1
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Jahr E, Laude G, Richardson JO. Instanton theory of tunneling in molecules with asymmetric isotopic substitutions. J Chem Phys 2020; 153:094101. [PMID: 32891112 DOI: 10.1063/5.0021831] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We consider quantum tunneling in asymmetric double-well systems for which the local minima in the two wells have the same energy, but the frequencies differ slightly. In a molecular context, this situation can arise if the symmetry is broken by isotopic substitutions. We derive a generalization of instanton theory for these asymmetric systems, leading to a semiclassical expression for the tunneling matrix element and hence the energy-level splitting. We benchmark the method using a set of one- and two-dimensional models, for which the results compare favorably with numerically exact quantum calculations. Using the ring-polymer instanton approach, we apply the method to compute the level splittings in various isotopomers of malonaldehyde in full dimensionality and analyze the relative contributions from the zero-point energy difference and tunneling effects.
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Affiliation(s)
- Elena Jahr
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Gabriel Laude
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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2
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Lee VGM, Vetterli NJ, Boyer MA, McCoy AB. Diffusion Monte Carlo Studies on the Detection of Structural Changes in the Water Hexamer upon Isotopic Substitution. J Phys Chem A 2020; 124:6903-6912. [DOI: 10.1021/acs.jpca.0c05686] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Victor G. M. Lee
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Nicholas J. Vetterli
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Mark A. Boyer
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Anne B. McCoy
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
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3
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Yang L, Ji H, Liu X, Lu W. Ring-Stacking Water Clusters: Morphology and Stabilities. ChemistryOpen 2019; 8:210-218. [PMID: 30815330 PMCID: PMC6376211 DOI: 10.1002/open.201800284] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2018] [Revised: 01/16/2019] [Indexed: 12/12/2022] Open
Abstract
The structures and interaction energies of water clusters with ring stacking motifs are studied by using ab initio calculations. The structures of the water clusters are constructed by stacking either single rings or multi-rings of tetramer, pentamer, and hexamer. We found that, in the single-ring-stacking motif, the most stable isomers exhibit an alternative clockwise-anticlockwise stacking pattern. We also show that four-layer single-ring-stacking isomers are not energetically favorable in comparison with those of two-layer multi-ring-stacking isomers. The relative stability of the isomers is also analyzed in terms of H-bond strength and elastic distortions of the water molecules.
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Affiliation(s)
- Liu Yang
- Center for Quantum Sciences and School of PhysicsNortheast Normal UniversityChangchun130117China
| | - Hanyang Ji
- Center for Quantum Sciences and School of PhysicsNortheast Normal UniversityChangchun130117China
| | - Xiaojie Liu
- Center for Quantum Sciences and School of PhysicsNortheast Normal UniversityChangchun130117China
- Center for Advanced Optoelectronic Functional Materials Research and Key Laboratory of UV Light-Emitting Materials and Technology of Ministry of EducationsNortheast Normal UniversityChangchun130024China
| | - Wen‐Cai Lu
- State Key Laboratory of Theoretical and Computational Chemistry Institute of Theoretical ChemistryJilin University ChangchunJilin130021PR China
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Cole WTS, Yönder Ö, Sheikh AA, Fellers RS, Viant MR, Saykally RJ, Farrell JD, Wales DJ. Terahertz VRT Spectroscopy of the Water Hexamer-h12 Cage: Dramatic Libration-Induced Enhancement of Hydrogen Bond Tunneling Dynamics. J Phys Chem A 2018; 122:7421-7426. [PMID: 30148958 DOI: 10.1021/acs.jpca.8b05777] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We report the assignment and analysis of 176 transitions belonging to a librational band of the (H2O)6 cage isomer near 525 cm-1(15 THz). From a fit of the transitions to an asymmetric top model, we observe both dramatic changes in the rotational constants relative to the ground state, indicating significant nonrigidity, and striking enhancement in the tunneling motions that break and reform the hydrogen bonds in the cluster. This is the fifth water cluster system to display such an enhancement in the 15 THz librational region, the details of which may help to elucidate the hydrogen bond dynamics occurring in bulk liquid water.
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Affiliation(s)
- William T S Cole
- Department of Chemistry , University of California , Berkeley , California 94720 , United States
| | - Özlem Yönder
- Department of Chemistry , University of California , Berkeley , California 94720 , United States.,Lehrstuhl für Theoretische Chemie , Ruhr-Universität Bochum , D-44780 Bochum , North Rhine-Westphalia Germany
| | - Akber A Sheikh
- Department of Chemistry , University of California , Berkeley , California 94720 , United States
| | - Raymond S Fellers
- Department of Chemistry , University of California , Berkeley , California 94720 , United States
| | - Mark R Viant
- Department of Chemistry , University of California , Berkeley , California 94720 , United States
| | - Richard J Saykally
- Department of Chemistry , University of California , Berkeley , California 94720 , United States
| | - James D Farrell
- CAS Key Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics , Institute of Physics, Chinese Academy of Sciences , Beijing 100190 , China
| | - David J Wales
- CAS Key Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics , Institute of Physics, Chinese Academy of Sciences , Beijing 100190 , China.,Department of Chemistry , University of Cambridge , Cambridge CB2 1EW , U.K
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5
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Cole WTS, Farrell JD, Sheikh AA, Yönder Ö, Fellers RS, Viant MR, Wales DJ, Saykally RJ. Terahertz VRT spectroscopy of the water hexamer-d12 prism: Dramatic enhancement of bifurcation tunneling upon librational excitation. J Chem Phys 2018. [DOI: 10.1063/1.5006195] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- William T. S. Cole
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - James D. Farrell
- CAS Key Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
| | - Akber A. Sheikh
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Öezlem Yönder
- Department of Chemistry, University of California, Berkeley, California 94720, USA
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, D-44780 Bochum, North Rhine-Westphalia, Germany
| | - Raymond S. Fellers
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Mark R. Viant
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - David J. Wales
- Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Richard J. Saykally
- Department of Chemistry, University of California, Berkeley, California 94720, USA
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6
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Richardson JO, Pérez C, Lobsiger S, Reid AA, Temelso B, Shields GC, Kisiel Z, Wales DJ, Pate BH, Althorpe SC. Concerted hydrogen-bond breaking by quantum tunneling in the water hexamer prism. Science 2016; 351:1310-3. [PMID: 26989250 DOI: 10.1126/science.aae0012] [Citation(s) in RCA: 207] [Impact Index Per Article: 25.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The nature of the intermolecular forces between water molecules is the same in small hydrogen-bonded clusters as in the bulk. The rotational spectra of the clusters therefore give insight into the intermolecular forces present in liquid water and ice. The water hexamer is the smallest water cluster to support low-energy structures with branched three-dimensional hydrogen-bond networks, rather than cyclic two-dimensional topologies. Here we report measurements of splitting patterns in rotational transitions of the water hexamer prism, and we used quantum simulations to show that they result from geared and antigeared rotations of a pair of water molecules. Unlike previously reported tunneling motions in water clusters, the geared motion involves the concerted breaking of two hydrogen bonds. Similar types of motion may be feasible in interfacial and confined water.
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Affiliation(s)
- Jeremy O Richardson
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK. Department of Chemistry, Durham University, South Road Durham DH1 3LE, UK
| | - Cristóbal Pérez
- Department of Chemistry, University of Virginia, McCormick Road, Charlottesville, VA 22903, USA
| | - Simon Lobsiger
- Department of Chemistry, University of Virginia, McCormick Road, Charlottesville, VA 22903, USA
| | - Adam A Reid
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
| | - Berhane Temelso
- Dean's Office, College of Arts and Sciences, and Department of Chemistry, Bucknell University, Lewisburg, PA 17837, USA
| | - George C Shields
- Dean's Office, College of Arts and Sciences, and Department of Chemistry, Bucknell University, Lewisburg, PA 17837, USA
| | - Zbigniew Kisiel
- Institute of Physics, Polish Academy of Sciences, Aleja Lotników 32/46, 02-668 Warszawa, Poland
| | - David J Wales
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
| | - Brooks H Pate
- Department of Chemistry, University of Virginia, McCormick Road, Charlottesville, VA 22903, USA
| | - Stuart C Althorpe
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, UK
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Vargas-Caamal A, Cabellos JL, Ortiz-Chi F, Rzepa HS, Restrepo A, Merino G. How Many Water Molecules Does it Take to Dissociate HCl? Chemistry 2016; 22:2812-8. [PMID: 26774026 DOI: 10.1002/chem.201504016] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2015] [Indexed: 11/07/2022]
Abstract
The potential energy surfaces of the HCl(H2O)n (n is the number of water molecules) clusters are systematically explored using density functional theory and high-level ab initio computations. On the basis of electronic energies, the number of water molecules needed for HCl dissociation is four as reported by some experimental groups. However, this number is five owing to the inclusion of entropic factors. Wiberg bond indices are calculated and analyzed, and the results provide a quadratic correlation and classification of clusters according to the nondissociated, partially dissociated, and fully dissociated character of the H-Cl bond. Our computations show that if temperature is not controlled during the experiment, the values obtained for the dipole moment (or for any measurable property) are susceptible to change, providing a different picture of the number of water molecules needed for HCl dissociation in a nanoscopic droplet.
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Affiliation(s)
- Alba Vargas-Caamal
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados, Unidad Mérida, Km 6 Antigua Carretera a Progreso. Apdo. Postal 73, Cordemex, 97310, Mérida, Yuc., México
| | - Jose Luis Cabellos
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados, Unidad Mérida, Km 6 Antigua Carretera a Progreso. Apdo. Postal 73, Cordemex, 97310, Mérida, Yuc., México
| | - Filiberto Ortiz-Chi
- Instituto Tecnológico Superior de Calkiní, Av. Ah-Canul s/n, Carr. Fed. Calkiní-Campeche, CP, 24900, Calkiní, Campeche, México
| | - Henry S Rzepa
- Department of Chemistry, Imperial College London, South Kensington campus, London, SW7 2AZ, UK
| | - Albeiro Restrepo
- Instituto de Química, Universidad de Antioquia UdeA, Calle 70 No. 52-21, Medellín, Colombia.
| | - Gabriel Merino
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados, Unidad Mérida, Km 6 Antigua Carretera a Progreso. Apdo. Postal 73, Cordemex, 97310, Mérida, Yuc., México.
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Pezzotti G, Puppulin L, La Rosa A, Boffelli M, Zhu W, McEntire BJ, Hosogi S, Nakahari T, Marunaka Y. Effect of pH and monovalent cations on the Raman spectrum of water: Basics revisited and application to measure concentration gradients at water/solid interface in Si3N4 biomaterial. Chem Phys 2015. [DOI: 10.1016/j.chemphys.2015.10.010] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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9
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Begum SK, Ratna SA, Clarke RJ, Ahmed MS. Excess molar volumes, refractive indices and transport properties of aqueous solutions of poly(ethylene glycol)s at (303.15–323.15) K. J Mol Liq 2015. [DOI: 10.1016/j.molliq.2014.12.025] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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10
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Albrecht L, Chowdhury S, Boyd RJ. Hydrogen Bond Cooperativity in Water Hexamers: Atomic Energy Perspective of Local Stabilities. J Phys Chem A 2013; 117:10790-9. [DOI: 10.1021/jp407371c] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Laura Albrecht
- Department
of Chemistry, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4R2
| | - Saptarshi Chowdhury
- Department
of Chemistry, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4R2
| | - Russell J. Boyd
- Department
of Chemistry, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4R2
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11
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Acelas N, Hincapié G, Guerra D, David J, Restrepo A. Structures, energies, and bonding in the water heptamer. J Chem Phys 2013; 139:044310. [DOI: 10.1063/1.4816371] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
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12
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Perez C, Muckle MT, Zaleski DP, Seifert NA, Temelso B, Shields GC, Kisiel Z, Pate BH. Structures of Cage, Prism, and Book Isomers of Water Hexamer from Broadband Rotational Spectroscopy. Science 2012; 336:897-901. [DOI: 10.1126/science.1220574] [Citation(s) in RCA: 335] [Impact Index Per Article: 27.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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13
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Ouerfelli N, Barhoumi Z, Iulian O. Viscosity Arrhenius Activation Energy and Derived Partial Molar Properties in 1,4-Dioxane + Water Binary Mixtures from 293.15 to 323.15 K. J SOLUTION CHEM 2012. [DOI: 10.1007/s10953-012-9812-9] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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14
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15
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Liu X, Lu WC, Wang C, Ho K. Energetic and fragmentation stability of water clusters (H2O)n, n=2–30. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.04.055] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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16
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Wang Y, Bowman JM. Ab initio potential and dipole moment surfaces for water. II. Local-monomer calculations of the infrared spectra of water clusters. J Chem Phys 2011; 134:154510. [DOI: 10.1063/1.3579995] [Citation(s) in RCA: 116] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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17
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Jenkins S, Restrepo A, David J, Yin D, Kirk SR. Spanning QTAIM topology phase diagrams of water isomers W4, W5 and W6. Phys Chem Chem Phys 2011; 13:11644-56. [DOI: 10.1039/c1cp20135b] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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18
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The Relative Reduced Redlich-Kister and Herráez Equations for Correlating Viscosities of 1,4-Dioxane + Water Mixtures at Temperatures from 293.15 K to 323.15 K. J SOLUTION CHEM 2009. [DOI: 10.1007/s10953-009-9484-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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19
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Takayanagi T, Yoshikawa T, Motegi H, Shiga M. Path-integral molecular dynamics simulations for water anion clusters (H2O)5- and (D2O)5-. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.09.107] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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20
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Wang Y, Shepler BC, Braams BJ, Bowman JM. Full-dimensional, ab initio potential energy and dipole moment surfaces for water. J Chem Phys 2009; 131:054511. [DOI: 10.1063/1.3196178] [Citation(s) in RCA: 123] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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21
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Santra B, Michaelides A, Fuchs M, Tkatchenko A, Filippi C, Scheffler M. On the accuracy of density-functional theory exchange-correlation functionals for H bonds in small water clusters. II. The water hexamer and van der Waals interactions. J Chem Phys 2008; 129:194111. [DOI: 10.1063/1.3012573] [Citation(s) in RCA: 206] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Baburao B, Visco DP, Albu TV. Association patterns in (HF)(m)(H2O)(n) (m + n = 2-8) clusters. J Phys Chem A 2007; 111:7940-56. [PMID: 17636970 DOI: 10.1021/jp0727648] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
In an attempt to understand the phase behavior of aqueous hydrogen fluoride, the clustering in the mixture is investigated at the molecular level. The study is performed at the mPW1B95/6-31+G(d,p) level of theory. Several previous studies attempted to describe the dissociation of HF in water, but in this investigation, the focus is only on the association patterns that are present in this binary mixture. A total of 214 optimized geometries of (HF)n(H2O)m clusters, with m + n as high as 8, were investigated. For each cluster combination, several different conformations are investigated, and the preferred conformations are presented. Using multiple linear regressions, the average strengths of the four possible H-bonding interactions are obtained. The strongest H-bond interaction is reported to be the H2O...H-F interaction. The most probable distributions of mixed clusters as a function of composition are also deduced. It is found that the larger (HF)n(H2O)m clusters are favored both energetically and entropically compared to the ones that are of size m + n < or = 3. Also, the clusters with equimolar contributions of HF and H2O are found to have the strongest interactions.
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Affiliation(s)
- Barath Baburao
- Department of Chemical Engineering, Tennessee Technological University, Box 5013, Cookeville, Tennessee 38505, USA
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Application of the ABEEM/MM model in studying the properties of the water clusters (H2O) n (n=7−10). ACTA ACUST UNITED AC 2007. [DOI: 10.1007/s11426-007-0003-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Wales DJ, Doye JPK, Miller MA, Mortenson PN, Walsh TR. Energy Landscapes: From Clusters to Biomolecules. ADVANCES IN CHEMICAL PHYSICS 2007. [DOI: 10.1002/9780470141748.ch1] [Citation(s) in RCA: 123] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Mrázek J, Burda JV. Can the pH value of water solutions be estimated by quantum chemical calculations of small water clusters? J Chem Phys 2006; 125:194518. [PMID: 17129134 DOI: 10.1063/1.2363383] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
In the study, various water clusters were explored from the point of view of the proton transfer between H-bonded neighbors. A relatively modest approach--the MP26-31++G(d,p) level--was chosen as acceptable considering the fact that also larger systems have to be included. The tight ion-pair model (with usually three fixed O-O distances) was adopted for the autodissociation process. First, cluster-estimated pH values rapidly decrease as cluster size increases from 2 to 6. For larger clusters in gas phase, the topology of H bonds plays an important role, varying pH from 7 to 13 in hexamers and from 5 to 15 in octamer clusters. The relationship energy/distance was quantified, too. Enhancing our model with the conductorlike screening model (COSMO) approach brought significant improvement in description of the autodissociation reaction with a stable zwitterionic structure. However, when the O-O restrictions were released, the small barrier for backward reaction disappeared, reforming neutral cluster spontaneously. Also Boltzmann weighting procedure was applied, and for the explored clusters in vacuo, the series of pH 25-18-14-13-10 was obtained for cluster sizes n=2, 3, 4, 6, 8. Using the COSMO approach, the analogous series is 15-14-12-10-9. The limit of the series is still about two to three units above the experimentally known pH. In order to reach the size-independent (bulk) value, larger clusters are needed. However, the situation is far from hopeless since (as it was proven in the study) four-coordinated molecules are not involved in the proton transfer process directly; they can only be a part of the surrounding environment.
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Affiliation(s)
- Jirí Mrázek
- Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 3, 121 16 Prague 2, Czech Republic
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27
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Jiang YQ, Xie ZX. A New Conformation of a Water Hexamer Chain and its Reversible Formation/Removal in the Host Channel by Gas–Solid Reaction. Supramol Chem 2006. [DOI: 10.1080/10610270500067616] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Ya-Qi Jiang
- a Department of Chemistry and State Key Laboratory for Physical Chemistry of Solid Surfaces , Xiamen University , Xiamen, 361005, China
| | - Zhao-Xiong Xie
- a Department of Chemistry and State Key Laboratory for Physical Chemistry of Solid Surfaces , Xiamen University , Xiamen, 361005, China
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Abstract
The accuracy of existing density functional methods for describing the noncovalent interaction energies in small water clusters is investigated by testing 25 density functionals against a data set of 28 water dimers and 8 water trimers whose structures are taken from the literature and from simulations. The most accurate functionals are found to be PW6B95 with a mean unsigned error of 0.13 kcal/mol and MPWB1K and B98 with mean unsigned errors of 0.15 kcal/mol; the best functional with no Hartree-Fock exchange is mPWLYP, which is a GGA with a mean unsigned error of 0.28 kcal/mol. In comparison, the most popular GGA functionals, PBE and BLYP, have mean unsigned errors of 0.52 and 1.03 kcal/mol, respectively. Since GGAs are very cost efficient for both condensed-phase simulations and electronic structure calculations on large systems, we optimized four new GGAs for water. The best of these, PBE1W and MPWLYP1W, have mean unsigned errors of 0.12 and 0.17 kcal/mol, respectively. These new functionals are well suited for use in condensed-phase simulations of water and ice.
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29
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Crittenden DL, Thompson KC, Chebib M, Jordan MJT. Efficiency considerations in the construction of interpolated potential energy surfaces for the calculation of quantum observables by diffusion Monte Carlo. J Chem Phys 2004; 121:9844-54. [PMID: 15549857 DOI: 10.1063/1.1756580] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A modified Shepard interpolation scheme is used to construct global potential energy surfaces (PES) in order to calculate quantum observables--vibrationally averaged internal coordinates, fully anharmonic zero-point energies and nuclear radial distribution functions--for a prototypical loosely bound molecular system, the water dimer. The efficiency of PES construction is examined with respect to (a) the method used to sample configurational space, (b) the method used to choose which points to add to the PES data set, and (c) the use of either a one- or two-part weight function. The most efficient method for constructing the PES is found to require a quantum sampling regime, a combination of both h-weight and rms methods for choosing data points and use of the two-part weight function in the interpolation. Using this regime, the quantum diffusion Monte Carlo zero-point energy converges to the exact result within addition of 50 data points. The vibrationally averaged O-O distance and O-O radial distribution function, however, converge more slowly and require addition of over 500 data points. The methods presented here are expected to be applicable to both other loosely bound complexes as well as tightly bound molecular species. When combined with high quality ab initio calculations, these methods should be able to accurately characterize the PES of such species.
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30
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Su JT, Xu X, Goddard WA. Accurate Energies and Structures for Large Water Clusters Using the X3LYP Hybrid Density Functional. J Phys Chem A 2004. [DOI: 10.1021/jp047502+] [Citation(s) in RCA: 122] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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31
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Lamoureux G, MacKerell AD, Roux B. A simple polarizable model of water based on classical Drude oscillators. J Chem Phys 2003. [DOI: 10.1063/1.1598191] [Citation(s) in RCA: 570] [Impact Index Per Article: 27.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Losada M, Leutwyler S. O–H flipping vibrations of the Cage water hexamer: An ab initio study. J Chem Phys 2003. [DOI: 10.1063/1.1578472] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
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Losada M, Leutwyler S. Water hexamer clusters: Structures, energies, and predicted mid-infrared spectra. J Chem Phys 2002. [DOI: 10.1063/1.1487371] [Citation(s) in RCA: 95] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
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Lankau T. (H2O)6 on a Virtual Metal Surface: Many-Body Effects in the Bilayer Structure. J Phys Chem A 2002. [DOI: 10.1021/jp014206d] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Timm Lankau
- Institut für Physikalische Chemie, University of Hamburg, 20146 Hamburg, Germany
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OI T. Molecular Orbital Estimation of Reduced Partition Function Ratios of Small Water Clusters. J NUCL SCI TECHNOL 2002. [DOI: 10.1080/18811248.2002.9715216] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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OI T. Molecular Orbital Estimation of Reduced Partition Function Ratios of Small Water Clusters. J NUCL SCI TECHNOL 2002. [DOI: 10.3327/jnst.39.419] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Maheshwary S, Patel N, Sathyamurthy N, Kulkarni AD, Gadre SR. Structure and Stability of Water Clusters (H2O)n, n = 8−20: An Ab Initio Investigation. J Phys Chem A 2001. [DOI: 10.1021/jp013141b] [Citation(s) in RCA: 414] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Affiliation(s)
- David M. Benoit
- Department of Chemistry, University College London, 20 Gordon St., London WC1H OAJ, U.K
| | - David C. Clary
- Department of Chemistry, University College London, 20 Gordon St., London WC1H OAJ, U.K
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Vaida V, Headrick JE. Physicochemical Properties of Hydrated Complexes in the Earth's Atmosphere. J Phys Chem A 2000. [DOI: 10.1021/jp000115p] [Citation(s) in RCA: 120] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- V. Vaida
- Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309-0215
| | - J. E. Headrick
- Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309-0215
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Benoit DM, Clary DC. Quaternion formulation of diffusion quantum Monte Carlo for the rotation of rigid molecules in clusters. J Chem Phys 2000. [DOI: 10.1063/1.1288788] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Severson MW, Buch V. Quantum Monte Carlo simulation of intermolecular excited vibrational states in the cage water hexamer. J Chem Phys 1999. [DOI: 10.1063/1.480451] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
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Goss LM, Sharpe SW, Blake TA, Vaida V, Brault JW. Direct Absorption Spectroscopy of Water Clusters. J Phys Chem A 1999. [DOI: 10.1021/jp9920702] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Lisa M. Goss
- Department of Chemistry and Biochemistry, University of Colorado at Boulder, Campus Box 215, Boulder, Colorado 80301, and W. R. Wiley Environmental Molecular Science Laboratory, Pacific Northwest National Lab, Mail Stop K8-88, 3020 Q Street, Richland, Washington 99352
| | - Steven W. Sharpe
- Department of Chemistry and Biochemistry, University of Colorado at Boulder, Campus Box 215, Boulder, Colorado 80301, and W. R. Wiley Environmental Molecular Science Laboratory, Pacific Northwest National Lab, Mail Stop K8-88, 3020 Q Street, Richland, Washington 99352
| | - Thomas A. Blake
- Department of Chemistry and Biochemistry, University of Colorado at Boulder, Campus Box 215, Boulder, Colorado 80301, and W. R. Wiley Environmental Molecular Science Laboratory, Pacific Northwest National Lab, Mail Stop K8-88, 3020 Q Street, Richland, Washington 99352
| | - Veronica Vaida
- Department of Chemistry and Biochemistry, University of Colorado at Boulder, Campus Box 215, Boulder, Colorado 80301, and W. R. Wiley Environmental Molecular Science Laboratory, Pacific Northwest National Lab, Mail Stop K8-88, 3020 Q Street, Richland, Washington 99352
| | - James W. Brault
- Department of Chemistry and Biochemistry, University of Colorado at Boulder, Campus Box 215, Boulder, Colorado 80301, and W. R. Wiley Environmental Molecular Science Laboratory, Pacific Northwest National Lab, Mail Stop K8-88, 3020 Q Street, Richland, Washington 99352
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Sadlej J, Buch V, Kazimirski JK, Buck U. Theoretical Study of Structure and Spectra of Cage Clusters (H2O)n, n = 7−10. J Phys Chem A 1999. [DOI: 10.1021/jp990546b] [Citation(s) in RCA: 150] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Joanna Sadlej
- Department of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland and Drug Institute, Chelmska 30/34, 00-725 Warsaw, Poland
| | - Victoria Buch
- The Fritz Haber Institute for Molecular Dynamics, Hebrew University, Jerusalem, 91904, Israel
| | | | - Udo Buck
- Max-Planck-Institut für Strömungsforschung, D-37073 Göttingen, Germany
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Rodriguez J, Laria D, Marceca EJ, Estrin DA. Isomerization, melting, and polarity of model water clusters: (H2O)6 and (H2O)8. J Chem Phys 1999. [DOI: 10.1063/1.478824] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Geleijns M, van der Avoird A. Pseudorotation tunneling in several water trimer isotopomers. J Chem Phys 1999. [DOI: 10.1063/1.478050] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
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