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Cerney JP, Raskovalov A, Nasseri M, Silva MD, McReynolds KD. Synthesis and Nuclear Magnetic Resonance Structural Evaluation of Oxime-Linked Oligosialic Acid-Based Glycodendrimers. Biomacromolecules 2023; 24:1901-1911. [PMID: 36989087 PMCID: PMC10091409 DOI: 10.1021/acs.biomac.3c00105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023]
Abstract
A series of four oxime-linked octavalent sialic acid and oligosialic acid poly(ether amidoamine) glycodendrimers were synthesized. In the attachment of the sialic acids to the dendrimer core, chemoselective oxime bonds were formed between the unprotected sugars (sialic acid or α-2,8-linked di- through tetra-sialic acids) and the aminooxy-terminated dendrimer core in a microwave-mediated reaction, resulting in good to excellent yields (58-100%) of the fully functionalized octavalent glycodendrimers. Next, using a combination of 1D and 2D nuclear magnetic resonance and working from the inside outward, we employed a systematic method to assign the proton and carbon signals starting with the smallest linkers and dendrimer cores and moving gradually up to the completed octavalent glycodendrimers. Through this approach, the assignment of the protons and carbons was possible, including the E- and Z-isomers related to the oxime dendrimer to sugar connections and relative quantities of each. These glycodendrimers were designed as broad-spectrum inhibitors of viral pathogens.
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Affiliation(s)
- James P Cerney
- Department of Chemistry, California State University, Sacramento 6000 J Street, Sacramento, California 95819-6057, United States
| | - Aleksey Raskovalov
- Department of Chemistry, California State University, Sacramento 6000 J Street, Sacramento, California 95819-6057, United States
| | - Monica Nasseri
- Department of Chemistry, California State University, Sacramento 6000 J Street, Sacramento, California 95819-6057, United States
| | - Madeline D Silva
- Department of Chemistry, California State University, Sacramento 6000 J Street, Sacramento, California 95819-6057, United States
| | - Katherine D McReynolds
- Department of Chemistry, California State University, Sacramento 6000 J Street, Sacramento, California 95819-6057, United States
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2
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Novel series of 1,2,3-triazolyl-acetamide scaffolds: Synthesis, biological activity and computational molecular modeling. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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3
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Krabicová I, Dolenský B, Řezanka M. Selectivity of 1- O-Propargyl-d-Mannose Preparations. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27051483. [PMID: 35268584 PMCID: PMC8911549 DOI: 10.3390/molecules27051483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 02/15/2022] [Accepted: 02/18/2022] [Indexed: 11/16/2022]
Abstract
Thanks to their ability to bind to specific biological receptors, mannosylated structures are examined in biomedical applications. One of the most common ways of linking a functional moiety to a structure is to use an azide-alkyne click reaction. Therefore, it is necessary to prepare and isolate a propargylated mannose derivative of high purity to maintain its bioactivity. Three known preparations of propargyl-α-mannopyranoside were revisited, and products were analysed by NMR spectroscopy. The preparations were shown to yield by-products that have not been described in the literature yet. Our experiments showed that one-step procedures could not provide pure propargyl-α-mannopyranoside, while a three-step procedure yielded the desired compound of high purity.
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Affiliation(s)
- Ilona Krabicová
- Department of Chemistry, Faculty of Science, Humanities and Education, Technical University of Liberec, Studentská 1402/2, 46117 Liberec, Czech Republic;
| | - Bohumil Dolenský
- Department of Analytical Chemistry, Faculty of Chemical Engineering, University of Chemistry and Technology Prague, Technická 5, 16628 Prague, Czech Republic;
| | - Michal Řezanka
- Department of Nanochemistry, Institute for Nanomaterials, Advanced Technologies and Innovation, Technical University of Liberec, Studentská 1402/2, 46117 Liberec, Czech Republic
- Correspondence:
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4
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Goyard D, Roubinet B, Vena F, Landemarre L, Renaudet O. Homo- and Heterovalent Neoglycoproteins as Ligands for Bacterial Lectins. Chempluschem 2021; 87:e202100481. [PMID: 34931469 DOI: 10.1002/cplu.202100481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Revised: 12/03/2021] [Indexed: 11/11/2022]
Abstract
Click chemistry gives access to unlimited set of multivalent glycoconjugates to explore carbohydrate-protein interactions and discover high affinity ligands. In this study, we have created supramolecular systems based on a carrier protein that was grafted by Cu(I)-catalyzed azide-alkyne cycloaddition with tetravalent glycodendrons presenting αGal, βGal and/or αFuc. Binding studies of the homo- (4 a-c) and heterovalent (5) neoglycoproteins (neoGPs) with the LecA and LecB lectins from P. aeruginosa has first confirmed the interest of the multivalent presentation of glycodendrons by the carrier protein (IC50 up to 2.8 nM). Moreover, these studies have shown that the heterovalent display of glycans (5) allows the interaction with both lectins (IC50 of 10 nM) despite the presence of unspecific moieties, and even with similar efficiency for LecB. These results demonstrate the potential of multivalent and multispecific neoGPs as a promising strategy to fight against resistant pathogens.
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Affiliation(s)
- David Goyard
- Univ. Grenoble Alpes, CNRS, DCM UMR 5250, 38000, Grenoble, France
| | | | | | | | - Olivier Renaudet
- Univ. Grenoble Alpes, CNRS, DCM UMR 5250, 38000, Grenoble, France
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5
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Almeida‐Marrero V, Mascaraque M, Jesús Vicente‐Arana M, Juarranz Á, Torres T, de la Escosura A. Tuning the Nanoaggregates of Sialylated Biohybrid Photosensitizers for Intracellular Activation of the Photodynamic Response. Chemistry 2021; 27:9634-9642. [PMID: 33834569 PMCID: PMC8360122 DOI: 10.1002/chem.202100681] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Indexed: 01/18/2023]
Abstract
In the endeavor of extending the clinical use of photodynamic therapy (PDT) for the treatment of superficial cancers and other neoplastic diseases, deeper knowledge and control of the subcellular processes that determine the response of photosensitizers (PS) are needed. Recent strategies in this direction involve the use of activatable and nanostructured PS. Here, both capacities have been tuned in two dendritic zinc(II) phthalocyanine (ZnPc) derivatives, either asymmetrically or symmetrically substituted with 3 and 12 copies of the carbohydrate sialic acid (SA), respectively. Interestingly, the amphiphilic ZnPc-SA biohybrid (1) self-assembles into well-defined nanoaggregates in aqueous solution, facilitating cellular internalization and transport whereas the PS remains inactive. Within the cells, these nanostructured hybrids localize in the lysosomes, as usually happens for anionic and hydrophilic aggregated PS. Yet, in contrast to most of them (e. g., compound 2), hybrid 1 recovers the capacity for photoinduced ROS generation within the target organelles due to its amphiphilic character; this allows disruption of aggregation when the compound is inserted into the lysosomal membrane, with the concomitant highly efficient PDT response.
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Affiliation(s)
- Verónica Almeida‐Marrero
- Department of Organic Chemistry / SIdI (MJVA)Universidad Autónoma de MadridCampus de Cantoblanco28049MadridSpain
| | - Marta Mascaraque
- Departamento de BiologíaUniversidad Autónoma de MadridCampus de Cantoblanco28049MadridSpain
- Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS)28034MadridSpain
| | - María Jesús Vicente‐Arana
- Department of Organic Chemistry / SIdI (MJVA)Universidad Autónoma de MadridCampus de Cantoblanco28049MadridSpain
| | - Ángeles Juarranz
- Departamento de BiologíaUniversidad Autónoma de MadridCampus de Cantoblanco28049MadridSpain
- Instituto Ramón y Cajal de Investigaciones Sanitarias (IRYCIS)28034MadridSpain
| | - Tomás Torres
- Department of Organic Chemistry / SIdI (MJVA)Universidad Autónoma de MadridCampus de Cantoblanco28049MadridSpain
- Institute for Advanced Research in Chemistry (IAdChem)Campus de Cantoblanco28049MadridSpain
- IMDEA NanoscienceCampus de Cantoblanco28049MadridSpain
| | - Andrés de la Escosura
- Department of Organic Chemistry / SIdI (MJVA)Universidad Autónoma de MadridCampus de Cantoblanco28049MadridSpain
- Institute for Advanced Research in Chemistry (IAdChem)Campus de Cantoblanco28049MadridSpain
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6
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Agrahari AK, Bose P, Jaiswal MK, Rajkhowa S, Singh AS, Hotha S, Mishra N, Tiwari VK. Cu(I)-Catalyzed Click Chemistry in Glycoscience and Their Diverse Applications. Chem Rev 2021; 121:7638-7956. [PMID: 34165284 DOI: 10.1021/acs.chemrev.0c00920] [Citation(s) in RCA: 134] [Impact Index Per Article: 44.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Copper(I)-catalyzed 1,3-dipolar cycloaddition between organic azides and terminal alkynes, commonly known as CuAAC or click chemistry, has been identified as one of the most successful, versatile, reliable, and modular strategies for the rapid and regioselective construction of 1,4-disubstituted 1,2,3-triazoles as diversely functionalized molecules. Carbohydrates, an integral part of living cells, have several fascinating features, including their structural diversity, biocompatibility, bioavailability, hydrophilicity, and superior ADME properties with minimal toxicity, which support increased demand to explore them as versatile scaffolds for easy access to diverse glycohybrids and well-defined glycoconjugates for complete chemical, biochemical, and pharmacological investigations. This review highlights the successful development of CuAAC or click chemistry in emerging areas of glycoscience, including the synthesis of triazole appended carbohydrate-containing molecular architectures (mainly glycohybrids, glycoconjugates, glycopolymers, glycopeptides, glycoproteins, glycolipids, glycoclusters, and glycodendrimers through regioselective triazole forming modular and bio-orthogonal coupling protocols). It discusses the widespread applications of these glycoproducts as enzyme inhibitors in drug discovery and development, sensing, gelation, chelation, glycosylation, and catalysis. This review also covers the impact of click chemistry and provides future perspectives on its role in various emerging disciplines of science and technology.
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Affiliation(s)
- Anand K Agrahari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Priyanka Bose
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Manoj K Jaiswal
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Sanchayita Rajkhowa
- Department of Chemistry, Jorhat Institute of Science and Technology (JIST), Jorhat, Assam 785010, India
| | - Anoop S Singh
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Srinivas Hotha
- Department of Chemistry, Indian Institute of Science and Engineering Research (IISER), Pune, Maharashtra 411021, India
| | - Nidhi Mishra
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Vinod K Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
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7
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Cruz L, Correa J, Mateus N, de Freitas V, Tawara MH, Fernandez-Megia E. Dendrimers as Color-Stabilizers of Pyranoanthocyanins: The Dye Concentration Governs the Host-Guest Interaction Mechanisms. ACS APPLIED POLYMER MATERIALS 2021; 3:1457-1464. [PMID: 34632408 PMCID: PMC8496130 DOI: 10.1021/acsapm.0c01321] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Accepted: 02/20/2021] [Indexed: 06/13/2023]
Abstract
Anionic dendrimers have recently emerged as hosts (H) for the color stabilization of the flavylium cation of anthocyanin guests (G). The interaction with a promising, more hydrophobic pyranoanthocyanin illustrates how the structure and concentration of the dye modulate the host-guest interaction mechanisms. NMR and UV-vis titrations (host over guest, from G/H ratio 2089 to 45) showed that at relatively low dendrimer-to-dye concentrations, ion pairs at the dendrimer periphery prevail over dye encapsulation. This promotes the deaggregation of the dye, not previously observed with anthocyanins, and related to the more hydrophobic nature of this dye (deshielding of the dye 1H signals, higher T 2 relaxation times, constant diffusion coefficient). As the dendrimer concentration increases, the dye encapsulation, earlier unseen with structurally simpler flavylium dyes, becomes dominant (shielding and broadening of the dye 1H signals and lower T 2 and diffusion coefficient). The interaction parameters of the encapsulation process (K ∼ 4.51 × 104 M-1, n ∼ 150) indicate the binding of ca. one pyranoanthocyanin molecule by each sulfate terminal group. Our results provide insights into the ability of dendrimers to host structurally diverse pyranoflavylium-based dyes and how the structure of the latter modulates the range of interactions involved. The encapsulation ability of this dendrimer to such pH-sensitive dyes is envisioned for the host-guest sensing applications such as pH-responsive systems used for example in food smart packaging.
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Affiliation(s)
- Luís Cruz
- REQUIMTE/LAQV,
Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, s/n, 4169-007 Porto, Portugal
| | - Juan Correa
- Centro
Singular de Investigación en Química Biolóxica
e Materiais Moleculares (CIQUS) and Departamento de Química
Orgánica, Universidade de Santiago
de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, Spain
| | - Nuno Mateus
- REQUIMTE/LAQV,
Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, s/n, 4169-007 Porto, Portugal
| | - Victor de Freitas
- REQUIMTE/LAQV,
Departamento de Química e Bioquímica, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, s/n, 4169-007 Porto, Portugal
| | - Maun H. Tawara
- Centro
Singular de Investigación en Química Biolóxica
e Materiais Moleculares (CIQUS) and Departamento de Química
Orgánica, Universidade de Santiago
de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, Spain
| | - Eduardo Fernandez-Megia
- Centro
Singular de Investigación en Química Biolóxica
e Materiais Moleculares (CIQUS) and Departamento de Química
Orgánica, Universidade de Santiago
de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, Spain
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8
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Pineux F, Federico S, Klotz KN, Kachler S, Michiels C, Sturlese M, Prato M, Spalluto G, Moro S, Bonifazi D. Targeting G Protein-Coupled Receptors with Magnetic Carbon Nanotubes: The Case of the A 3 Adenosine Receptor. ChemMedChem 2020; 15:1909-1920. [PMID: 32706529 DOI: 10.1002/cmdc.202000466] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Indexed: 12/14/2022]
Abstract
The A3 adenosine receptor (AR) is a G protein-coupled receptor (GPCR) overexpressed in the membrane of specific cancer cells. Thus, the development of nanosystems targeting this receptor could be a strategy to both treat and diagnose cancer. Iron-filled carbon nanotubes (CNTs) are an optimal platform for theranostic purposes, and the use of a magnetic field can be exploited for cancer magnetic cell sorting and thermal therapy. In this work, we have conjugated an A3 AR ligand on the surface of iron-filled CNTs with the aim of targeting cells overexpressing A3 ARs. In particular, two conjugates bearing PEG linkers of different length were designed. A docking analysis of A3 AR showed that neither CNT nor linker interferes with ligand binding to the receptor; this was confirmed by in vitro preliminary radioligand competition assays on A3 AR. Encouraged by this result, magnetic cell sorting was applied to a mixture of cells overexpressing or not the A3 AR in which our compound displayed indiscriminate binding to all cells. Despite this, it is the first time that a GPCR ligand has been anchored to a magnetic nanosystem, thus it opens the door to new applications for cancer treatment.
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Affiliation(s)
- Florent Pineux
- Department of Chemistry and Namur Research College (NARC), University of Namur, Rue de Bruxelles 61, 5000, Namur, Belgium
| | - Stephanie Federico
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, Via L.Giorgeri 1, 34127, Trieste, Italy
| | - Karl-Norbert Klotz
- Institut für Pharmakologie und Toxikologie, Universität Würzburg, Versbacher Straße 9, 97078, Würzburg, Germany
| | - Sonja Kachler
- Institut für Pharmakologie und Toxikologie, Universität Würzburg, Versbacher Straße 9, 97078, Würzburg, Germany
| | - Carine Michiels
- Namur Research Institute for Life Science (NARILIS), Unité de Recherche en Biologie Cellulaire (URBC), University of Namur, 5000, Namur, Belgium
| | - Mattia Sturlese
- Dipartimento di Scienze del Farmaco Molecular Modeling Section (MMS), Università degli Studi di Padova, Via F. Marzolo 5, 35131, Padova, Italy
| | - Maurizio Prato
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, Via L.Giorgeri 1, 34127, Trieste, Italy.,Center for Cooperative Research in Biomaterials (CIC biomaGUNE), Basque Research and Technology Alliance (BRTA), Paseo de Miramón 182, 20014, Donostia-San Sebastián, Spain.,Basque Foundation for Science, Ikerbasque, 48013, Bilbao, Spain
| | - Giampiero Spalluto
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, Via L.Giorgeri 1, 34127, Trieste, Italy
| | - Stefano Moro
- Dipartimento di Scienze del Farmaco Molecular Modeling Section (MMS), Università degli Studi di Padova, Via F. Marzolo 5, 35131, Padova, Italy
| | - Davide Bonifazi
- Institut für Organische Chemie, Universität Wien, Währinger Str. 38, 1090, Wien, Austria
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9
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Haksar D, Quarles van Ufford L, Pieters RJ. A hybrid polymer to target blood group dependence of cholera toxin. Org Biomol Chem 2020; 18:52-55. [DOI: 10.1039/c9ob02369k] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
New hybrid glycopolymers were synthesized that contain two epitopes blocking GM1- and fucose-based intoxication modes of the cholera toxin.
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Affiliation(s)
- Diksha Haksar
- Department of Chemical Biology & Drug Discovery
- Utrecht Institute for Pharmaceutical Sciences
- Utrecht University
- 3508 TB Utrecht
- The Netherlands
| | - Linda Quarles van Ufford
- Department of Chemical Biology & Drug Discovery
- Utrecht Institute for Pharmaceutical Sciences
- Utrecht University
- 3508 TB Utrecht
- The Netherlands
| | - Roland J. Pieters
- Department of Chemical Biology & Drug Discovery
- Utrecht Institute for Pharmaceutical Sciences
- Utrecht University
- 3508 TB Utrecht
- The Netherlands
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10
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Cruz L, Basílio N, Mendoza J, Mateus N, de Freitas V, Tawara MH, Correa J, Fernandez‐Megia E. Impact of a Water‐Soluble Gallic Acid‐Based Dendrimer on the Color‐Stabilizing Mechanisms of Anthocyanins. Chemistry 2019; 25:11696-11706. [DOI: 10.1002/chem.201901912] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Indexed: 11/09/2022]
Affiliation(s)
- Luís Cruz
- REQUIMTE/LAQV Departamento de Química e, Bioquímica, Faculdade de Ciências Universidade do Porto Rua do Campo Alegre, s/n 4169-007 Porto Portugal
| | - Nuno Basílio
- LAQV, REQUIMTE Departamento de Química Faculdade de Ciências e Tecnologia Universidade, Nova de Lisboa 2829-516 Caparica Portugal
| | - Johan Mendoza
- LAQV, REQUIMTE Departamento de Química Faculdade de Ciências e Tecnologia Universidade, Nova de Lisboa 2829-516 Caparica Portugal
| | - Nuno Mateus
- REQUIMTE/LAQV Departamento de Química e, Bioquímica, Faculdade de Ciências Universidade do Porto Rua do Campo Alegre, s/n 4169-007 Porto Portugal
| | - Victor de Freitas
- REQUIMTE/LAQV Departamento de Química e, Bioquímica, Faculdade de Ciências Universidade do Porto Rua do Campo Alegre, s/n 4169-007 Porto Portugal
| | - Maun H. Tawara
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares, (CIQUS) and Departamento de Química Orgánica Universidade de Santiago de Compostela Jenaro de la Fuente s/n 15782 Santiago de Compostela Spain
| | - Juan Correa
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares, (CIQUS) and Departamento de Química Orgánica Universidade de Santiago de Compostela Jenaro de la Fuente s/n 15782 Santiago de Compostela Spain
| | - Eduardo Fernandez‐Megia
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares, (CIQUS) and Departamento de Química Orgánica Universidade de Santiago de Compostela Jenaro de la Fuente s/n 15782 Santiago de Compostela Spain
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11
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Vukojicic P, Béhar G, Tawara MH, Fernandez-Villamarin M, Pecorari F, Fernandez-Megia E, Mouratou B. Multivalent Affidendrons with High Affinity and Specificity toward Staphylococcus aureus as Versatile Tools for Modulating Multicellular Behaviors. ACS APPLIED MATERIALS & INTERFACES 2019; 11:21391-21398. [PMID: 31120726 DOI: 10.1021/acsami.9b05702] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Multivalency is a widely occurring natural phenomenon often exploited in nanotechnology to enhance biorecognition. We report the preparation and characterization of versatile, multivalent Affitin-dendrimer conjugates (Affidendrons) showcased by a set targeting Staphylococcus aureus ( S. aureus), an opportunistic pathogen causing numerous hospital- and community-acquired infections. Affitins are small affinity proteins characterized by higher stability and lower cost-effective production than antibodies. The strategy presented provides a platform for the rational design of multivalent nanodevices that, retaining the ability of Affitins to recognize their target with high specificity, achieve a largely enhanced affinity. Affidendrons with precisely designed size and valency have been exploited to modulate complex multicellular behaviors of S. aureus, such as agglutination and biofilm formation. Agglutination assays showed that Affidendrons rapidly cross-link S. aureus strains with high bacterial cell selectivity. Moreover, remarkably low concentrations of Affidendrons were able to effectively prevent biofilm formation. Overall, Affidendrons represent a promising platform for the rapid and selective pathogen identification, infection imaging, and theranostic applications.
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Affiliation(s)
- Petar Vukojicic
- CRCINA, INSERM, CNRS, Université d'Angers, Université de Nantes , Nantes , France
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica , Universidade de Santiago de Compostela , Jenaro de la Fuente s/n , 15782 Santiago de Compostela , Spain
| | - Ghislaine Béhar
- CRCINA, INSERM, CNRS, Université d'Angers, Université de Nantes , Nantes , France
| | - Maun H Tawara
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica , Universidade de Santiago de Compostela , Jenaro de la Fuente s/n , 15782 Santiago de Compostela , Spain
| | - Marcos Fernandez-Villamarin
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica , Universidade de Santiago de Compostela , Jenaro de la Fuente s/n , 15782 Santiago de Compostela , Spain
| | - Frédéric Pecorari
- CRCINA, INSERM, CNRS, Université d'Angers, Université de Nantes , Nantes , France
| | - Eduardo Fernandez-Megia
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica , Universidade de Santiago de Compostela , Jenaro de la Fuente s/n , 15782 Santiago de Compostela , Spain
| | - Barbara Mouratou
- CRCINA, INSERM, CNRS, Université d'Angers, Université de Nantes , Nantes , France
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12
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Neira JL, Correa J, Rizzuti B, Santofimia-Castaño P, Abian O, Velázquez-Campoy A, Fernandez-Megia E, Iovanna JL. Dendrimers as Competitors of Protein–Protein Interactions of the Intrinsically Disordered Nuclear Chromatin Protein NUPR1. Biomacromolecules 2019; 20:2567-2576. [DOI: 10.1021/acs.biomac.9b00378] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- José L. Neira
- Instituto de Biología
Molecular y Celular, Universidad Miguel Hernández, 03202 Elche, Alicante, Spain
- Instituto de Biocomputación
y Física de Sistemas Complejos (BIFI), Joint Units IQFR-CSIC-BIFI,
and GBsC-CSIC-BIFI, Universidad de Zaragoza, 50018 Zaragoza, Spain
| | - Juan Correa
- Centro Singular
de Investigación en Química Biolóxica e Materiais
Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, La Coruña, Spain
| | - Bruno Rizzuti
- CNR-NANOTEC, Licryl-UOS
Cosenza and CEMIF.Cal, Department of Physics, University of Calabria, Via P. Bucci, Cubo 31 C, 87036 Arcavacata di Rende, Cosenza, Italy
| | - Patricia Santofimia-Castaño
- Centre de Recherche en Cancérologie de Marseille (CRCM), INSERM U1068, CNRS UMR 7258, Aix-Marseille Université and
Institut Paoli-Calmettes, Parc Scientifique et Technologique de Luminy, 163 Avenue de Luminy, 13288 Marseille, France
| | - Olga Abian
- Instituto de Biocomputación
y Física de Sistemas Complejos (BIFI), Joint Units IQFR-CSIC-BIFI,
and GBsC-CSIC-BIFI, Universidad de Zaragoza, 50018 Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragon), 50009 Zaragoza, Spain
- Centro de Investigación Biomédica en Red en el Área Temática de Enfermedades Hepáticas y Digestivas (CIBERehd), 28029 Madrid, Spain
- Departamento de Bioquímica y Biología Molecular y Celular, Universidad de Zaragoza, 50018 Zaragoza, Spain
- Instituto Aragonés de Ciencias de la Salud (IACS), 50009 Zaragoza, Spain
| | - Adrián Velázquez-Campoy
- Instituto de Biocomputación
y Física de Sistemas Complejos (BIFI), Joint Units IQFR-CSIC-BIFI,
and GBsC-CSIC-BIFI, Universidad de Zaragoza, 50018 Zaragoza, Spain
- Aragon Institute for Health Research (IIS Aragon), 50009 Zaragoza, Spain
- Centro de Investigación Biomédica en Red en el Área Temática de Enfermedades Hepáticas y Digestivas (CIBERehd), 28029 Madrid, Spain
- Departamento de Bioquímica y Biología Molecular y Celular, Universidad de Zaragoza, 50018 Zaragoza, Spain
- Fundacion ARAID, Government of Aragon, 50018 Zaragoza, Spain
| | - Eduardo Fernandez-Megia
- Centro Singular
de Investigación en Química Biolóxica e Materiais
Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, La Coruña, Spain
| | - Juan L. Iovanna
- Centre de Recherche en Cancérologie de Marseille (CRCM), INSERM U1068, CNRS UMR 7258, Aix-Marseille Université and
Institut Paoli-Calmettes, Parc Scientifique et Technologique de Luminy, 163 Avenue de Luminy, 13288 Marseille, France
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13
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Koroniak-Szejn K, Tomaszewska J, Grajewski J, Koroniak H. Long chain alkyl and fluoroalkyl glucose and glucosamine derivatives as hyaluronic acid subunits—Scaffolds for drug delivery. J Fluor Chem 2019. [DOI: 10.1016/j.jfluchem.2019.01.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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14
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Zuffo M, Stucchi A, Campos-Salinas J, Cabello-Donayre M, Martínez-García M, Belmonte-Reche E, Pérez-Victoria J, Mergny J, Freccero M, Morales J, Doria F. Carbohydrate-naphthalene diimide conjugates as potential antiparasitic drugs: Synthesis, evaluation and structure-activity studies. Eur J Med Chem 2019; 163:54-66. [DOI: 10.1016/j.ejmech.2018.11.043] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 10/31/2018] [Accepted: 11/18/2018] [Indexed: 12/21/2022]
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15
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Nouraie P, Moradi Dehaghi S, Foroumadi A. Coumarin-1,2,3-triazole hybrid derivatives: Green synthesis and DFT calculations. SYNTHETIC COMMUN 2019. [DOI: 10.1080/00397911.2018.1557686] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Pegah Nouraie
- Department of Chemistry, Tehran North Branch, Islamic Azad University, Tehran, Iran
| | | | - Alireza Foroumadi
- Drug Design and Development Research Center, The Institute of Pharmaceutical Sciences (TIPS), Tehran University of Medical Sciences, Tehran, Iran
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran University of Medical Sciences, Tehran, Iran
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16
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Meguro T, Yoshida S, Igawa K, Tomooka K, Hosoya T. Transient Protection of Organic Azides from Click Reactions with Alkynes by Phosphazide Formation. Org Lett 2018; 20:4126-4130. [DOI: 10.1021/acs.orglett.8b01692] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Tomohiro Meguro
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Kazunobu Igawa
- Institute for Materials Chemistry and Engineering, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan
| | - Katsuhiko Tomooka
- Institute for Materials Chemistry and Engineering, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
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17
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Indu S, Kaliappan KP. A new and informative [a,b,c,d] nomenclature for one-pot multistep transformations: a simple tool to measure synthetic efficiency. RSC Adv 2018; 8:21292-21305. [PMID: 35557999 PMCID: PMC9088519 DOI: 10.1039/c8ra03338b] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Accepted: 06/04/2018] [Indexed: 01/03/2023] Open
Abstract
Domino, cascade and tandem reactions constitute the most efficient and creative chemical transformations with a huge domain of synthetic utility and applications. A number of reactions may be achieved in a single pot, accompanied by the formation of new rings and new bonds, leading towards higher molecular complexity. A lack of one unified, yet informative descriptor often understates the synthetic ingenuity of certain highly creative transformations. In this review, we propose a new tetra-coordinated [a,b,c,d] nomenclature which takes into account and displays the basic parameters which generally indicate the level of efficiency of a chemical transformation. An almost exhaustive set of one-pot multistep reactions may be described by this system and this review is an attempt to display the one-pot multistep transformations reported from our group and to classify them based on our proposed descriptor.
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Affiliation(s)
- Satrajit Indu
- Department of Chemistry, Indian Institute of Technology Bombay Powai Mumbai-400076 India
| | - Krishna P Kaliappan
- Department of Chemistry, Indian Institute of Technology Bombay Powai Mumbai-400076 India
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18
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New branched amino acids for high affinity dendrimeric DC-SIGN ligands. Bioorg Med Chem 2018; 26:1006-1015. [DOI: 10.1016/j.bmc.2017.12.036] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2017] [Revised: 12/22/2017] [Accepted: 12/24/2017] [Indexed: 11/19/2022]
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19
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Lu Y, Song S, Hou C, Pang S, Li X, Wu X, Shao C, Pei Y, Pei Z. Facile fabrication of branched-chain carbohydrate chips for studying carbohydrate-protein interactions by QCM biosensor. CHINESE CHEM LETT 2018. [DOI: 10.1016/j.cclet.2017.08.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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20
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Raza MA, Amin M, Muhammad G, Rashid A, Adnan A. Synthesis of biologically active nickelocenyl–amino acid conjugates using 1,3-dipolar cycloaddition click reactions. RUSS J GEN CHEM+ 2017. [DOI: 10.1134/s107036321711024x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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21
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22
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Sha M, Yao W, Zhang X, Li Z. Synthesis of structure-defined branched hyaluronan tetrasaccharide glycoclusters. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.06.032] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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23
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Sherman SE, Xiao Q, Percec V. Mimicking Complex Biological Membranes and Their Programmable Glycan Ligands with Dendrimersomes and Glycodendrimersomes. Chem Rev 2017; 117:6538-6631. [PMID: 28417638 DOI: 10.1021/acs.chemrev.7b00097] [Citation(s) in RCA: 128] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Synthetic vesicles have been assembled and coassembled from phospholipids, their modified versions, and other single amphiphiles into liposomes, and from block copolymers into polymersomes. Their time-consuming synthesis and preparation as stable, monodisperse, and biocompatible liposomes and polymersomes called for the elaboration of new synthetic methodologies. Amphiphilic Janus dendrimers (JDs) and glycodendrimers (JGDs) represent the most recent self-assembling amphiphiles capable of forming monodisperse, stable, and multifunctional unilamellar and multilamellar onion-like vesicles denoted dendrimersomes (DSs) and glycodendrimersomes (GDSs), dendrimercubosomes (DCs), glycodendrimercubosomes (GDCs), and other complex architectures. Amphiphilic JDs consist of hydrophobic dendrons connected to hydrophilic dendrons and can be thought of as monodisperse oligomers of a single amphiphile. They can be functionalized with a variety of molecules such as dyes, and, in the case of JGDs, with carbohydrates. Their iterative modular synthesis provides efficient access to sequence control at the molecular level, resulting in topologies with specific epitope sequence and density. DSs, GDSs, and other architectures from JDs and JGDs serve as powerful tools for mimicking biological membranes and for biomedical applications such as targeted drug and gene delivery and theranostics. This Review covers all aspects of the synthesis of JDs and JGDs and their biological activity and applications after assembly in aqueous media.
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Affiliation(s)
- Samuel E Sherman
- Roy & Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania , Philadelphia, Pennsylvania 19104-6323, United States
| | - Qi Xiao
- Roy & Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania , Philadelphia, Pennsylvania 19104-6323, United States
| | - Virgil Percec
- Roy & Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania , Philadelphia, Pennsylvania 19104-6323, United States
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24
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Lee J, Kim JC, Lee H, Song S, Kim H, Ree M. Self-Assembling Brush Polymers Bearing Multisaccharides. Macromol Rapid Commun 2017; 38. [DOI: 10.1002/marc.201700013] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2017] [Revised: 02/11/2017] [Indexed: 12/12/2022]
Affiliation(s)
- Jongchan Lee
- Department of Chemistry; Division of Advanced Materials Science; Pohang Accelerator Laboratory, and Polymer Research Institute; Pohang University of Science and Technology; Pohang 37673 Republic of Korea
| | - Jin Chul Kim
- Department of Chemistry; Division of Advanced Materials Science; Pohang Accelerator Laboratory, and Polymer Research Institute; Pohang University of Science and Technology; Pohang 37673 Republic of Korea
- Research Centre for Green Fine Chemicals; Chemical Convergence Research Division; Korea Research Institute of Chemical Technology; Ulsan 44412 Republic of Korea
| | - Hoyeol Lee
- Department of Chemistry; Division of Advanced Materials Science; Pohang Accelerator Laboratory, and Polymer Research Institute; Pohang University of Science and Technology; Pohang 37673 Republic of Korea
| | - Sungjin Song
- Department of Chemistry; Division of Advanced Materials Science; Pohang Accelerator Laboratory, and Polymer Research Institute; Pohang University of Science and Technology; Pohang 37673 Republic of Korea
| | - Heesoo Kim
- Department of Microbiology and Dongguk Medical Institute; Dongguk University College of Medicine; Gyeongju 38066 Republic of Korea
| | - Moonhor Ree
- Department of Chemistry; Division of Advanced Materials Science; Pohang Accelerator Laboratory, and Polymer Research Institute; Pohang University of Science and Technology; Pohang 37673 Republic of Korea
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25
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Atomically precise organomimetic cluster nanomolecules assembled via perfluoroaryl-thiol S NAr chemistry. Nat Chem 2016; 9:333-340. [PMID: 28485398 PMCID: PMC5424550 DOI: 10.1038/nchem.2686] [Citation(s) in RCA: 172] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Accepted: 10/27/2016] [Indexed: 12/15/2022]
Abstract
The majority of biomolecules are intrinsically atomically precise, an important characteristic that enables rational engineering of their recognition and binding properties. However, imparting similar precision to hybrid nanoparticles has been challenging due to inherent limitations of the existing chemical methods and availability of properly designed functional building blocks. Here we report a new approach to form atomically precise and highly tunable hybrid nanomolecules with well-defined three-dimensionality. Perfunctionalization of atomically precise clusters with pentafluoroaryl-terminated linkers produces size-tunable rigid cluster nanomolecules. These species are amenable to facile modification with a variety of thiol-containing molecules and macromolecules. Assembly proceeds at room temperature within hours under mild conditions, and the resulting nanomolecules exhibit high stabilities due to their full covalency. We further demonstrate how these nanomolecules grafted with saccharides can exhibit dramatically improved binding affinity toward a protein. Ultimately, the developed strategy allows the rapid generation of precise molecular assemblies for investigating multivalent interactions.
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26
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Terada Y, Seto H, Hoshino Y, Murakami T, Shinohara S, Tamada K, Miura Y. SPR study for analysis of a water-soluble glycopolymer interface and molecular recognition properties. Polym J 2016. [DOI: 10.1038/pj.2016.99] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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27
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Lauko J, Kouwer PHJ, Rowan AE. 1
H
‐1,2,3‐Triazole: From Structure to Function and Catalysis. J Heterocycl Chem 2016. [DOI: 10.1002/jhet.2770] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Ján Lauko
- Institute for Molecules and MaterialsRadboud University Nijmegen Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - Paul H. J. Kouwer
- Institute for Molecules and MaterialsRadboud University Nijmegen Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - Alan E. Rowan
- Institute for Molecules and MaterialsRadboud University Nijmegen Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
- Australian Institute for Bioengineering and Nanotechnology (AIBN)The University of Queensland Brisbane QLD 4072 Australia
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28
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Sunkari YK, Alam F, Kandiyal PS, Aloysius S, Ampapathi RS, Chakraborty TK. Influence of Linker Length on Conformational Preferences of Glycosylated Sugar Amino Acid Foldamers. Chembiochem 2016; 17:1839-1844. [DOI: 10.1002/cbic.201600386] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Indexed: 01/12/2023]
Affiliation(s)
- Yashoda Krishna Sunkari
- Department of Organic Chemistry; Indian Institute of Science, CV Raman Road; Bengaluru 560012 India
- Medicinal and Process Chemistry Division; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension, Sitapur Road; Lucknow 226031 India
| | - Faiyaz Alam
- Centre for Nuclear Magnetic Resonance; SAIF; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension, Sitapur Road; Lucknow 226031 India
| | - Pancham Singh Kandiyal
- Centre for Nuclear Magnetic Resonance; SAIF; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension, Sitapur Road; Lucknow 226031 India
| | - Siriwardena Aloysius
- Laboratoire des Glucides (UMR 6912); CNRS-FRE-3517; Universit de Picardie Jules Verne, 33, Rue St Leu, Faculte des Sciences; Amiens 80039 France
| | - Ravi Sankar Ampapathi
- Centre for Nuclear Magnetic Resonance; SAIF; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension, Sitapur Road; Lucknow 226031 India
| | - Tushar Kanti Chakraborty
- Department of Organic Chemistry; Indian Institute of Science, CV Raman Road; Bengaluru 560012 India
- Medicinal and Process Chemistry Division; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension, Sitapur Road; Lucknow 226031 India
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29
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Leire E, Amaral SP, Louzao I, Winzer K, Alexander C, Fernandez-Megia E, Fernandez-Trillo F. Dendrimer mediated clustering of bacteria: improved aggregation and evaluation of bacterial response and viability. Biomater Sci 2016; 4:998-1006. [PMID: 27127812 DOI: 10.1039/c6bm00079g] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Here, we evaluate how cationic gallic acid-triethylene glycol (GATG) dendrimers interact with bacteria and their potential to develop new antimicrobials. We demonstrate that GATG dendrimers functionalised with primary amines in their periphery can induce the formation of clusters in Vibrio harveyi, an opportunistic marine pathogen, in a generation dependent manner. Moreover, these cationic GATG dendrimers demonstrate an improved ability to induce cluster formation when compared to poly(N-[3-(dimethylamino)propyl]methacrylamide) [p(DMAPMAm)], a cationic linear polymer previously shown to cluster bacteria. Viability of the bacteria within the formed clusters and evaluation of quorum sensing controlled phenotypes (i.e. light production in V. harveyi) suggest that GATG dendrimers may be activating microbial responses by maintaining a high concentration of quorum sensing signals inside the clusters while increasing permeability of the microbial outer membranes. Thus, the reported GATG dendrimers constitute a valuable platform for the development of novel antimicrobial materials that can target microbial viability and/or virulence.
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Affiliation(s)
- Emma Leire
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Jenaro de la Fuente s/n, 15782 Santiago de Compostela, Spain.
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30
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Tiwari VK, Mishra BB, Mishra KB, Mishra N, Singh AS, Chen X. Cu-Catalyzed Click Reaction in Carbohydrate Chemistry. Chem Rev 2016; 116:3086-240. [PMID: 26796328 DOI: 10.1021/acs.chemrev.5b00408] [Citation(s) in RCA: 523] [Impact Index Per Article: 65.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Cu(I)-catalyzed azide-alkyne 1,3-dipolar cycloaddition (CuAAC), popularly known as the "click reaction", serves as the most potent and highly dependable tool for facile construction of simple to complex architectures at the molecular level. Click-knitted threads of two exclusively different molecular entities have created some really interesting structures for more than 15 years with a broad spectrum of applicability, including in the fascinating fields of synthetic chemistry, medicinal science, biochemistry, pharmacology, material science, and catalysis. The unique properties of the carbohydrate moiety and the advantages of highly chemo- and regioselective click chemistry, such as mild reaction conditions, efficient performance with a wide range of solvents, and compatibility with different functionalities, together produce miraculous neoglycoconjugates and neoglycopolymers with various synthetic, biological, and pharmaceutical applications. In this review we highlight the successful advancement of Cu(I)-catalyzed click chemistry in glycoscience and its applications as well as future scope in different streams of applied sciences.
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Affiliation(s)
- Vinod K Tiwari
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Bhuwan B Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Kunj B Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Nidhi Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Anoop S Singh
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Xi Chen
- Department of Chemistry, One Shields Avenue, University of California-Davis , Davis, California 95616, United States
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31
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Anandkumar D, Raja R, Rajakumar P. Synthesis, photophysical properties and anticancer activity of micro-environment sensitive amphiphilic bile acid dendrimers. RSC Adv 2016. [DOI: 10.1039/c5ra20147k] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Porphyrin-cored bile acid dendrimers containing deoxymethyl cholate and methyl cholate units at the periphery, have been synthesized by convergent methodology using a click chemistry approach and characterized by 1H and 13C NMR and MALDI-TOF MS data.
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Affiliation(s)
- Devaraj Anandkumar
- Department of Organic Chemistry
- University of Madras
- Maraimalai Campus
- Chennai 600 025
- India
| | - Rathinam Raja
- Department of Organic Chemistry
- University of Madras
- Maraimalai Campus
- Chennai 600 025
- India
| | - Perumal Rajakumar
- Department of Organic Chemistry
- University of Madras
- Maraimalai Campus
- Chennai 600 025
- India
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32
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Grillaud M, Ruiz de Garibay AP, Bianco A. Polycationic adamantane-based dendrons form nanorods in complex with plasmid DNA. RSC Adv 2016. [DOI: 10.1039/c6ra01281g] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Different HYDRAmers are synthesized and complexed to a model plasmid DNA. Appropriate chemical modifications can improve efficiently the complexation to get HYDRAplexes, in form of long nanorods, with very good DNA binding and protecting properties.
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Affiliation(s)
- Maxime Grillaud
- CNRS
- Institut de Biologie Moléculaire et Cellulaire
- Immunopathologie et Chimie Thérapeutique
- 67000 Strasbourg
- France
| | - Aritz Perez Ruiz de Garibay
- CNRS
- Institut de Biologie Moléculaire et Cellulaire
- Immunopathologie et Chimie Thérapeutique
- 67000 Strasbourg
- France
| | - Alberto Bianco
- CNRS
- Institut de Biologie Moléculaire et Cellulaire
- Immunopathologie et Chimie Thérapeutique
- 67000 Strasbourg
- France
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33
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Cavallo G, Metrangolo P, Pilati T, Resnati G, Scrivanti A, Aversa M, Cariati E. One “Click” access to self-complementary molecular modules for halogen bonding. RSC Adv 2016. [DOI: 10.1039/c6ra05341f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The application of “click chemistry” has proved its efficacy for the construction of novel molecular modules for halogen bonding driven self-assembly.
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Affiliation(s)
- G. Cavallo
- NFMLab
- Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta”
- Politecnico di Milano
- 20131 Milan
- Italy
| | - P. Metrangolo
- NFMLab
- Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta”
- Politecnico di Milano
- 20131 Milan
- Italy
| | - T. Pilati
- NFMLab
- Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta”
- Politecnico di Milano
- 20131 Milan
- Italy
| | - G. Resnati
- NFMLab
- Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta”
- Politecnico di Milano
- 20131 Milan
- Italy
| | - A. Scrivanti
- Dipartimento DSMN
- Università Ca'Foscari Venezia
- I-30172 Mestre
- Italy
| | - M. Aversa
- Consorzio Interuniversitario CIRCC
- I-70126 Bari
- Italy
| | - E. Cariati
- Dipartimento di Chimica and INSTM UdR Milano
- University of Milan
- I-20133 Milan
- Italy
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34
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Boyer C, Corrigan NA, Jung K, Nguyen D, Nguyen TK, Adnan NNM, Oliver S, Shanmugam S, Yeow J. Copper-Mediated Living Radical Polymerization (Atom Transfer Radical Polymerization and Copper(0) Mediated Polymerization): From Fundamentals to Bioapplications. Chem Rev 2015; 116:1803-949. [DOI: 10.1021/acs.chemrev.5b00396] [Citation(s) in RCA: 356] [Impact Index Per Article: 39.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Cyrille Boyer
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Nathaniel Alan Corrigan
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Kenward Jung
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Diep Nguyen
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Thuy-Khanh Nguyen
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Nik Nik M. Adnan
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Susan Oliver
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Sivaprakash Shanmugam
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
| | - Jonathan Yeow
- Australian Centre for Nanomedicine, and ‡Centre for Advanced
Macromolecular
Design (CAMD), School of Chemical Engineering, University of New South Wales, Sydney 2052, Australia
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35
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Affiliation(s)
- Yoshiko Miura
- Department of Chemical Engineering, Graduate
School of Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Yu Hoshino
- Department of Chemical Engineering, Graduate
School of Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Hirokazu Seto
- Department of Chemical Engineering, Graduate
School of Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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36
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Marchiori MF, Pires Souto DE, Oliveira Bortot L, Francisco Pereira J, Kubota LT, Cummings RD, Dias-Baruffi M, Carvalho I, Campo VL. Synthetic 1,2,3-triazole-linked glycoconjugates bind with high affinity to human galectin-3. Bioorg Med Chem 2015; 23:3414-25. [DOI: 10.1016/j.bmc.2015.04.044] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2015] [Revised: 04/02/2015] [Accepted: 04/13/2015] [Indexed: 11/29/2022]
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37
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Wang X, Ge C, Ling Y, Tang H. Preparation and UCST-type phase behavior of glycopolypeptides in alcoholic solvents. RSC Adv 2015. [DOI: 10.1039/c5ra24697k] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
Glycopolypeptides with mannose pendants exhibited a reversible UCST-type phase behavior in various alcoholic solvents. The solution phase transition temperature was related to the solvent, concentration, main-chain length, and side-chain composition.
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Affiliation(s)
- Xi Wang
- Key Laboratory of Polymeric Materials and Application Technology of Hunan Province
- Key Laboratory of Advanced Functional Polymer Materials of Colleges and Universities of Hunan Province
- College of Chemistry
- Xiangtan University
- Xiangtan
| | - Chenglong Ge
- Key Laboratory of Polymeric Materials and Application Technology of Hunan Province
- Key Laboratory of Advanced Functional Polymer Materials of Colleges and Universities of Hunan Province
- College of Chemistry
- Xiangtan University
- Xiangtan
| | - Ying Ling
- Key Laboratory of Polymeric Materials and Application Technology of Hunan Province
- Key Laboratory of Advanced Functional Polymer Materials of Colleges and Universities of Hunan Province
- College of Chemistry
- Xiangtan University
- Xiangtan
| | - Haoyu Tang
- Key Laboratory of Polymeric Materials and Application Technology of Hunan Province
- Key Laboratory of Advanced Functional Polymer Materials of Colleges and Universities of Hunan Province
- College of Chemistry
- Xiangtan University
- Xiangtan
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38
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Bagdi PR, Basha RS, Khan AT. Synthesis of 2-triazolyl-imidazo[1,2-a]pyridine through a one-pot three-component reaction using a nano copper oxide assisted click-catalyst. RSC Adv 2015. [DOI: 10.1039/c5ra09671e] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
The syntheses of 2-triazolyl imidazo[1,2-a]pyridine were accomplished through 5-exo dig cyclisation using 5 mol% nanocopper oxide together with 10 mol% sodium ascorbate as a click-catalyst in ethanol at 70 °C.
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Affiliation(s)
- Prasanta Ray Bagdi
- Department of Chemistry
- Indian Institute of Technology Guwahati
- Guwahati 781 039
- India
| | - R. Sidick Basha
- Department of Chemistry
- Indian Institute of Technology Guwahati
- Guwahati 781 039
- India
| | - Abu T. Khan
- Department of Chemistry
- Indian Institute of Technology Guwahati
- Guwahati 781 039
- India
- Vice-Chancellor
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39
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Twibanire JDK, Paul NK, Grindley TB. Synthesis of novel types of polyester glycodendrimers as potential inhibitors of urinary tract infections. NEW J CHEM 2015. [DOI: 10.1039/c4nj00992d] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Syntheses of highly mannosylated polyester dendrimers with 2, 4, 8, and 16 α-d-mannopyranose residues on their peripheries connected by different linker arms are presented.
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Affiliation(s)
| | - Nawal K. Paul
- Department of Chemistry
- Dalhousie University
- Halifax
- Canada
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40
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Tsukiji S, Hamachi I. Ligand-directed tosyl chemistry for selective native protein labeling in vitro, in cells, and in vivo. Methods Mol Biol 2015; 1266:243-263. [PMID: 25560080 DOI: 10.1007/978-1-4939-2272-7_17] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Introducing nongenetically encoded, synthetic probes into specific proteins is now recognized as a key component in chemical biology. In particular, the ability to chemically modify specific "native" proteins in various contexts from in vitro to cellular systems is of fundamental importance to study biological systems. We developed a protein-labeling technique termed ligand-directed tosyl (LDT) chemistry for this purpose. This method is capable of labeling specific native proteins with diverse synthetic probes with high site specificity and target selectivity without compromising protein function. Here we describe the principle of the LDT chemistry and the protocol for selective chemical labeling of native carbonic anhydrase in vitro, in blood cells (ex vivo), and in living mice (in vivo).
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Affiliation(s)
- Shinya Tsukiji
- Department of Bioengineering, Nagaoka University of Technology, 1603-1 Kamitomioka, Nagaoka, Niigata, 940-2188, Japan
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41
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Bueno-Martínez M, Molina-Pinilla I, Hakkou K, Galbis JA. Synthesis and characterization of copoly(amide triazole)s derived fromd-Glucose. ACTA ACUST UNITED AC 2014. [DOI: 10.1002/pola.27444] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Manuel Bueno-Martínez
- Departamento de Química Orgánica y Farmacéutica, Facultad de Farmacia; Universidad de Sevilla; 41012 Sevilla Spain
| | - Inmaculada Molina-Pinilla
- Departamento de Química Orgánica y Farmacéutica, Facultad de Farmacia; Universidad de Sevilla; 41012 Sevilla Spain
| | - Khalid Hakkou
- Departamento de Química Orgánica y Farmacéutica, Facultad de Farmacia; Universidad de Sevilla; 41012 Sevilla Spain
| | - Juan A. Galbis
- Departamento de Química Orgánica y Farmacéutica, Facultad de Farmacia; Universidad de Sevilla; 41012 Sevilla Spain
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42
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Namvari M, Namazi H. Sweet graphene I: toward hydrophilic graphene nanosheets via click grafting alkyne-saccharides onto azide-functionalized graphene oxide. Carbohydr Res 2014; 396:1-8. [DOI: 10.1016/j.carres.2014.06.012] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2014] [Revised: 06/03/2014] [Accepted: 06/11/2014] [Indexed: 11/29/2022]
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43
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Sousa-Herves A, Novoa-Carballal R, Riguera R, Fernandez-Megia E. GATG dendrimers and PEGylated block copolymers: from synthesis to bioapplications. AAPS JOURNAL 2014; 16:948-61. [PMID: 25004824 DOI: 10.1208/s12248-014-9642-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2014] [Accepted: 06/20/2014] [Indexed: 12/18/2022]
Abstract
Dendrimers are synthetic macromolecules composed of repetitive layers of branching units that emerge from a central core. They are characterized by a tunable size and precise number of peripheral groups which determine their physicochemical properties and function. Their high multivalency, functional surface, and globular architecture with diameters in the nanometer scale makes them ideal candidates for a wide range of applications. Gallic acid-triethylene glycol (GATG) dendrimers have attracted our attention as a promising platform in the biomedical field because of their high tunability and versatility. The presence of terminal azides in GATG dendrimers and poly(ethylene glycol) (PEG)-dendritic block copolymers allows their efficient functionalization with a variety of ligands of biomedical relevance including anionic and cationic groups, carbohydrates, peptides, or imaging agents. The resulting functionalized dendrimers have found application in drug and gene delivery, as antiviral agents and for the treatment of neurodegenerative diseases, in diagnosis and as tools to study multivalent carbohydrate recognition and dendrimer dynamics. Herein, we present an account on the preparation and recent applications of GATG dendrimers in these fields.
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Affiliation(s)
- Ana Sousa-Herves
- Department of Organic Chemistry and Center for Research in Biological Chemistry and Molecular Materials (CIQUS), University of Santiago de Compostela, Jenaro de la Fuente s/n, 15782, Santiago de Compostela, Spain
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44
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Li CW, Hon KW, Ghosh B, Li PH, Lin HY, Chan PH, Lin CH, Chen YC, Mong KKT. Synthesis of Oligomeric Mannosides and Their Structure-Binding Relationship with Concanavalin A. Chem Asian J 2014; 9:1786-96. [DOI: 10.1002/asia.201402029] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2014] [Revised: 03/20/2014] [Indexed: 01/15/2023]
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45
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Wang L, Kiemle DJ, Boyle CJ, Connors EL, Gitsov I. “Click” Synthesis of Intrinsically Hydrophilic Dendrons and Dendrimers Containing Metal Binding Moieties at Each Branching Unit. Macromolecules 2014. [DOI: 10.1021/ma500126f] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Lili Wang
- Department of Chemistry and ‡The Michael M. Szwarc Polymer Research Institute, State University of New York-ESF, Syracuse, New York 13210, United States
| | - David J. Kiemle
- Department of Chemistry and ‡The Michael M. Szwarc Polymer Research Institute, State University of New York-ESF, Syracuse, New York 13210, United States
| | - Connor J. Boyle
- Department of Chemistry and ‡The Michael M. Szwarc Polymer Research Institute, State University of New York-ESF, Syracuse, New York 13210, United States
| | - Eoghan L. Connors
- Department of Chemistry and ‡The Michael M. Szwarc Polymer Research Institute, State University of New York-ESF, Syracuse, New York 13210, United States
| | - Ivan Gitsov
- Department of Chemistry and ‡The Michael M. Szwarc Polymer Research Institute, State University of New York-ESF, Syracuse, New York 13210, United States
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46
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Grillaud M, Russier J, Bianco A. Polycationic Adamantane-Based Dendrons of Different Generations Display High Cellular Uptake without Triggering Cytotoxicity. J Am Chem Soc 2014; 136:810-9. [DOI: 10.1021/ja411987g] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Maxime Grillaud
- CNRS, Institut de Biologie Moléculaire et Cellulaire, Immunopathologie et Chimie Thérapeutique, Strasbourg, France
| | - Julie Russier
- CNRS, Institut de Biologie Moléculaire et Cellulaire, Immunopathologie et Chimie Thérapeutique, Strasbourg, France
| | - Alberto Bianco
- CNRS, Institut de Biologie Moléculaire et Cellulaire, Immunopathologie et Chimie Thérapeutique, Strasbourg, France
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47
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Roberts DA, Crossley MJ, Perrier S. Fluorescent bowl-shaped nanoparticles from ‘clicked’ porphyrin–polymer conjugates. Polym Chem 2014. [DOI: 10.1039/c4py00250d] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the synthesis and post-synthetic modification of a library of hydrophilic and hydrophobic ‘clicked’ triazole-linked porphyrin–polymer conjugates (PPCs), and their subsequent assembly into fluorescent bowl-shaped nanoparticles.
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Affiliation(s)
- Derrick A. Roberts
- Key Centre for Polymers and Colloids
- The University of Sydney
- , Australia
- School of Chemistry
- The University of Sydney
| | | | - Sébastien Perrier
- Department of Chemistry
- The University of Warwick
- Coventry, UK
- Faculty of Pharmacy and Pharmaceutical Sciences
- Monash University
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48
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Prasad AN, Reddy BM, Jeong EY, Park SE. Cu(ii) PBS-bridged PMOs catalyzed one-pot synthesis of 1,4-disubstituted 1,2,3-triazoles in water through click chemistry. RSC Adv 2014. [DOI: 10.1039/c4ra04093g] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Efficient synthesis of 1,4-disubstituted 1,2,3-triazoles using Cu(ii)-PBS-HPMO as a heterogeneous catalyst.
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Affiliation(s)
- Avvari N. Prasad
- Inorganic and Physical Chemistry Division
- CSIR–Indian Institute of Chemical Technology
- Hyderabad – 500007, India
- Laboratory of Nano-Green Catalysis
- Department of Chemistry
| | - Benjaram M. Reddy
- Inorganic and Physical Chemistry Division
- CSIR–Indian Institute of Chemical Technology
- Hyderabad – 500007, India
| | - Eun-Young Jeong
- Laboratory of Nano-Green Catalysis
- Department of Chemistry
- Inha University
- Incheon 402-751, Republic of Korea
| | - Sang-Eon Park
- Laboratory of Nano-Green Catalysis
- Department of Chemistry
- Inha University
- Incheon 402-751, Republic of Korea
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50
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