ončák
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Innsbruck, Austria
| | - Nina K Bersenkowitsch
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Innsbruck, Austria
| | | | - Martin K Beyer
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Innsbruck, Austria
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Bersenkowitsch NK, Ončák M, Heller J, van der Linde C, Beyer MK. Photodissociation of Sodium Iodide Clusters Doped with Small Hydrocarbons. Chemistry 2018; 24:12433-12443. [PMID: 29979470 PMCID: PMC6120481 DOI: 10.1002/chem.201803017] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Indexed: 11/07/2022]
Abstract
Marine aerosols consist of a variety of compounds and play an important role in many atmospheric processes. In the present study, sodium iodide clusters with their simple isotope pattern serve as model systems for laboratory studies to investigate the role of iodide in the photochemical processing of sea-salt aerosols. Salt clusters doped with camphor, formate and pyruvate are studied in a Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) coupled to a tunable laser system in both UV and IR range. The analysis is supported by ab initio calculations of absorption spectra and energetics of dissociative channels. We provide quantitative analysis of IRMPD measurements by reconstructing one-photon spectra and comparing them with the calculated ones. While neutral camphor is adsorbed on the cluster surface, the formate and pyruvate ions replace an iodide ion. The photodissociation spectra revealed several wavelength-specific fragmentation pathways, including the carbon dioxide radical anion formed by photolysis of pyruvate. Camphor and pyruvate doped clusters absorb in the spectral region above 290 nm, which is relevant for tropospheric photochemistry, leading to internal conversion followed by intramolecular vibrational redistribution, which leads to decomposition of the cluster. Potential photodissociation products of pyruvate in the actinic region may be formed with a cross section of <2×10-20 cm2 , determined by the experimental noise level.
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Affiliation(s)
- Nina K. Bersenkowitsch
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckAustria
| | - Milan Ončák
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckAustria
| | - Jakob Heller
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckAustria
| | - Christian van der Linde
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckAustria
| | - Martin K. Beyer
- Institut für Ionenphysik und Angewandte PhysikUniversität InnsbruckTechnikerstraße 256020InnsbruckAustria
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3
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Bashir S, Liu JL, Derrick PJ. Effect of Structured Surfaces on MALDI Analyte Peak Intensities. Aust J Chem 2017. [DOI: 10.1071/ch17456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
A surface modification method is presented: a sodium chloride crystal, a transparent wide bandgap insulator, was deposited onto a stainless steel surface. The surface was subjected to various stimuli to induce surface defects either on the steel surface or salt crystal and the ion yield of substance P, a model peptide, was investigated as a function of stimuli. The interaction of the laser at potential defect sites resulted in an increase in the ion yield of substance P (3–17 fold increase relative to no stimuli).
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Liu CW, Hou GL, Zheng WJ, Gao YQ. Adsorption of water molecules on sodium chloride trimer. Theor Chem Acc 2014. [DOI: 10.1007/s00214-014-1550-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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5
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Klimeš J, Bowler DR, Michaelides A. Understanding the role of ions and water molecules in the NaCl dissolution process. J Chem Phys 2013; 139:234702. [DOI: 10.1063/1.4840675] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
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Bradshaw JA, Gordon SL, Leavitt AJ, Whetten RL. Adsorption of Water Molecules on Selected Charged Sodium–Chloride Clusters. J Phys Chem A 2011; 116:27-36. [DOI: 10.1021/jp206433r] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- James A. Bradshaw
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, United States
| | - Sidney L. Gordon
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, United States
| | - Andrew J. Leavitt
- Department of Chemistry, North Georgia College and State University, Dahlonega, Georgia, United States
| | - Robert L. Whetten
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, United States
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7
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Liu LM, Laio A, Michaelides A. Initial stages of salt crystal dissolution determined with ab initio molecular dynamics. Phys Chem Chem Phys 2011; 13:13162-6. [DOI: 10.1039/c1cp21077g] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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9
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Osuna SÃ, Swart M, Baerends EJ, Bickelhaupt FM, Solà M. Homolytic versus Heterolytic Dissociation of Alkalimetal Halides: The Effect of Microsolvation. Chemphyschem 2009; 10:2955-65. [DOI: 10.1002/cphc.200900480] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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10
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Nahtigal IG, Svishchev IM. Generation and Integration of NaOH into NaCl Clusters in Supercritical Water: A Molecular Dynamics Study on Hydrolysis Product Partitioning. J Phys Chem B 2009; 113:14681-8. [DOI: 10.1021/jp9039572] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Istok G. Nahtigal
- Department of Chemistry, Trent University, Peterborough, ON, Canada K9J 7B8
| | - Igor M. Svishchev
- Department of Chemistry, Trent University, Peterborough, ON, Canada K9J 7B8
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11
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Panja S, Hvelplund P, Nielsen SB, Uggerud E. The reduction of water clusters H+(H2O)n to (OH-)(H2O)m by double electron transfer from Cs atoms. Phys Chem Chem Phys 2009; 11:6125-31. [PMID: 19606322 DOI: 10.1039/b903517f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
(H(+))(H(2)O)(n) ions (n = 1-72) at 50 keV energies were brought to collide with caesium atoms. The analysis of the products formed for clusters having n > 4 shows that this leads to the formation of a population of (OH(-))(H(2)O)(m) ions with a variable number m. On average, more than half of the water molecules are lost from the cluster in the process. A model can explain the experimental observations where two successive collisions occur within a time period of less than 100 ns. One-electron transfer from caesium to water leading to the loss of one hydrogen atom occurs at each stage. While the first stage is by itself exothermic, the second stage requires additional energy from collisional energy transfer.
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Affiliation(s)
- Subhais Panja
- Department of Physics and Astronomy, University of Aarhus, Ny Munkegade, DK-8000 Aarhus C, Denmark
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12
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Liu LM, Krack M, Michaelides A. Interfacial water: A first principles molecular dynamics study of a nanoscale water film on salt. J Chem Phys 2009; 130:234702. [DOI: 10.1063/1.3152845] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
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Singh M. Critical Solution Temperatures for Two Phase Solvent Systems with Halide Salts, Carboxylic Acids, Surfactants, and Polynuclear Aromatic Compounds. J DISPER SCI TECHNOL 2007. [DOI: 10.1080/01932690701282526] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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14
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Feiden P, Leygnier J, Cahuzac P, Bréchignac C. Impurity driven clustering in a gas aggregation source. Chem Phys Lett 2006. [DOI: 10.1016/j.cplett.2006.10.075] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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15
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Olleta AC, Lee HM, Kim KS. Ab initio study of hydrated sodium halides NaX(H2O)1–6 (X=F, Cl, Br, and I). J Chem Phys 2006; 124:024321. [PMID: 16422597 DOI: 10.1063/1.2147283] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We have studied the dissociation phenomena of sodium halides by water molecules. The structures, binding energies, electronic properties, and IR spectroscopic features have been investigated by using the density-functional theory, second-order Moller-Plesset perturbation theory, and coupled clusters theory with single, double, and perturbative triplet excitations. In the case that the sodium halides are hydrated by three water molecules, the most stable structures show the partial (or half) dissociation feature. The dissociated structures are first found for NaX(H2O)(n=5) for X=BrI, though these structures are slightly higher in energy than the global minimum-energy structure. In the case of hexahydrated sodium halides the global minimum-energy structures (which are different from the structures reported in any previous work) are found to be dissociated (X=F/I) or partially/half dissociated (X=Cl/Br), while other nearly isoenergetic structures are undissociated, and the dissociated cubical structures are higher in energy than the corresponding global minimum-energy structure.
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Affiliation(s)
- Adriana C Olleta
- National Creative Research Initiative Center for Superfunctional Materials, Department of Chemistry, Division of Molecular and Life Sciences, Pohang University of Science and Technology, San 31, Hyojadong, Namgu, Pohang 790-784, Korea
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Misaizu F, Tsuruta M, Tsunoyama H, Furuya A, Ohno K, Lintuluoto M. Size-dependent structures of NanIn−1+ cluster ions with a methanol adsorbate: A combined study by photodissociation spectroscopy and density-functional theory calculation. J Chem Phys 2005; 123:161101. [PMID: 16268670 DOI: 10.1063/1.2102909] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Methanol adsorption sites on NanI+n-1 ions were investigated. Photoexcitation to charge-transfer states of NanI+n-1 (methanol) predominantly produces two fragment ions: Nan-1I+n-2 (methanol) (neutral NaI loss) and Nan-1I+n-2(neutral NaI and methanol loss), without forming NanI+n-1 (methanol loss). The relative intensities of these fragments are correlated with the geometries and binding energies.
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Affiliation(s)
- Fuminori Misaizu
- Department of Chemistry, Graduate School of Science, Tohoku University, Aramaki, Aoba-ku, Sendai 980-8578, Japan.
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Müller IB, Cederbaum LS, Tarantelli F. Microsolvation of Li+ in Water Analyzed by Ionization and Double Ionization. J Phys Chem A 2004. [DOI: 10.1021/jp0492826] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Imke B. Müller
- Theoretische Chemie, Physikalisch-Chemisches Institut, Universität Heidelberg, Im Neuenheimer Feld 229, D-69120 Heidelberg, Germany
| | - Lorenz S. Cederbaum
- Theoretische Chemie, Physikalisch-Chemisches Institut, Universität Heidelberg, Im Neuenheimer Feld 229, D-69120 Heidelberg, Germany
| | - Francesco Tarantelli
- Dipartimento di Chimica and CNR I.S.T.M., Università di Perugia, I-06123 Perugia, Italy
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18
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Zhang Q, Carpenter CJ, Kemper PR, Bowers MT. On the dissolution processes of Na2I+ and Na3I2+ with the association of water molecules: mechanistic and energetic details. J Am Chem Soc 2003; 125:3341-52. [PMID: 12630890 DOI: 10.1021/ja028411y] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The sequential association energies for one through six water molecules clustering to Na(2)I(+), as well as one and two water molecules clustering to Na(3)I(2)(+), are measured. The association energies show a pairwise behavior, indicating a symmetric association of water molecules to the linear Na(2)I(+) and Na(3)I(2)(+) ions. This pairwise behavior is well reproduced by Density Functional Theory (DFT) calculations. DFT calculations also suggest that a significant separation of charge for the Na-I ion pair occurs when four or more water molecules cluster to a single sodium center. Two different solvent-separated ion pairs have been identified with the DFT calculations. Experiments also show that the dissolution processes, loss of a neutral NaI unit, occurs when six or more water molecules have been added to Na(2)I(+) cluster. However, one or two water molecules are able to detach an NaI unit from the Na(3)I(2)(+) cluster. The difference in solubility of the Na(2)I(+) and Na(3)I(2)(+) ions is due to the difference in the energies required to lose an NaI unit from these two species. The experiment also confirms that the loss of a neutral NaI unit, instead of an Na(+) ion, occurs during the dissolution processes of Na(3)I(2)(+). The microsolvation schemes proposed to explain our experimental observations are supported by DFT and phase space theory (PST) calculations.
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Affiliation(s)
- Qiang Zhang
- Department of Chemistry and Biochemistry, University of California, Santa Barbara, CA 93106-9510, USA
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20
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Yamabe S, Kouno H, Matsumura K. A Mechanism of the Ion Separation of the NaCl Microcrystal via the Association of Water Clusters. J Phys Chem B 2000. [DOI: 10.1021/jp993222w] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Shinichi Yamabe
- Department of Science Education, Nara University of Education, 630-8528, Nara, Japan
| | - Hiroko Kouno
- Department of Science Education, Nara University of Education, 630-8528, Nara, Japan
| | - Keiko Matsumura
- Department of Science Education, Nara University of Education, 630-8528, Nara, Japan
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21
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Lintuluoto M. Theoretical Study on the Adsorption of NH3 to Alkali Halide Clusters. J Phys Chem A 2000. [DOI: 10.1021/jp993726u] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Masami Lintuluoto
- Department of Environmental Information, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan
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22
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Mundy CJ, Hutter J, Parrinello M. Microsolvation and Chemical Reactivity of Sodium and Water Clusters. J Am Chem Soc 2000. [DOI: 10.1021/ja994507p] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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23
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Allouche A. Water Dissociation on Defective Sites on the NaCl(100) Surface. A Quantum ab Initio Study. J Phys Chem B 1998. [DOI: 10.1021/jp9814496] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- A. Allouche
- Université de Provence-CNRS (U.M.R 6633), Physique des Interactions Ioniques et Moléculaires, Campus Universitaire de Saint Jérôme, Service 541, 13397 Marseille Cedex 20, France
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24
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Buck U, Steinbach C. Formation of Sodium Hydroxyde in Multiple Sodium−Water Cluster Collisions. J Phys Chem A 1998. [DOI: 10.1021/jp982357j] [Citation(s) in RCA: 46] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- U. Buck
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
| | - C. Steinbach
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
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Bewig L, Buck U, Rakowsky S, Reymann M, Steinbach C. Reactions of Sodium Clusters with Water Clusters. J Phys Chem A 1998. [DOI: 10.1021/jp9727714] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- L. Bewig
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
| | - U. Buck
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
| | - S. Rakowsky
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
| | - M. Reymann
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
| | - C. Steinbach
- Max-Planck-Institut für Strömungsforschung, Bunsenstrasse 10, D-37073 Göttingen, Germany
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