1
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Kharazmi A, Harrison AW, Shaw MF, Jordan MJT, Kable SH. The Effect of β-Hydrogens on the Tropospheric Photochemistry of Aldehydes: Norrish Type 1, Triple Fragmentation, and Methylketene Formation from Propanal. J Am Chem Soc 2024; 146:21308-21319. [PMID: 39073403 DOI: 10.1021/jacs.4c00877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/30/2024]
Abstract
Wavelength and pressure dependent quantum yields (ϕ, QYs) of propanal photolysis have been measured for photolysis wavelengths, λ = 300-330 nm, and buffer gases of 3-10 Torr propanal and 0-757 Torr N2. Following laser photolysis, three photochemical pathways were established, using Fourier transform infrared spectroscopy of the stable end-products. Photolysis is dominated by the Norrish Type 1 reaction, which has been reported previously, but with inconsistent quantum yields. The propanal α-hydrogen leads to a 4-center elimination of H2, as observed in CH3CHO, here leading to methylketene. The presence of hydrogen attached to the β-carbon allows a new photochemical pathway: concerted triple fragmentation into CO + H2 + C2H4 via a 5-center transition state. Neither of these channels has been reported previously. No evidence for the previously reported C2H6 + CO, C2H4 + H2CO or CH3 + CH2CHO channels, nor for phototautomerization to 1-propenol (CH3CH═CHOH) was found. Modeling of the wavelength, pressure and collision partner dependence of the QYs allows us to reconcile the previous NT1a results and make recommendations for the quantum yields of all three channels under tropospheric conditions. The general impact of β-hydrogen atoms in the photochemistry of aldehydes is to open up new pathways from cyclic transition states and to reduce the importance of other photolysis or isomerization channels.
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Affiliation(s)
- Alireza Kharazmi
- School of Chemistry, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Aaron W Harrison
- School of Chemistry, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Miranda F Shaw
- School of Chemistry, University of Sydney, Sydney, New South Wales 2006, Australia
| | - Meredith J T Jordan
- School of Chemistry, University of Sydney, Sydney, New South Wales 2006, Australia
| | - Scott H Kable
- School of Chemistry, University of New South Wales, Sydney, New South Wales 2052, Australia
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2
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Sharma N, Shastri A, Das AK, Rajasekhar BN. Conformational effects in the vibrational and electronic spectra of propionaldehyde: Experimental and theoretical studies. J Chem Phys 2023; 159:144301. [PMID: 37818998 DOI: 10.1063/5.0169630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 09/19/2023] [Indexed: 10/13/2023] Open
Abstract
We report here investigations on conformational effects in the vibrational and electronic spectra of the propionaldehyde (propanal) molecule using FTIR (600-3200 cm-1) and vacuum ultraviolet (VUV) synchrotron radiation photoabsorption (52 500-85 000 cm-1) spectroscopy respectively. Detailed theoretical calculations (using DFT and TDDFT methodologies) on ground and excited states of the cis and gauche conformers of propanal are performed; a comprehensive spectral analysis of the IR and VUV spectra is presented. A reinvestigation of the IR spectrum reveals several new bands assigned to the gauche conformer based on theoretical calculations. The VUV spectrum exhibits rich Rydberg series structure assigned to ns, np and nd series converging to the first ionization potentials of the two conformers. Earlier assignments of the 3s cis and gauche origins are revised in addition to extending Rydberg series analysis to several higher members. Vibronic bands accompanying the 3s, 4s and 4p Rydberg states are assigned using estimated vibrational frequencies of cis and gauche conformers in the cationic ground state. Simulated potential energy curves of the first few excited states (singlets and triplets) of cis and gauche conformers of propanal help in gaining insights into photodissociation mechanisms and possible conformational effects therein.
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Affiliation(s)
- Neha Sharma
- Atomic & Molecular Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
- Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094, India
| | - Aparna Shastri
- Atomic & Molecular Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
- Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094, India
| | - Asim Kumar Das
- Atomic & Molecular Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
- Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094, India
| | - B N Rajasekhar
- Atomic & Molecular Physics Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
- Homi Bhabha National Institute, Anushaktinagar, Mumbai 400094, India
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3
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Wang Y, Wei J, Cao L, Zhang B, Zhang S. The ultrafast nonradiative processes and photodissociation dynamics investigation of S1 state in propanal. J Chem Phys 2022; 156:074306. [DOI: 10.1063/5.0077490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Yanmei Wang
- Atomic and Molecular Physics, Innovation Academy for Precision Measurement Science and Technology CAS, China
| | - Jie Wei
- Wuhan Institute of Physics and Mathematics Chinese Academy of Sciences, China
| | - Ling Cao
- Innovation Academy for Precision Measurement Science and Technology CAS, China
| | - Bing Zhang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics Chinese Academy of Sciences, China
| | - Song Zhang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics Chinese Academy of Sciences, China
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4
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Roaming dynamics of the H+C 2D 2 reaction on a fundamental-invariant neural network potential energy surface. CHINESE J CHEM PHYS 2022. [DOI: 10.1063/1674-0068/cjcp2111249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
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5
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Analysis of the roaming trajectories from the dynamic and kinematic perspectives – A representative study of triatomic systems. Chem Phys Lett 2021. [DOI: 10.1016/j.cplett.2021.138599] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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6
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Fu YL, Bai Y, Han YC, Fu B, Zhang DH. Double-Roaming Dynamics in the H + C 2H 2 → H 2 + C 2H Reaction: Acetylene-Facilitated Roaming and Vinylidene-Facilitated Roaming. J Phys Chem Lett 2021; 12:4211-4217. [PMID: 33900762 DOI: 10.1021/acs.jpclett.1c01045] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
We report two novel roaming pathways for the H + C2H2 → H2 + C2H reaction by performing extensive quasiclassical trajectory calculations on a new, global, high-level machine learning-based potential energy surface. One corresponds to the acetylene-facilitated roaming pathway, where the H atom turns back from the acetylene + H channel and abstracts another H atom from acetylene. The other is the vinylidene-facilitated roaming, where the H atom turns back from the vinylidene + H channel and abstracts another H from vinylidene. The "double-roaming" pathways account for roughly 95% of the total cross section of the H2 + C2H products at the collision energy of 70 kcal/mol. These computational results give valuable insights into the significance of the two isomers (acetylene and vinylidene) in chemical reaction dynamics and also the experimental search for roaming dynamics in this bimolecular reaction.
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Affiliation(s)
- Yan-Lin Fu
- School of Physics, Dalian University of Technology, Dalian, China116024
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China 116023
| | - Yuyao Bai
- School of Physics, Dalian University of Technology, Dalian, China116024
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China 116023
| | - Yong-Chang Han
- School of Physics, Dalian University of Technology, Dalian, China116024
| | - Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China 116023
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China 116023
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7
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Palazzetti F, Tsai PY. Photodissociation Dynamics of CO-Forming Channels on the Ground-State Surface of Methyl Formate at 248 nm: Direct Dynamics Study and Assessment of Generalized Multicenter Impulsive Models. J Phys Chem A 2021; 125:1198-1220. [PMID: 33507759 DOI: 10.1021/acs.jpca.0c10464] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
The photodissociation dynamics of methyl formate in the electronic ground state S0, initiated by a 248 nm-wavelength laser, is studied by direct dynamics simulations. We analyze five channels, where four of them have as products CH3OH + CO, one leading to the formation of three fragments, H2CO + H2 + CO, and a channel characterized by a roaming transition state. The analysis of energy distribution among the degrees of freedom of the product and the comparison with experimental results previously published by other groups provide the ingredients to distinguish the examined dissociation pathways. The interpretation of the results proves that the characterization of dissociation mechanisms must rely on a dynamics approach involving multiple electronic states, including considerations on the features of the S1/S0 conical intersection. Here, we also assess the generalized multicenter impulsive model, GMCIM, that has been designed for dissociation processes with exit barriers, and the energy distribution in the products is predicted on the basis of information from the saddle points and the intrinsic reaction coordinates. Main features, advantages, limits, and future perspectives of the method are reported and discussed.
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Affiliation(s)
- Federico Palazzetti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, Perugia 06123, Italy
| | - Po-Yu Tsai
- Department of Chemistry, National Chung Hsing University, Taichung 402, Taiwan
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8
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Lin KC, Muthiah B, Chang HP, Kasai T, Chang YP. Halogen-related photodissociation in atmosphere: characterisation of atomic halogen, molecular halogen, and hydrogen halide. INT REV PHYS CHEM 2020. [DOI: 10.1080/0144235x.2020.1822590] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- King-Chuen Lin
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, Taiwan
| | | | - Hsiu-Pu Chang
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
| | - Toshio Kasai
- Department of Chemistry, National Taiwan University, Taipei, Taiwan
- Institute of Scientific and Industrial Research, Osaka University, Osaka, Japan
| | - Yuan-Pin Chang
- Department of Chemistry, National Sun Yat-sen University, Kaohsiung, Taiwan
- Aerosol Science Research Center, National Sun Yat-sen University, Kaohsiung, Taiwan
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung, Taiwan
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9
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Abstract
Roaming reactions were first clearly identified in photodissociation of formaldehyde 15 years ago, and roaming dynamics are now recognized as a universal aspect of chemical reactivity. These reactions typically involve frustrated near-dissociation of a quasibound system to radical fragments, followed by reorientation at long range and intramolecular abstraction. The consequences can be unexpected formation of molecular products, depletion of the radical pool in chemical systems, and formation of products with unusual internal state distributions. In this review, I examine some current aspects of roaming reactions with an emphasis on experimental results, focusing on possible quantum effects in roaming and roaming dynamics in bimolecular systems. These considerations lead to a more inclusive definition of roaming reactions as those for which key dynamics take place at long range.
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Affiliation(s)
- Arthur G. Suits
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, USA
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10
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Roaming Dynamics and Conformational Memory in Photolysis of Formic Acid at 193 nm Using Time-resolved Fourier-transform Infrared Emission Spectroscopy. Sci Rep 2020; 10:4769. [PMID: 32179782 PMCID: PMC7075954 DOI: 10.1038/s41598-020-61642-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Accepted: 11/28/2019] [Indexed: 11/09/2022] Open
Abstract
In photodissociation of trans-formic acid (HCOOH) at 193 nm, we have observed two molecular channels of CO + H2O and CO2 + H2 by using 1 μs-resolved Fourier-transform infrared emission spectroscopy. With the aid of spectral simulation, the CO spectra are rotationally resolved for each vibrational state (v = 1-8). Each of the resulting vibrational and rotational population distributions is characteristic of two Boltzmann profiles with different temperatures, originating from either transition state pathway or OH-roaming to form the same CO + H2O products. The H2O roaming co-product is also spectrally simulated to understand the interplay with the CO product in the internal energy partitioning. Accordingly, this work has evaluated the internal energy disposal for the CO and H2O roaming products; especially the vibrational-state dependence of the roaming signature is reported for the first time. Further, given a 1 μs resolution, the temporal dependence of the CO/CO2 product ratio at v ≥ 1 rises from 3 to 10 of study, thereby characterizing the effect of conformational memory and well reconciling with the disputed results reported previously between absorption and emission methods.
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11
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Fu YL, Lu X, Han YC, Fu B, Zhang DH, Bowman JM. Collision-induced and complex-mediated roaming dynamics in the H + C 2H 4 → H 2 + C 2H 3 reaction. Chem Sci 2020; 11:2148-2154. [PMID: 34123304 PMCID: PMC8150095 DOI: 10.1039/c9sc05951b] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Roaming is a novel mechanism in reaction dynamics. It describes an unusual pathway, which can be quite different from the conventional minimum-energy path, leading to products. While roaming has been reported or suggested in a number of unimolecular reactions, it has been rarely reported for bimolecular reactions. Here, we report a high-level computational study of roaming dynamics in the important bimolecular combustion reaction H + C2H4 → H2 + C2H3, using a new, high-level machine learning-based potential energy surface. In addition to the complex-mediated roaming mechanism, a non-complex forming roaming mechanism is found. It can be described as a direct inelastic collision where the departing H atom roams and then abstracts an H atom. We denoted this as “collision-induced” roaming. These two roaming mechanisms have different angular distributions; however, both produce highly internally excited C2H3. The roaming pathway leads to remarkably different dynamics as compared with the direct abstraction pathway. A clear signature of the roaming mechanism is highly internally excited C2H3, which could be observed experimentally. Collision-induced and complex-mediated roaming mechanisms are revealed for an important bimolecular reaction in combustion.![]()
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Affiliation(s)
- Yan-Lin Fu
- Department of Physics, Dalian University of Technology Dalian China 116024 .,State Key Laboratory of Molecular Reaction Dynamics, Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian China 116023
| | - Xiaoxiao Lu
- State Key Laboratory of Molecular Reaction Dynamics, Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian China 116023
| | - Yong-Chang Han
- Department of Physics, Dalian University of Technology Dalian China 116024
| | - Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics, Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian China 116023
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences Dalian China 116023
| | - Joel M Bowman
- Department of Chemistry, Cherry L. Emerson Center for Scientific Computation, Emory University Atlanta Georgia 30322 USA
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12
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Ma Y, Liu J, Li F, Wang F, Kitsopoulos TN. Roaming Dynamics in the Photodissociation of Formic Acid at 230 nm. J Phys Chem A 2019; 123:3672-3677. [PMID: 30969120 DOI: 10.1021/acs.jpca.9b00724] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Roaming dynamics is observed in the photodissociation of formic acid (HCOOH) at 230 nm by using the slice imaging method. In combination with rotational state selective (2 + 1) resonance-enhanced multiphoton ionization of the CO fragments, the speed distributions of the CO fragments exhibit a low recoil velocity at low rotational levels of J = 9 and 20, while the velocity distributions of CO at high rotational levels of J = 30 and 48 show a relatively large recoil velocity. The experimental results indicate that the roaming of OH radical should be related with the formation of CO + H2O channel at the present photolysis energy. Unlike the roaming pathways occurring in H2CO that can be described by loose flat potential, our CO speed distribution analysis suggests the presence of a "tight" flat potential in the roaming dynamics of HCOOH molecules.
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Affiliation(s)
- Yujie Ma
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Jiaxing Liu
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Fangfang Li
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Fengyan Wang
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Theofanis N Kitsopoulos
- Department of Dynamics at Surfaces, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany; Institute of Electronic Structure and Laser, FORTH, Heraklion, Greece; Department of Chemistry , University of Crete , Heraklion , Greece
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13
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Lin KC, Tsai PY, Chao MH, Nakamura M, Kasai T, Lombardi A, Palazzetti F, Aquilanti V. Roaming signature in photodissociation of carbonyl compounds. INT REV PHYS CHEM 2018. [DOI: 10.1080/0144235x.2018.1488951] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- King-Chuen Lin
- Department of Chemistry, National Taiwan University, Taipei, Taiwan (ROC)
- Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei, Taiwan (ROC)
| | - Po-Yu Tsai
- Department of Chemistry, National Chung-Hsing University, Taichung, Taiwan (ROC)
| | - Meng-Hsuan Chao
- Department of Chemistry, National Taiwan University, Taipei, Taiwan (ROC)
| | - Masaaki Nakamura
- Department of Chemistry, National Taiwan University, Taipei, Taiwan (ROC)
| | - Toshio Kasai
- Department of Chemistry, National Taiwan University, Taipei, Taiwan (ROC)
- Institute of Scientific and Industrial Research, Osaka University, Osaka, Japan
| | - Andrea Lombardi
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, Italy
- Consortium for Computational Molecular and Materials Sciences (CMS)2, Perugia, Italy
| | - Federico Palazzetti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, Italy
- Scuola Normale Superiore di Pisa, Pisa, Italy
| | - Vincenzo Aquilanti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Perugia, Italy
- Istituto di Struttura della Materia, Consiglio Nazionale delle Ricerche, Rome, Italy
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14
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Tsai PY. A generalized unimolecular impulsive model for curved reaction path. J Chem Phys 2018; 148:234101. [PMID: 29935512 DOI: 10.1063/1.5030488] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
This work aims to introduce a generalized impulsive model for unimolecular dissociation processes. This model allows us to take into account the curvature of the reaction path explicitly. It is a generalization of the previously developed multi-center impulsive model [P.-Y. Tsai and K.-C. Lin, J. Phys. Chem. A 119, 29 (2015)]. Several limitations of conventional impulsive models are eliminated by this study: (1) Unlike conventional impulsive models, in which a single molecular geometry is responsible for the impulse determination, the gradients on the whole dissociation path are taken into account. The model can treat dissociation pathways with large curvatures and loose saddle points. (2) The method can describe the vibrational excitation of polyatomic fragments due to the bond formation by multi-center impulse. (3) The available energy in conventional impulsive models is separated into uncoupled statistical and impulsive energy reservoirs, while the interplay between these reservoirs is allowed in the new model. (4) The quantum state correlation between fragments can be preserved in analysis. Dissociations of several molecular systems including the roaming pathways of formaldehyde, nitrate radical, acetaldehyde, and glyoxal are chosen as benchmarks. The predicted photofragment energy and vector distributions are consistent with the experimental results reported previously. In these examples, the capability of the new model to treat the curved dissociation path, loose saddle points, polyatomic fragments, and multiple-body dissociation is verified. As a cheaper computational tool with respect to ab initio on-the-fly direct dynamic simulations, this model can provide detailed information on the energy disposal, quantum state correlation, and stereodynamics in unimolecular dissociation processes.
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Affiliation(s)
- Po-Yu Tsai
- Department of Chemistry, National Chung Hsing University, Taichung 402, Taiwan
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15
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Kasai T, Che DC, Tsai PY, Nakamura M, Muthiah B, Lin KC. Roaming and chaotic behaviors in collisional and photo-initiated molecular-beam reactions: a role of classical vs. quantum nonadiabatic dynamics. RENDICONTI LINCEI. SCIENZE FISICHE E NATURALI 2018. [DOI: 10.1007/s12210-018-0709-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Harrison AW, Kable SH. Photodissociation dynamics of propanal and isobutanal: The Norrish Type I pathway. J Chem Phys 2018; 148:164308. [DOI: 10.1063/1.5019383] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Aaron W. Harrison
- School of Chemistry, University of New South Wales, New South Wales 2052, Australia
| | - Scott H. Kable
- School of Chemistry, University of New South Wales, New South Wales 2052, Australia
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17
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Han YC, Tsai PY, Bowman JM, Lin KC. Photodissociation of CH 3CHO at 248 nm: identification of the channels of roaming, triple fragmentation and the transition state. Phys Chem Chem Phys 2018; 19:18628-18634. [PMID: 28692092 DOI: 10.1039/c7cp02952g] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Quasi-classical trajectory (QCT) calculations are performed on the molecular products CO + CH4via the tight transition state (TS) and global minimum configurations. With the aid of this theoretical evidence, we have re-examined the experimental results published previously to clarify the controversial issue of photodissociation dynamics of CH3CHO at 248 nm. For the CO (v = 0 and 1) bimodal rotational distributions obtained previously [K.-C. Hung, P.-Y. Tsai, H.-K. Li, and K.-C. Lin, J. Chem. Phys., 2014, 140, 064313], the low-rotational (J) component is re-assigned to the contribution of triple fragmentation (H + CO + CH3), whereas the high-J component is ascribed to the CH3-roaming pathway. The H-roaming pathway is not found in the calculations. Further, the QCT results have confirmed that the CO vibrational population especially at higher states and the low-energy component of CH4 vibrational bimodality obtained experimentally are mainly produced following the TS pathway, which has never been identified before. While taking into account both the theoretical and experimental results, the ratio of the molecular products (CO(v = 1) + CH4) obtained by the triple fragmentation/roaming/TS processes is evaluated to be 0.23 : 1 : 0.29.
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Affiliation(s)
- Yong-Chang Han
- Department of Physics, Dalian University of Technology, Dalian, P. R. China.
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18
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Carpenter BK, Ezra GS, Farantos SC, Kramer ZC, Wiggins S. Empirical Classification of Trajectory Data: An Opportunity for the Use of Machine Learning in Molecular Dynamics. J Phys Chem B 2017; 122:3230-3241. [PMID: 28968092 DOI: 10.1021/acs.jpcb.7b08707] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Classical Hamiltonian trajectories are initiated at random points in phase space on a fixed energy shell of a model two degrees of freedom potential, consisting of two interacting minima in an otherwise flat energy plane of infinite extent. Below the energy of the plane, the dynamics are demonstrably chaotic. However, most of the work in this paper involves trajectories at a fixed energy that is 1% above that of the plane, in which regime the dynamics exhibit behavior characteristic of chaotic scattering. The trajectories are analyzed without reference to the potential, as if they had been generated in a typical direct molecular dynamics simulation. The questions addressed are whether one can recover useful information about the structures controlling the dynamics in phase space from the trajectory data alone, and whether, despite the at least partially chaotic nature of the dynamics, one can make statistically meaningful predictions of trajectory outcomes from initial conditions. It is found that key unstable periodic orbits, which can be identified on the analytical potential, appear by simple classification of the trajectories, and that the specific roles of these periodic orbits in controlling the dynamics are also readily discerned from the trajectory data alone. Two different approaches to predicting trajectory outcomes from initial conditions are evaluated, and it is shown that the more successful of them has ∼90% success. The results are compared with those from a simple neural network, which has higher predictive success (97%) but requires the information obtained from the "by-hand" analysis to achieve that level. Finally, the dynamics, which occur partly on the very flat region of the potential, show characteristics of the much-studied phenomenon called "roaming." On this potential, it is found that roaming trajectories are effectively "failed" periodic orbits and that angular momentum can be identified as a key controlling factor, despite the fact that it is not a strictly conserved quantity. It is also noteworthy that roaming on this potential occurs in the absence of a "roaming saddle," which has previously been hypothesized to be a necessary feature for roaming to occur.
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Affiliation(s)
- Barry K Carpenter
- School of Chemistry , Cardiff University , Cardiff CF10 3AT , United Kingdom
| | - Gregory S Ezra
- Department of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853-1301 , United States
| | - Stavros C Farantos
- Institute of Electronic Structure and Laser, Foundation for Research and Technology - Hellas, and Department of Chemistry , University of Crete , Iraklion 711 10 , Greece
| | - Zeb C Kramer
- Department of Chemistry and Biochemistry , La Salle University , 1900 West Olney Avenue , Philadelphia , Pennsylvania 19141 , United States
| | - Stephen Wiggins
- School of Mathematics , University of Bristol , Bristol BS8 1TW , United Kingdom
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19
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Roaming mediated nonadiabatic dynamics in molecular hydrogen elimination from propane at 157 nm. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.08.057] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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20
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Coutinho ND, Aquilanti V, Silva VHC, Camargo AJ, Mundim KC, de Oliveira HCB. Stereodirectional Origin of anti-Arrhenius Kinetics for a Tetraatomic Hydrogen Exchange Reaction: Born-Oppenheimer Molecular Dynamics for OH + HBr. J Phys Chem A 2016; 120:5408-17. [PMID: 27205872 DOI: 10.1021/acs.jpca.6b03958] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Among four-atom processes, the reaction OH + HBr → H2O + Br is one of the most studied experimentally: its kinetics has manifested an unusual anti-Arrhenius behavior, namely, a marked decrease of the rate constant as the temperature increases, which has intrigued theoreticians for a long time. Recently, salient features of the potential energy surface have been characterized and most kinetic aspects can be considered as satisfactorily reproduced by classical trajectory simulations. Motivation of the work reported in this paper is the investigation of the stereodirectional dynamics of this reaction as the prominent reason for the peculiar kinetics: we started in a previous Letter ( J. Phys. Chem. Lett. 2015 , 6 , 1553 - 1558 ) a first-principles Born-Oppenheimer "canonical" molecular dynamics approach. Trajectories are step-by-step generated on a potential energy surface quantum mechanically calculated on-the-fly and are thermostatically equilibrated to correspond to a specific temperature. Here, refinements of the method permitted a major increase of the number of trajectories and the consideration of four temperatures -50, +200, +350, and +500 K, for which the sampling of initial conditions allowed us to characterize the stereodynamical effect. The role is documented of the adjustment of the reactants' mutual orientation to encounter the entrance into the "cone of acceptance" for reactivity. The aperture angle of this cone is dictated by a range of directions of approach compatible with the formation of the specific HOH angle of the product water molecule; and consistently the adjustment is progressively less effective the higher the kinetic energy. Qualitatively, this emerging picture corroborates experiments on this reaction, involving collisions of aligned and oriented molecular beams, and covering a range of energies higher than the thermal ones. The extraction of thermal rate constants from this molecular dynamics approach is discussed and the systematic sampling of the canonical ensemble is indicated as needed for quantitative comparison with the kinetic experiments.
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Affiliation(s)
- Nayara D Coutinho
- Instituto de Química, Universidade de Brasília , 4478, 70904-970 Brasília, Brazil
| | - Vincenzo Aquilanti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia , Via Elce di Sotto 8, 06123, Perugia, Italy.,Instituto de Física, Universidade Federal da Bahia , 40210 Salvador, Brazil.,Istituto di Struttura della Materia, Consiglio Nazionale delle Ricerche , 00016 Rome, Italy
| | - Valter H C Silva
- Grupo de Química Teórica e Estrutural de Anápolis, Ciências Exatas e Tecnológicas, Universidade Estadual de Goiás , 0459, 75001-970 Anápolis, GO Brazil
| | - Ademir J Camargo
- Grupo de Química Teórica e Estrutural de Anápolis, Ciências Exatas e Tecnológicas, Universidade Estadual de Goiás , 0459, 75001-970 Anápolis, GO Brazil
| | - Kleber C Mundim
- Instituto de Química, Universidade de Brasília , 4478, 70904-970 Brasília, Brazil
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21
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Lombardi A, Palazzetti F, Aquilanti V, Li HK, Tsai PY, Kasai T, Lin KC. Rovibrationally Excited Molecules on the Verge of a Triple Breakdown: Molecular and Roaming Mechanisms in the Photodecomposition of Methyl Formate. J Phys Chem A 2016; 120:5155-62. [DOI: 10.1021/acs.jpca.6b00723] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Andrea Lombardi
- Dipartimento
di Chimica, Biologia e Biotecnologie, Università di Perugia, Via Elce
di Sotto 8, 06123 Perugia, Italy
| | - Federico Palazzetti
- Dipartimento
di Chimica, Biologia e Biotecnologie, Università di Perugia, Via Elce
di Sotto 8, 06123 Perugia, Italy
| | - Vincenzo Aquilanti
- Dipartimento
di Chimica, Biologia e Biotecnologie, Università di Perugia, Via Elce
di Sotto 8, 06123 Perugia, Italy
- Istituto
di Struttura della Materia, Consiglio Nazionale delle Ricerche, Rome, Italy
- Instituto
de Fisica, Universidade Federal da Bahia, Salvador, Brazil
| | - Hou-Kuan Li
- Department
of Chemistry, National Taiwan University, Taipei 106, Taiwan
| | - Po-Yu Tsai
- Department
of Chemistry, National Taiwan University, Taipei 106, Taiwan
| | - Toshio Kasai
- Department
of Chemistry, National Taiwan University, Taipei 106, Taiwan
| | - King-Chuen Lin
- Department
of Chemistry, National Taiwan University, Taipei 106, Taiwan
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22
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Lin KC. Regulation of nonadiabatic processes in the photolysis of some carbonyl compounds. Phys Chem Chem Phys 2016; 18:6980-95. [DOI: 10.1039/c5cp07012k] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An energy scheme involving So → S1 excitation, followed by dissociation channels via diabatic coupling, internal conversion, transition state and roaming mechanisms.
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Affiliation(s)
- King-Chuen Lin
- Department of Chemistry
- National Taiwan University
- Taipei 106
- Taiwan
- Institute of Atomic and Molecular Sciences
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23
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24
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Nakamura M, Tsai PY, Kasai T, Lin KC, Palazzetti F, Lombardi A, Aquilanti V. Dynamical, spectroscopic and computational imaging of bond breaking in photodissociation: roaming and role of conical intersections. Faraday Discuss 2015; 177:77-98. [PMID: 25625792 DOI: 10.1039/c4fd00174e] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Recent experimental and theoretical advances in the study of the dissociation of excited molecules are revealing unexpected mechanisms, when their outcomes are tackled by combining (i) space-time ion imaging of translational features, with (ii) spectroscopic probing of rotational and vibrational distributions; crucial is the assistance of (iii) the quantum chemistry of structural investigations of rearrangements of chemical bonds, and of (iv) the simulations of molecular dynamics to follow the evolution of selective bond stretching and breaking. Here we present results of such an integrated approach to methyl formate, HCOOCH3, the simplest of esters; the main focus is on the rotovibrationally excited CO (v=1) product and in general on the energy distribution in the fragments. Previous laser studies of dissociation into CO and CH3OH at a sequence of various wavelengths discovered signatures of a roaming mechanism by the late arrival of CO (v=0) products in time-of-flight ion imaging. Subsequent detailed investigations as a function of excitation energy provided the assessment of the threshold, which opens for triple breakdown into CO and further fragments H and CH3O, as spectroscopically characterized by ion imaging and FTIR respectively. Accompanying quantum mechanical electronic structure calculations and classical molecular dynamics simulations clarify the origin of these fragments through "roaming" pathways involving incipient radical intermediates at energies below the triple fragmentation threshold: a specific role is played by nonadiabatic transitions at a conical intersection between ground and excited states; alternative pathways focalize our attention to regions of the potential energy surfaces other than those in the neighbourhoods of saddle points along minimum energy paths: eventually this leads us to look for avenues in reaction kinetics beyond those of venerable transition state theories.
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Affiliation(s)
- Masaaki Nakamura
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan.
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25
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Li HK, Tsai PY, Hung KC, Kasai T, Lin KC. Communication: Photodissociation of CH3CHO at 308 nm: Observation of H-roaming, CH3-roaming, and transition state pathways together along the ground state surface. J Chem Phys 2015; 142:041101. [DOI: 10.1063/1.4906457] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hou-Kuan Li
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
| | - Po-Yu Tsai
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
| | - Kai-Chan Hung
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
| | - Toshio Kasai
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
| | - King-Chuen Lin
- Department of Chemistry, National Taiwan University, Taipei 106, Taiwan and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
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26
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Tsai PY, Lin KC. Insight into photofragment vector correlation by a multi-center impulsive model. Phys Chem Chem Phys 2015; 17:19592-601. [DOI: 10.1039/c5cp03079j] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A multi-center impulsive model has been recently developed to characterize the dynamic feature of fragment vector correlation in photodissociation of formaldehyde, H2CO → CO + H2, via both transition state and roaming pathways.
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Affiliation(s)
- Po-Yu Tsai
- Department of Chemistry
- National Chung Hsing University
- Taichung 402
- Taiwan
| | - King-Chuen Lin
- Department of Chemistry
- National Taiwan University
- and Institute of Atomic and Molecular Sciences
- Taipei 106
- Taiwan
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27
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Tsai PY, Li HK, Kasai T, Lin KC. Roaming as the dominant mechanism for molecular products in the photodissociation of large aliphatic aldehydes. Phys Chem Chem Phys 2015; 17:23112-20. [DOI: 10.1039/c5cp03408f] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photodissociation of isobutyraldehyde (C3H7CHO) at 248 nm is investigated using time-resolved Fourier-transform infrared emission spectroscopy to demonstrate the growing importance of the roaming pathway with increasing molecular size of aliphatic aldehydes.
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Affiliation(s)
- Po-Yu Tsai
- Department of Chemistry
- National Chung Hsing University
- Taichung 402
- Taiwan
| | - Hou-Kuan Li
- Department of Chemistry
- National Taiwan University
- and Institute of Atomic and Molecular Sciences
- Academia Sinica
- Taipei 106
| | - Toshio Kasai
- Department of Chemistry
- National Taiwan University
- and Institute of Atomic and Molecular Sciences
- Academia Sinica
- Taipei 106
| | - King-Chuen Lin
- Department of Chemistry
- National Taiwan University
- and Institute of Atomic and Molecular Sciences
- Academia Sinica
- Taipei 106
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28
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Tsai PY, Lin KC. Insight into the Photodissociation Dynamical Feature of Conventional Transition State and Roaming Pathways by an Impulsive Model. J Phys Chem A 2014; 119:29-38. [DOI: 10.1021/jp511000t] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Po-Yu Tsai
- Department
of Chemistry, National Taiwan University, and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
| | - King-Chuen Lin
- Department
of Chemistry, National Taiwan University, and Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan
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29
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Affiliation(s)
- Joel M. Bowman
- Department of Chemistry, Emory University, Atlanta, GA, USA
- Cherry L. Emerson Center for Scientific Computation, Emory University, Atlanta, GA, USA
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30
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Tsai PY, Chao MH, Kasai T, Lin KC, Lombardi A, Palazzetti F, Aquilanti V. Roads leading to roam. Role of triple fragmentation and of conical intersections in photochemical reactions: experiments and theory on methyl formate. Phys Chem Chem Phys 2014; 16:2854-65. [DOI: 10.1039/c3cp53792g] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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