Micro-Raman Spectroscopy of meso-Tetrakis(p-sulfonatophenyl)porphine at Electrode Surfaces

Combined use of optical spectroscopy and computational methods to study the binding and the photoinduced conformational modification of proteins when NMR and X-ray structural determinations are not an option

The functions of proteins depend on their interactions with various ligands and these interactions are controlled by the structure of the polypeptides. If one can manipulate the structure of proteins, their functions can in principle be modulated. The issue of protein structure-function relationship is not only a central problem in biophysics, but is becoming clear that the ability to "artificially" modify the structure of proteins could be relevant in fields beyond the biomedical area to provide, for instance, light responses in proteins which would not possess such properties in their native state. This chapter presents an overview of the combination of optical electronic and vibrational spectroscopy with various computational methods to investigate the binding between photoactive ligands and proteins.

Density functional theory and Raman spectroscopy applied to structure and vibrational mode analysis of 1,1',3,3'-tetraethyl-5,5',6,6'-tetrachloro- benzimidazolocarbocyanine iodide and its aggregate

We have measured electronic and Raman scattering spectra of 1,1',3,3'-tetraethyl-5,5',6,6'-tetrachloro-benzimidazolocarbocyanine iodide (TTBC) in various environments, and we have calculated the ground state geometric and spectroscopic properties of the TTBC cation in the gas and solution phases (e.g., bond distances, bond angles, charge distributions, and Raman vibrational frequencies) using density functional theory. Our structure calculations have shown that the ground state equilibrium structure of a cis-conformer lies ∼200 cm(-1) above that of a trans-conformer and both conformers have C(2) symmetry. Calculated electronic transitions indicate that the difference between the first transitions of the two conformers is about 130 cm(-1). Raman spectral assignments of monomeric- and aggregated-TTBC cations have been aided by density functional calculations at the same level of the theory. Vibrational mode analyses of the calculated Raman spectra reveal that the observed Raman bands above 700 cm(-1) are mainly associated with the in-plane deformation of the benzimidazolo moieties, while bands below 700 cm(-1) are associated with out-of-plane deformations of the benzimidazolo moieties. We have also found that for the nonresonance excited experimental Raman spectrum of aggregated-TTBC cation, the Raman bands in the higher-frequency region are enhanced compared with those in the nonresonance spectrum of the monomeric cation. For the experimental Raman spectrum of the aggregate under resonance excitation, however, we find new Raman features below 600 cm(-1), in addition to a significantly enhanced Raman peak at 671 cm(-1) that are associated with out-of-plane distortions. Also, time-dependent density functional theory calculations suggest that the experimentally observed electronic transition at ∼515 nm (i.e., 2.41 eV) in the absorption spectrum of the monomeric-TTBC cation predominantly results from the π → π∗ transition. Calculations are further interpreted as indicating that the observed shoulder in the absorption spectrum of TTBC in methanol at 494 nm (i.e., 2.51 eV) likely results from the ν(") = 0 → ν' = 1 transition and is not due to another electronic transition of the trans-conformer-despite the fact that measured and calculated NMR results (not provided here) support the prospect that the shoulder might be attributable to the 0-0 band of the cis-conformer.

H-aggregation of cationic palladium-porphyrin as a function of anionic surfactant studied using phosphorescence, absorption and RLS spectra

Room temperature phosphorescence (RTP) was used as a useful analytical tool to investigate the interaction behavior between tetracationic meso-tetrakis (4-trimethylaminophenyl) porphyrin palladium (Pd-TAPP) and anionic sodium dodecyl sulfate (SDS). UV-vis absorption and resonance light scattering (RLS) were further applied to characterize the system. It was presumably suggested that nonspecific self-aggregates among porphyrins formed considering the relatively high concentration of Pd-TAPP. Furthermore, Pd-TAPP changed from free monomer/nonspecific aggregate to H-aggregate and then to out-micellized monomer/nonspecific aggregate as a function of SDS concentration. The fact that RTP signal enhanced obviously and excitation spectrum was blue-shifted by 1580cm(-1) in energy with respect to energy of free Pd-TAPP monomer demonstrated that 1:4 electrostatic interaction between Pd-TAPP and SDS led to the formation of the premicellar porphyrin-surfactant H-aggregates. The RLS spectrum reviewed that the formed H-aggregates were multiple porphyrin units, and UV-vis spectra revealed that cationic groups of monomers/nonspecific aggregates of Pd-TAPP were electrostatically attracted in favor of the surface of anionic micelles but were not encapsulated within apolar regions of SDS micelles when the concentration of SDS was above its critical micelle concentration (CMC).

From fractal to nanorod porphyrin J-aggregates. Concentration-induced tuning of the aggregate size

A structural change from fractal to nanorod J-aggregates of tetrakis(4-sulfonatophenyl)porphyrin has been obtained by acting on the intermolecular interaction potential. The size and shape of these self-assembled porphyrin clusters have been monitored under different experimental conditions, by means of polarized and depolarized dynamic light scattering and small and wide angle elastic light scattering. At sufficiently low porphyrin concentration and high ionic strength, the shielded repulsive potential seems to be responsible for the fractal structure of the aggregates. On the contrary, at low ionic strength (nonshielded potential) and high porphyrin concentration, these species self-assemble in a rodlike arrangement. The length of the so-formed rod-shaped aggregates decreases on increasing porphyrin concentration. Moreover, both fractals and rods display a structure-dependent optical activity induced by a chiral template.

Three-Dimensional Vibrational Imaging of a Microcrystalline J-Aggregate Using Supercontinuum-Based Ultra-Broadband Multiplex Coherent Anti-Stokes Raman Scattering Microscopy

Vibrational properties of a porphyrin J-aggregate microcrystal have been investigated by ultra-broadband multiplex coherent anti-Stokes Raman scattering (CARS) microspectroscopy using a supercontinuum light source generated from a photonic crystal fiber. Owing to a strong resonance effect due to an excitonic transition, clear spectral and spatial profiles of the CARS signal have been successfully obtained. On the basis of the comparison between the CARS and the fluorescence images, the spatial dependence of the CARS signal can be explained by the spatial inhomogeneity of the excitonic transition energy in the single J-aggregate microcrystal.

Aggregation Behavior of Tetrakis(4-sulfonatophenyl)porphyrin in AOT/Water/Decane Microemulsions

AOT/water/decane microemulsions have been used to entrap the water-soluble 5,10,15,20-tetrakis(4-sulfonatophenyl)porphyrin (TPPS4). Quasi-elastic light scattering technique has confirmed the confinement of the porphyrin and its various aggregates into the inner water pool. Various species have been detected as function of the size of the microemulsions, concentration of the porphyrin, pH, and aging of the solutions by using a combination of UV-vis absorption, steady fluorescence emission, fluorescence lifetime measurements, and time-resolved fluorescence anisotropy. Under neutral pH conditions, the porphyrin is present as the free base monomer (S414) in the inner water compartment, and it is free to rotate when the size of the droplet is large enough and the porphyrin concentration is low. On increasing the concentration and/or decreasing the microemulsion size, a H-dimer of the free base (S406) is prevalently formed. Aging both the S414 and S406 species leads to the formation of a new species (S424), which has been postulated as a H-type dimer of the diacid porphyrin. On decreasing the pH, the species S414 and S406 almost instantaneously convert into the diacid porphyrin, which is monomeric (S434). This latter is an intermediate in the eventual formation of J-aggregated TPPS4 (S490). A marked stability has been observed for the S424 species, which do not interconvert on changing the pH of the bulk aqueous phase.

pH-Dependent reversible transformation of TPPS4 anchored on mesoporous TiO2 film between monomers and J-aggregates

Protonated TPPS4 monomer and its J-aggregate were formed simultaneously from TPPS4 adsorbed through its sulfonic acid groups on TiO2 porous film by decreasing the pH of the surrounding water and this behavior on TiO2 film can be reversibly repeated depending on pH, indicating a flexible and stable arrangement of TPPS4 through chemical bonds between the sulfonic acid groups and the TiO2 surface.

In vitro interaction of macrocyclic photosensitizers with intact mitochondria: a spectroscopic study

Six water-soluble macrocyclic photosensitizers, the members of two groups of expanded porphyrins (metallotexaphyrins and free-base sapphyrins) containing hydrophilic substituents and meso-tetra(4-sulfonatophenyl)-porphyrin, were tested by UV-Vis absorption and resonance Raman spectroscopy in the in vitro binding experiments with intact mitochondria isolated from swine liver. Studied macrocycles showed markedly different affinity to mitochondria. The highest uptake was observed for sapphyrin-sugar conjugate and metallotexaphyrins. Sapphyrin-polyamine conjugates exhibit something less affinity to mitochondria, while the porphyrin of anionic character showed very low mitochondrial uptake. Obtained spectroscopic results confirm that the binding process altered the self-aggregation degree of expanded porphyrins.

Unusual emissions from low-concentrated porphyrin solutions

This contribution presents fluorescence measurements from highly diluted tetratolylporphyrin (TTP) solutions where acetone has been chosen as solvent. The concentrations of the solutions ranged from 10(-8) to 10(-14) M. Apart the normal S1-S0 fluorescence a new broad emission was recorded below 10(-8) M. This new emission blue-shifted to the S1-S0 fluorescence covered the spectral range between 19000 and 14000 cm(-1). Within the dilution series, both the S1-S0 porphyrin fluorescence and the new emission exhibited a remarkably non-linear concentration-dependence. In the case in which the aggregate emission was strong, little S1-S0 emission could be detected and vice versa. The intensity maximum of the broad emission was detected from a 10(-13) M solution. The supplementary fluorescence was attributed to the presence of assembled molecules. This assumption was established by comparing the measurements with those obtained from 1:1 acetone water solvent mixtures in which the formation of aggregates had been formerly proven. The emission originating from the formation of aggregates was interpreted by a qualitative model considering the energy levels of J-aggregated porphyrins.

Raman and infrared spectral study of meso-sulfonatophenyl substituted porphyrins (TPPSn, n = 1, 2A, 2O, 3, 4)

Raman and IR spectra of the free base p-sulfonatophenyl and phenyl meso-substituted porphyrins [5,10,15,20-tetrakis(4-sulfonatophenyl)porphyrin (TPPS4); 5,10,15-tris(4-sulfonatophenyl)-20-phenyl-porphyrin (TPPS3); 5,10-bis(4-sulfonatophenyl)-15,20-diphenylporphyrin (TPPS2A); 5,15-bis(4-sulfonatophenyl)-10,20-diphenylporphyrin (TPPS2O); and 5-(4-sulfonatophenyl)-10, 15,20-trisphenylporphyrin (TPPS1)] and their N-diprotonated derivatives (porphyrin diacids) were studied. The Raman spectra of the deuterated analogues of these porphyrins, in which the central hydrogen atoms were substituted with deuterium, were also measured. The observed vibrational bands were assigned on the basis of the deuteration shifts and compared with the structural analogues of these compounds. In IR spectra of the free-base porphyrins, the p-sulfonation of phenyl groups results in evident alteration for the phenyl modes and the porphyrin skeleton modes that are strongly coupled with phenyl vibrations. While the p-sulfonation of phenyl groups causes only slight changes for the high-frequency Raman bands (> 850 cm(-1)), dramatic shifts and band splitting were observed in the low-frequency region (< 500 cm(-1)) of Raman spectra. The observed differences of low-frequency Raman spectra were attributed to the alteration of the structure of the porphyrin ring, especially the CalphaCmCalpha bond-angles, by different meso-sulfonatophenyl substitutions. In addition, different packing style of TPPSn molecules in the aggregates is also responsible for the alteration of the vibrational spectra of the aggregated TPPSn.

Raman and UV-visible absorption spectra of ion-paired aggregates of copper porphyrins

Raman and UV-visible absorption spectra of ion-paired aggregate constructed from two copper porphyrins, copper tetrakis(4-N-methylpyridyl)porphyrin (CuTMPyP) and copper tetrakis(4-sulfonatophenyl)pophyrin (CuTSPP), are reported in this paper. The absorption bands of the aggregate was found exhibiting obvious shift and broadening, which are attributed to the excitonic coupling between the two paired porphyrin rings. The excitonic coupling in the aggregates also induces evident alteration for Raman intensities compared with monomer spectrum. Aggregation results in only small shifts (2-3 cm(-1)) for Raman lines connecting with the vibrations of porphyrin rings, manifesting only slight structural change of porphyrin skeletons. On the other hand, evident downshift (5 cm(-1)) was observed for the Cm-pyridyl stretch mode (1254 cm(-1)) of CuTMPyP, suggesting weakening of the Cm-pyridyl bonds by aggregation. Raman depolarization ratios of the aggregates are different from those of the monomers, implying a lowering of effective symmetry due to the molecular packing in the aggregates.

Reaction of metallotetraphenylporphyrins on hydroxyl-modified silver colloid and Ag2O colloid by surface-enhanced Raman scattering

This paper reports a novel reaction of metallotetraphenylporphyrins on hydroxyl-modified silver colloid and Ag2O colloid. Surface-enhanced Raman spectra of Ag(II) and Cu(II) complexes of tetraphenylporphyrin (TPP) adsorbed on the hydroxyl-modified Ag colloid and Ag2O colloid have been studied. The time-dependent SERS spectra of MTPP (M = Ag, Cu) on hydroxyl-modified Ag colloid were recorded and dramatic change on SERS spectra was observed. The final spectra were found to be strikingly different from the corresponding normal Raman spectra (NRS), with the appearance of new Raman bands at 1614. 1417, 947, 674 and 292 cm(-1). The UV-visible absorption spectrum of MTPP on hydroxyl-modified Ag colloid exhibits a broad shoulder near 460 nm. Similar spectral phenomena were also observed for AgTPP and CuTPP adsorbed on Ag2O colloid. The observed spectral alterations were ascribed to new species formation due to the irreducible oxidation of MTPP on the colloids.