1
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Abstract
The catalytic effect of ionization on the Diels-Alder reaction between 1,3-butadiene and acrylaldehyde has been studied using relativistic density functional theory (DFT). Removal of an electron from the dienophile, acrylaldehyde, significantly accelerates the Diels-Alder reaction and shifts the reaction mechanism from concerted asynchronous for the neutral Diels-Alder reaction to stepwise for the radical-cation Diels-Alder reaction. Our detailed activation strain and Kohn-Sham molecular orbital analyses reveal how ionization of the dienophile enhances the Diels-Alder reactivity via two mechanisms: (i) by amplifying the asymmetry in the dienophile's occupied π-orbitals to such an extent that the reaction goes from concerted asynchronous to stepwise and thus with substantially less steric (Pauli) repulsion per reaction step; (ii) by enhancing the stabilizing orbital interactions that result from the ability of the singly occupied molecular orbital of the radical-cation dienophile to engage in an additional three-electron bonding interaction with the highest occupied molecular orbital of the diene.
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Affiliation(s)
- Pascal Vermeeren
- Department of Theoretical Chemistry Amsterdam Institute of Molecular and Life Sciences (AIMMS) Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - Trevor A. Hamlin
- Department of Theoretical Chemistry Amsterdam Institute of Molecular and Life Sciences (AIMMS) Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - F. Matthias Bickelhaupt
- Department of Theoretical Chemistry Amsterdam Institute of Molecular and Life Sciences (AIMMS) Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
- Institute for Molecules and MaterialsRadboud University NijmegenHeyendaalseweg 1356525 AJNijmegenThe Netherlands
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2
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Yang Y, Liu Q, Zhang L, Yu H, Dang Z. Mechanistic Investigation on Oxygen-Mediated Photoredox Diels–Alder Reactions with Chromium Catalysts. Organometallics 2017. [DOI: 10.1021/acs.organomet.6b00886] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yimeng Yang
- Department
of Polymer Science and Engineering, University of Science and Technology Beijing, Beijing 100083, People’s Republic of China
- Department
of Chemistry and Center for Atomic Engineering of Advanced Materials, Anhui University, Hefei 230601, People’s Republic of China
| | - Qian Liu
- Department
of Chemistry and Center for Atomic Engineering of Advanced Materials, Anhui University, Hefei 230601, People’s Republic of China
| | - Liang Zhang
- Department
of Polymer Science and Engineering, University of Science and Technology Beijing, Beijing 100083, People’s Republic of China
| | - Haizhu Yu
- Department
of Chemistry and Center for Atomic Engineering of Advanced Materials, Anhui University, Hefei 230601, People’s Republic of China
| | - Zhimin Dang
- Department
of Polymer Science and Engineering, University of Science and Technology Beijing, Beijing 100083, People’s Republic of China
- State
Key Laboratory of Power System and Department of Electrical Engineering, Tsinghua University, Beijing 100084, People’s Republic of China
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3
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Chen J, Cao M, Wei B, Ding M, Shan X, Liu F, Sheng L. Vacuum ultraviolet photoionization mass spectrometric study of cyclohexene. JOURNAL OF MASS SPECTROMETRY : JMS 2016; 51:169-181. [PMID: 26889934 DOI: 10.1002/jms.3743] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2015] [Revised: 12/03/2015] [Accepted: 12/16/2015] [Indexed: 06/05/2023]
Abstract
In this work, photoionization and dissociation of cyclohexene have been studied by means of coupling a reflectron time-of-flight mass spectrometer with the tunable vacuum ultraviolet (VUV) synchrotron radiation. The adiabatic ionization energy of cyclohexene as well as the appearance energies of its fragment ions C6 H9 (+) , C6 H7 (+) , C5 H7 (+) , C5 H5 (+) , C4 H6 (+) , C4 H5 (+) , C3 H5 (+) and C3 H3 (+) were derived from the onset of the photoionization efficiency (PIE) curves. The optimized structures for the transition states and intermediates on the ground state potential energy surfaces related to photodissociation of cyclohexene were characterized at the ωB97X-D/6-31+g(d,p) level. The coupled cluster method, CCSD(T)/cc-pVTZ, was employed to calculate the corresponding energies with the zero-point energy corrections by the ωB97X-D/6-31+g(d,p) approach. Combining experimental and theoretical results, possible formation pathways of the fragment ions were proposed and discussed in detail. The retro-Cope rearrangement was found to play a crucial role in the formation of C4 H6 (+) , C4 H5 (+) and C3 H5 (+) . Intramolecular hydrogen migrations were observed as dominant processes in most of the fragmentation pathways of cyclohexene. The present research provides a clear picture of the photoionization and dissociation processes of cyclohexene in the 8- to 15.5-eV photon energy region.
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Affiliation(s)
- Jun Chen
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, 230029, China
| | - Maoqi Cao
- Department of Chemistry, Qian Nan Normal College for Nationalities, Duyun, 558000, Guizhou, China
| | - Bin Wei
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, 230029, China
| | - Mengmeng Ding
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, 230029, China
| | - Xiaobin Shan
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, 230029, China
| | - Fuyi Liu
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, 230029, China
| | - Liusi Sheng
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, 230029, China
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4
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Yamada M, Akasaka T. Emergence of Highly Elaborated π-Space and Extending Its Functionality Based on Nanocarbons: New Vistas in the Fullerene World. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2014. [DOI: 10.1246/bcsj.20140295] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
| | - Takeshi Akasaka
- Department of Chemistry, Tokyo Gakugei University
- Life Science Center of Tsukuba Advanced Research Alliance, University of Tsukuba
- Foundation for Advancement of International Science
- School of Materials Science and Engineering, Huazhong University of Science and Technology
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5
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de Oteyza DG, Gorman P, Chen YC, Wickenburg S, Riss A, Mowbray DJ, Etkin G, Pedramrazi Z, Tsai HZ, Rubio A, Crommie MF, Fischer FR. Direct Imaging of Covalent Bond Structure in Single-Molecule Chemical Reactions. Science 2013; 340:1434-7. [DOI: 10.1126/science.1238187] [Citation(s) in RCA: 453] [Impact Index Per Article: 41.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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6
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Sato S, Maeda Y, Guo JD, Yamada M, Mizorogi N, Nagase S, Akasaka T. Mechanistic Study of the Diels–Alder Reaction of Paramagnetic Endohedral Metallofullerene: Reaction of La@C82 with 1,2,3,4,5-Pentamethylcyclopentadiene. J Am Chem Soc 2013; 135:5582-7. [DOI: 10.1021/ja309763f] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Satoru Sato
- Life Science Center of Tsukuba Advanced
Research Alliance, University of Tsukuba, Tsukuba, Ibaraki 305-8577, Japan
| | - Yutaka Maeda
- Department of Chemistry, Tokyo Gakugei University, Koganei, Tokyo 184-8501, Japan
| | - Jing-Dong Guo
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
| | - Michio Yamada
- Department of Chemistry, Tokyo Gakugei University, Koganei, Tokyo 184-8501, Japan
| | - Naomi Mizorogi
- Life Science Center of Tsukuba Advanced
Research Alliance, University of Tsukuba, Tsukuba, Ibaraki 305-8577, Japan
| | - Shigeru Nagase
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
| | - Takeshi Akasaka
- Life Science Center of Tsukuba Advanced
Research Alliance, University of Tsukuba, Tsukuba, Ibaraki 305-8577, Japan
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7
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Domingo LR, Pérez-Ruiz R, Argüello JE, Miranda MA. DFT Study on the Molecular Mechanism of the [4 + 2] Cycloaddition between Thiobenzophenone and Arylalkenes via Radical Cations. J Phys Chem A 2009; 113:5718-22. [DOI: 10.1021/jp900486e] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Luis R. Domingo
- Departamento de Química Orgánica, Universidad de Valencia, Dr. Moliner 50, E-46100 Burjassot, Valencia, Spain, Departamento de Química, Instituto de Tecnología Química UPV-CSIC, Universidad Politécnica de Valencia, Camino de Vera s/n, 46022 Valencia, Spain, and INFIQC, Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, 5000 Córdoba, Argentina
| | - Raúl Pérez-Ruiz
- Departamento de Química Orgánica, Universidad de Valencia, Dr. Moliner 50, E-46100 Burjassot, Valencia, Spain, Departamento de Química, Instituto de Tecnología Química UPV-CSIC, Universidad Politécnica de Valencia, Camino de Vera s/n, 46022 Valencia, Spain, and INFIQC, Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, 5000 Córdoba, Argentina
| | - Juan E. Argüello
- Departamento de Química Orgánica, Universidad de Valencia, Dr. Moliner 50, E-46100 Burjassot, Valencia, Spain, Departamento de Química, Instituto de Tecnología Química UPV-CSIC, Universidad Politécnica de Valencia, Camino de Vera s/n, 46022 Valencia, Spain, and INFIQC, Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, 5000 Córdoba, Argentina
| | - Miguel A. Miranda
- Departamento de Química Orgánica, Universidad de Valencia, Dr. Moliner 50, E-46100 Burjassot, Valencia, Spain, Departamento de Química, Instituto de Tecnología Química UPV-CSIC, Universidad Politécnica de Valencia, Camino de Vera s/n, 46022 Valencia, Spain, and INFIQC, Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, 5000 Córdoba, Argentina
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8
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Sevov CS, Wiest O. Selectivity in the Electron Transfer Catalyzed Diels−Alder Reaction of (R)-α-Phellandrene and 4-Methoxystyrene. J Org Chem 2008; 73:7909-15. [DOI: 10.1021/jo8002562] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Christo S. Sevov
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
| | - Olaf Wiest
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
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9
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Abstract
Electron transfer is the simplest reaction possible, yet it has a profound impact on the structure and reactivity of organic compounds. These changes allow a new look at some of the fundamental concepts that are used to explain organic chemistry, such as symmetry, aromaticity, and bonding. The results from high-level electronic structure calculations are used to analyze the mechanistic differences in the pericyclic reactions of simple hydrocarbons and their radical cation counterparts. The importance of state symmetry correlation, Jahn-Teller distortions, delocalization, and fractional bonding for the reaction pathways of hydrocarbon radical cations is discussed.
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Affiliation(s)
- Patrick J Donoghue
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556-5670, USA
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10
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Goebbert DJ, Liu X, Wenthold PG. Reactions of diacetylene radical cation with ethylene. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2004; 15:114-120. [PMID: 14698561 DOI: 10.1016/j.jasms.2003.10.003] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Ion-molecule reactions and energy-resolved mass spectrometry have been used to determine the structures of the products formed in the reaction of diacetylene radical cation with ethylene in a flowing afterglow-triple quadrupole instrument. The structure of the adduct ion, C(6)H(6)(.+), has been determined to be that of singly ionized benzene. The reaction thus presents a first example of the ability of diacetylene radical cation to undergo an aromatic ring forming reaction. The other products formed in the reaction are m/z 52, C(4)H(4)(.+), and m/z 39, C(3)H(3)(+). Isotopic labeling studies show that C(4)H(4)(.+) and C(3)H(3)(+) are formed with nearly statistical hydrogen incorporation, indicating a complex mechanism that scrambles all protons.
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Affiliation(s)
- Daniel J Goebbert
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, USA
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11
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Fu YS, Tsai SC, Huang CH, Yen SY, Hu WP, Yu SJ. Kinetics study and theoretical modeling of the Diels-Alder reactions of cyclopentadiene and cyclohexadiene with methyl vinyl ketone. The effects of a novel organotungsten catalyst. J Org Chem 2003; 68:3068-77. [PMID: 12688774 DOI: 10.1021/jo026596l] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The Diels-Alder reaction rate constants of methyl vinyl ketone with cyclopentadiene and cyclohexadiene in the presence of a novel organotungsten catalyst, [P(2-py)(3)W(CO)(NO)(2)](2+), have been measured experimentally and modeled theoretically at several temperatures. The uncatalyzed systems were also studied for direct comparison. When 0.0022 M of catalyst is present at room temperature, the rate constants were found to be approximately 5.3 and 5300 times higher than the corresponding uncatalyzed reactions for cyclopentadiene and cyclohexadiene systems, respectively. Experimental data suggested that the catalyst reduced the activation energies by 5-10 kcal/mol. However, the preexponential factors showed reduction of more than 3 orders of magnitude upon catalysis due to the entropic effects. The energy barriers and the rate constants of the uncatalyzed systems were accurately modeled by correlated electronic structure and dual-level variational transition state theory calculation. The calculated endo selectivity is in good agreement with the observed product distribution. Theoretical calculation also suggested the catalyzed reactions proceeded in a highly asynchronous or even stepwise fashion.
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Affiliation(s)
- Yaw-Shien Fu
- Department of Chemistry and Biochemistry, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan 621
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12
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Structure and reactivity of hydrocarbon radical cations. ADVANCES IN PHYSICAL ORGANIC CHEMISTRY 2003. [DOI: 10.1016/s0065-3160(03)38002-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
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13
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Wannere CS, Bansal RK, von Ragué Schleyer P. Diels-Alder Reaction of phosphaethene with 1,3-dienes: an ab initio study. J Org Chem 2002; 67:9162-74. [PMID: 12492316 DOI: 10.1021/jo026284i] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Computations on Diels-Alder (DA) reactions of phosphaethene with 1,3-butadiene and with isoprene reveal asynchronous transition structures. The DFT (B3LYP/6-311+G) activation energies of these reactions, 12-14 kcal/mol, are much lower than that of the parent ethene-butadiene reaction, 28 kcal/mol, even though the exothermicities of all lie in the same range, from -29 to -33 kcal/mol. The transition states (TSs) for the phosphethene-butadiene or isoprene DA reactions are earlier than the TSs of the butadiene-ethene cycloaddition. Due to the weakness of the C=P pi bond compared to the C=C pi bonds, the energies required to reach the phosphaethene TSs are much less than the carbocyclic cases. The computed (1)H NMR chemical shifts and nucleus independent chemical shifts (NICS) quantify the aromatic character of the transition states. Regioselectivities of the neutral phosphaethene-isoprene DA reactions are modest, at best. However, computations on radical cation DA reactions of phosphaethene with isoprene, which proceed stepwise with open chain intermediates, can account for the high regioselectivities that have been observed in some cases.
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Affiliation(s)
- Chaitanya S Wannere
- The Computational Chemistry Annex, Department of Chemistry, University of Georgia, Athens, Georgia 30602-2525, USA
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14
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Hu H, Wenthold PG. Reaction of the Butadiene Cation with Ethylene in the Gas Phase. J Phys Chem A 2002. [DOI: 10.1021/jp0265135] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Haiqing Hu
- Department of Chemistry, Brown 1393, Purdue University, West Lafayette, Indiana 47907-1393
| | - Paul G. Wenthold
- Department of Chemistry, Brown 1393, Purdue University, West Lafayette, Indiana 47907-1393
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Saettel NJ, Wiest O, Singleton DA, Meyer MP. Isotope effects and the mechanism of an electron-transfer-catalyzed Diels-Alder reaction. J Am Chem Soc 2002; 124:11552-9. [PMID: 12236770 DOI: 10.1021/ja026924z] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The electron-transfer-catalyzed Diels-Alder reaction of indole and 1,3-cyclohexadiene was studied by a combination of experimental and theoretical methods. The (13)C kinetic isotope effects were determined at natural abundance by NMR methodology. B3LYP/6-31G* calculations allow for the first time a quantitatively accurate description of the different possible pathways and provide the basis for an analysis of the experimentally observed isotope effects. The computational results, in conjunction with experimental observations, show that the reaction has a stepwise mechanism that is initiated by attack of the diene into the 3-position of the indole. Numerical simulation of the experimentally observed isotope effects shows that the first step is rate-determining and that the electron exchange in the reactant contributes partially to the overall isotope effect. The combination of electronic structure theory, experimental isotope effects, and numerical simulation thus allows a detailed analysis of a complex reaction mechanism.
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Affiliation(s)
- Nicolas J Saettel
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556-5670, USA
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Hu H, Wenthold PG. The structure of ionized 1,5 hexadiene in the gas phase. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2001; 12:840-845. [PMID: 11444607 DOI: 10.1016/s1044-0305(01)00252-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The structure of ionized 1,5-hexadiene, prepared by charge transfer between 1,5-hexadiene and CS2+*, is examined using energy-resolved collision-induced dissociation (CID). By comparing the product distributions and product appearance curves with those of authentic low-energy C6H10+* ions, it is determined that 1,5-hexadiene cation spontaneously rearranges to cyclohexene cation in the gas-phase. The proposed mechanism for formation of cyclohexene cation in the gas phase is analogous to that determined for this process under matrix isolation conditions, where it proceeds via a Cope rearrangement to the cyclohexane-1,4-diyl cation, followed by isomerization to cyclohexene cation. It is shown that electron ionization (EI) of 1,5-hexadiene gives a different molecular ion than is obtained upon chemical ionization (CI). The energy-resolved CID mass spectrum for the EI product is consistent with what would be obtained for a mixture of low energy ion isomers.
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Affiliation(s)
- H Hu
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-1393, USA
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19
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Abstract
In the past 25 years, a tremendous amount of work has been published on the ion/molecule reactions of organic species. This review provides an overview of the areas where gas phase ion chemistry has made a contribution to our understanding of fundamental organic reaction processes. It is clear that the gas phase work can provide insights into subtle features of reaction mechanisms that could not be addressed by conventional condensed phase methods. The study of ion/molecule reactions has already had a major impact on the way that organic chemists think about reaction mechanisms and interpret substituent effects. Moreover, it has heightened our awareness of the importance of solvation effects and how they can alter not only absolute rates but also relative rates, leading in some cases to complete reversals in reactivity patterns. A large body of work could not be included in this review due to space limitations. For example, the study of thermochemistry in the gas phase (i.e., acidities, basicities, bond strengths, binding energies, etc.) has provided a wealth of data that has been exceptionally useful in interpreting organic reaction mechanisms. This has spilled over into the study of organometallic systems, and several groups are making major headway in using mass spectrometry to probe the stability and reactivity of transition metal species. Finally, work involving chemical ionization has provided abundant information on gas phase reaction mechanisms. The future appears to be very promising for the study of gas phase organic reaction mechanisms. In particular, the emergence of new ionization techniques and more powerful mass analyzers will allow chemists to explore a wider range of species. Although still at an early stage, the gas phase study of biochemical transformations offers great promise and has been facilitated by electrospray and matrix assisted laser desorption ionization methods. In addition, these techniques provide a means for introducing important, metal-centered catalytic species into the gas phase and exploring the details of their reactivity. Finally, mass spectrometry continues to play a major role in the study of atmospheric ion chemistry and is providing important kinetic as well as mechanistic data.
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Affiliation(s)
- S Gronert
- Department of Chemistry and Biochemistry, San Francisco State University, San Francisco, California 94132, USA
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