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For: Fanetti S, Lapini A, Pagliai M, Citroni M, Di Donato M, Scandolo S, Righini R, Bini R. Structure and Dynamics of Low-Density and High-Density Liquid Water at High Pressure. J Phys Chem Lett 2014;5:235-40. [PMID: 26276206 DOI: 10.1021/jz402302z] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Number Cited by Other Article(s)
1
Förster M, Ukoji N, Sahle CJ, Niskanen J, Sakrowski R, Surmeier G, Weis C, Irifune T, Imoto S, Yavas H, Huotari S, Marx D, Sternemann C, Tse JS. Generating interstitial water within the persisting tetrahedral H-bond network explains density increase upon compressing liquid water. Proc Natl Acad Sci U S A 2024;121:e2403662121. [PMID: 39284048 DOI: 10.1073/pnas.2403662121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Accepted: 07/16/2024] [Indexed: 10/02/2024]  Open
2
Mokshin AV, Vlasov RV. Liquid-Liquid Crossover in Water Model: Local Structure vs Kinetics of Hydrogen Bonds. J Phys Chem B 2024. [PMID: 38411102 DOI: 10.1021/acs.jpcb.3c07650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/28/2024]
3
Daidone I, Foffi R, Amadei A, Zanetti-Polzi L. A statistical mechanical model of supercooled water based on minimal clusters of correlated molecules. J Chem Phys 2023;159:094502. [PMID: 37655770 DOI: 10.1063/5.0157505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Accepted: 08/14/2023] [Indexed: 09/02/2023]  Open
4
Liu R, Chen M. Characterization of the Hydrogen-Bond Network in High-Pressure Water by Deep Potential Molecular Dynamics. J Chem Theory Comput 2023;19:5602-5608. [PMID: 37535904 DOI: 10.1021/acs.jctc.3c00445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/05/2023]
5
Capelli R, Muniz-Miranda F, Pavan GM. Ephemeral ice-like local environments in classical rigid models of liquid water. J Chem Phys 2022;156:214503. [DOI: 10.1063/5.0088599] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
6
Faccio C, Benzi M, Zanetti-Polzi L, Daidone I. Low- and high-density forms of liquid water revealed by a new medium-range order descriptor. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.118922] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
7
Hydrogen bonding in liquid water at 1 GPa : Molecular dynamics simulation study of TIP4P/2005 water model. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2021.113527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
8
Modification of local and collective dynamics of water in perchlorate solution, induced by pressure and concentration. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.116273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
9
Piskulich ZA, Thompson WH. Examining the Role of Different Molecular Interactions on Activation Energies and Activation Volumes in Liquid Water. J Chem Theory Comput 2021;17:2659-2671. [PMID: 33819026 DOI: 10.1021/acs.jctc.0c01217] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
10
Linear and Non-Linear Middle Infrared Spectra of Penicillin G in the CO Stretching Mode Region. Symmetry (Basel) 2021. [DOI: 10.3390/sym13010106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]  Open
11
Coppola F, Perrella F, Petrone A, Donati G, Rega N. A Not Obvious Correlation Between the Structure of Green Fluorescent Protein Chromophore Pocket and Hydrogen Bond Dynamics: A Choreography From ab initio Molecular Dynamics. Front Mol Biosci 2020;7:569990. [PMID: 33195416 PMCID: PMC7653547 DOI: 10.3389/fmolb.2020.569990] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 09/11/2020] [Indexed: 11/23/2022]  Open
12
Donati G, Petrone A, Rega N. Multiresolution continuous wavelet transform for studying coupled solute-solvent vibrations via ab initio molecular dynamics. Phys Chem Chem Phys 2020;22:22645-22661. [PMID: 33015693 DOI: 10.1039/d0cp02495c] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
13
Priyadarsini A, Dasari S, Mallik BS. Thermophysical Properties and Angular Jump Dynamics of Water: A Comparative DFT and DFT-Dispersion-Based Molecular Dynamics Study. J Phys Chem A 2020;124:6039-6049. [DOI: 10.1021/acs.jpca.0c02909] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
14
Taschin A, Bartolini P, Fanetti S, Lapini A, Citroni M, Righini R, Bini R, Torre R. Pressure Effects on Water Dynamics by Time-Resolved Optical Kerr Effect. J Phys Chem Lett 2020;11:3063-3068. [PMID: 32212735 DOI: 10.1021/acs.jpclett.0c00363] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
15
Priyadarshini A, Biswas A, Chakraborty D, Mallik BS. Structural and Thermophysical Anomalies of Liquid Water: A Tale of Molecules in the Instantaneous Low- and High-Density Regions. J Phys Chem B 2020;124:1071-1081. [DOI: 10.1021/acs.jpcb.9b11596] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
16
Friant-Michel P, Wax JF, Meyer N, Xu H, Millot C. Translational and Rotational Diffusion in Liquid Water at Very High Pressure: A Simulation Study. J Phys Chem B 2019;123:10025-10035. [PMID: 31725300 DOI: 10.1021/acs.jpcb.9b06884] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
17
Pagliai M, Macchiagodena M, Procacci P, Cardini G. Evidence of a Low-High Density Turning Point in Liquid Water at Ordinary Temperature under Pressure: A Molecular Dynamics Study. J Phys Chem Lett 2019;10:6414-6418. [PMID: 31584829 DOI: 10.1021/acs.jpclett.9b02724] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
18
Fanetti S, Falsini N, Bartolini P, Citroni M, Lapini A, Taschin A, Bini R. Superheating and Homogeneous Melting Dynamics of Bulk Ice. J Phys Chem Lett 2019;10:4517-4522. [PMID: 31342749 DOI: 10.1021/acs.jpclett.9b01490] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
19
Martelli F. Unravelling the contribution of local structures to the anomalies of water: The synergistic action of several factors. J Chem Phys 2019;150:094506. [PMID: 30849899 DOI: 10.1063/1.5087471] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
20
Espinosa YR, Caffarena ER, Grigera JR. The role of hydrophobicity in the cold denaturation of proteins under high pressure: A study on apomyoglobin. J Chem Phys 2019;150:075102. [PMID: 30795674 DOI: 10.1063/1.5080942] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
21
Imoto S, Marx D. Pressure response of the THz spectrum of bulk liquid water revealed by intermolecular instantaneous normal mode analysis. J Chem Phys 2019;150:084502. [PMID: 30823759 DOI: 10.1063/1.5080381] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
22
Koga Y. The effect of temperature on fluctuation functions in pure H2O and n-hexane: Wavelength (extensity) vs. amplitude (intensity). J Mol Liq 2018. [DOI: 10.1016/j.molliq.2018.04.114] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
23
The solvent side of proteinaceous membrane-less organelles in light of aqueous two-phase systems. Int J Biol Macromol 2018;117:1224-1251. [PMID: 29890250 DOI: 10.1016/j.ijbiomac.2018.06.030] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Accepted: 06/07/2018] [Indexed: 12/29/2022]
24
Fanetti S, Citroni M, Dziubek K, Nobrega MM, Bini R. The role of H-bond in the high-pressure chemistry of model molecules. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2018;30:094001. [PMID: 29345624 DOI: 10.1088/1361-648x/aaa8cf] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
25
Biswas S, Chakraborty D, Mallik BS. Interstitial Voids and Resultant Density of Liquid Water: A First-Principles Molecular Dynamics Study. ACS OMEGA 2018;3:2010-2017. [PMID: 31458509 PMCID: PMC6641304 DOI: 10.1021/acsomega.7b01996] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Accepted: 02/07/2018] [Indexed: 05/31/2023]
26
Espinosa YR, Caffarena ER, Martínez YB, Grigera JR. Pressure effect on micellization of non-ionic surfactant Triton X-100. J Chem Phys 2018;148:074901. [DOI: 10.1063/1.5003358] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]  Open
27
Espinosa YR, Grigera JR, Caffarena ER. Essential dynamics of the cold denaturation: pressure and temperature effects in yeast frataxin. Proteins 2017;85:125-136. [PMID: 27802581 DOI: 10.1002/prot.25205] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2016] [Revised: 10/19/2016] [Accepted: 10/25/2016] [Indexed: 11/09/2022]
28
Evidence of low-density water to high-density water structural transformation in milk during high-pressure processing. INNOV FOOD SCI EMERG 2016. [DOI: 10.1016/j.ifset.2016.10.012] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
29
Knake L, Vondracek H, Havenith M. A novel set-up to investigate the low-frequency spectra of aqueous solutions at high hydrostatic pressure. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2016;87:104101. [PMID: 27802710 DOI: 10.1063/1.4964099] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
30
Lapini A, Pagliai M, Fanetti S, Citroni M, Scandolo S, Bini R, Righini R. Pressure Dependence of Hydrogen-Bond Dynamics in Liquid Water Probed by Ultrafast Infrared Spectroscopy. J Phys Chem Lett 2016;7:3579-3584. [PMID: 27560355 DOI: 10.1021/acs.jpclett.6b01375] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
31
Ranieri U, Giura P, Gorelli FA, Santoro M, Klotz S, Gillet P, Paolasini L, Koza MM, Bove LE. Dynamical Crossover in Hot Dense Water: The Hydrogen Bond Role. J Phys Chem B 2016;120:9051-9. [DOI: 10.1021/acs.jpcb.6b04142] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
32
Amann-Winkel K, Bellissent-Funel MC, Bove LE, Loerting T, Nilsson A, Paciaroni A, Schlesinger D, Skinner L. X-ray and Neutron Scattering of Water. Chem Rev 2016;116:7570-89. [DOI: 10.1021/acs.chemrev.5b00663] [Citation(s) in RCA: 137] [Impact Index Per Article: 17.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
33
Towey JJ, Soper AK, Dougan L. Low-Density Water Structure Observed in a Nanosegregated Cryoprotectant Solution at Low Temperatures from 285 to 238 K. J Phys Chem B 2016;120:4439-48. [DOI: 10.1021/acs.jpcb.6b01185] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
34
Shen B, Wang ZY, Dong F, Guo YR, Zhang RJ, Zheng YX, Wang SY, Wang CZ, Ho KM, Chen LY. Dynamics and Diffusion Mechanism of Low-Density Liquid Silicon. J Phys Chem B 2015;119:14945-51. [PMID: 26540341 DOI: 10.1021/acs.jpcb.5b09138] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
35
Imoto S, Forbert H, Marx D. Water structure and solvation of osmolytes at high hydrostatic pressure: pure water and TMAO solutions at 10 kbar versus 1 bar. Phys Chem Chem Phys 2015;17:24224-37. [DOI: 10.1039/c5cp03069b] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
36
Citroni M, Fanetti S, Guigue B, Bartolini P, Taschin A, Lapini A, Foggi P, Bini R. Picosecond optical parametric generator and amplifier for large temperature-jump. OPTICS EXPRESS 2014;22:30047-30052. [PMID: 25606934 DOI: 10.1364/oe.22.030047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
37
Fanetti S, Pagliai M, Citroni M, Lapini A, Scandolo S, Righini R, Bini R. Connecting the Water Phase Diagram to the Metastable Domain: High-Pressure Studies in the Supercooled Regime. J Phys Chem Lett 2014;5:3804-3809. [PMID: 26278751 DOI: 10.1021/jz501971h] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
38
Woods KN. The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function. BMC BIOPHYSICS 2014;7:8. [PMID: 25184036 PMCID: PMC4143578 DOI: 10.1186/s13628-014-0008-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2014] [Accepted: 08/04/2014] [Indexed: 11/17/2022]
39
Hidalgo Baltasar E, Taravillo M, Sanz PD, Baonza VG, Guignon B. Role of water structure on the high pressure micellization and phase transformations of sodium dodecanoate aqueous solutions. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2014;30:7343-7352. [PMID: 24903603 DOI: 10.1021/la501659x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
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