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For: Galla L, Meyer AJ, Spiering A, Sischka A, Mayer M, Hall AR, Reimann P, Anselmetti D. Hydrodynamic slip on DNA observed by optical tweezers-controlled translocation experiments with solid-state and lipid-coated nanopores. Nano Lett 2014;14:4176-4182. [PMID: 24935198 DOI: 10.1021/nl501909t] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Number Cited by Other Article(s)
1
Kumar A, Bakli C, Chakraborty S. Ion-Solvent Interactions under Confinement Hold the Key to Tuning the DNA Translocation Speeds in Polyelectrolyte-Functionalized Nanopores. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024;40:7300-7309. [PMID: 38536237 DOI: 10.1021/acs.langmuir.3c02816] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/10/2024]
2
Vahid H, Scacchi A, Sammalkorpi M, Ala-Nissila T. Nonmonotonic electrophoretic mobility of rodlike polyelectrolytes by multivalent coions in added salt. Phys Rev E 2024;109:014501. [PMID: 38366448 DOI: 10.1103/physreve.109.014501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 11/30/2023] [Indexed: 02/18/2024]
3
Ahmadi E, Sadeghi A, Chakraborty S. Slip-Coupled Electroosmosis and Electrophoresis Dictate DNA Translocation Speed in Solid-State Nanopores. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2023;39:12292-12301. [PMID: 37603825 DOI: 10.1021/acs.langmuir.3c01230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/23/2023]
4
Mayer DB, Braun D, Franosch T. Thermophoretic motion of a charged single colloidal particle. Phys Rev E 2023;107:044602. [PMID: 37198806 DOI: 10.1103/physreve.107.044602] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Accepted: 03/13/2023] [Indexed: 05/19/2023]
5
Yang X, Buyukdagli S, Scacchi A, Sammalkorpi M, Ala-Nissila T. Theoretical and computational analysis of the electrophoretic polymer mobility inversion induced by charge correlations. Phys Rev E 2023;107:034503. [PMID: 37073074 DOI: 10.1103/physreve.107.034503] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 02/14/2023] [Indexed: 04/20/2023]
6
Chantipmanee N, Xu Y. Nanofluidics for chemical and biological dynamics in solution at the single molecular level. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2022.116877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
7
Yang L, Hu J, Li MC, Xu M, Gu ZY. Solid-state nanopore: chemical modifications, interactions, and functionalities. Chem Asian J 2022;17:e202200775. [PMID: 36071031 DOI: 10.1002/asia.202200775] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Revised: 09/06/2022] [Indexed: 11/08/2022]
8
Yang J, Xu Y. Nanofluidics for sub-single cellular studies: Nascent progress, critical technologies, and future perspectives. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2021.09.066] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
9
Ying C, Houghtaling J, Mayer M. Effects of off-axis translocation through nanopores on the determination of shape and volume estimates for individual particles. NANOTECHNOLOGY 2022;33:275501. [PMID: 35320779 DOI: 10.1088/1361-6528/ac6087] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Accepted: 03/22/2022] [Indexed: 06/14/2023]
10
Corti HR, Appignanesi GA, Barbosa MC, Bordin JR, Calero C, Camisasca G, Elola MD, Franzese G, Gallo P, Hassanali A, Huang K, Laria D, Menéndez CA, de Oca JMM, Longinotti MP, Rodriguez J, Rovere M, Scherlis D, Szleifer I. Structure and dynamics of nanoconfined water and aqueous solutions. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2021;44:136. [PMID: 34779954 DOI: 10.1140/epje/s10189-021-00136-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2021] [Accepted: 10/06/2021] [Indexed: 06/13/2023]
11
Das N, Ropmay GD, Joseph AM, RoyChaudhuri C. Modeling the Effective Conductance Drop Due to a Particle in a Solid State Nanopore Towards Optimized Design. IEEE Trans Nanobioscience 2020;19:598-608. [PMID: 32780701 DOI: 10.1109/tnb.2020.3015592] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
12
Kazoe Y, Mawatari K, Li L, Emon H, Miyawaki N, Chinen H, Morikawa K, Yoshizaki A, Dittrich PS, Kitamori T. Lipid Bilayer-Modified Nanofluidic Channels of Sizes with Hundreds of Nanometers for Characterization of Confined Water and Molecular/Ion Transport. J Phys Chem Lett 2020;11:5756-5762. [PMID: 32633535 DOI: 10.1021/acs.jpclett.0c01084] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
13
Eggenberger OM, Ying C, Mayer M. Surface coatings for solid-state nanopores. NANOSCALE 2019;11:19636-19657. [PMID: 31603455 DOI: 10.1039/c9nr05367k] [Citation(s) in RCA: 56] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
14
Houghtaling J, Ying C, Eggenberger OM, Fennouri A, Nandivada S, Acharjee M, Li J, Hall AR, Mayer M. Estimation of Shape, Volume, and Dipole Moment of Individual Proteins Freely Transiting a Synthetic Nanopore. ACS NANO 2019;13:5231-5242. [PMID: 30995394 DOI: 10.1021/acsnano.8b09555] [Citation(s) in RCA: 86] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
15
Burelbach J, Stark H. Determining phoretic mobilities with Onsager's reciprocal relations: Electro- and thermophoresis revisited. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2019;42:4. [PMID: 30643995 DOI: 10.1140/epje/i2019-11769-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Accepted: 12/10/2018] [Indexed: 06/09/2023]
16
Töws T, Reimann P. Lateral trapping of DNA inside a voltage gated nanopore. Phys Rev E 2017;95:062413. [PMID: 28709268 DOI: 10.1103/physreve.95.062413] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2017] [Indexed: 11/07/2022]
17
Graphene nanopores toward DNA sequencing: a review of experimental aspects. Sci China Chem 2017. [DOI: 10.1007/s11426-016-9016-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
18
Shi W, Friedman AK, Baker LA. Nanopore Sensing. Anal Chem 2017;89:157-188. [PMID: 28105845 PMCID: PMC5316487 DOI: 10.1021/acs.analchem.6b04260] [Citation(s) in RCA: 274] [Impact Index Per Article: 39.1] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
19
Adur J, Barbosa G, Pelegati V, Baratti M, Cesar C, Casco V, Carvalho H. Multimodal and non-linear optical microscopy applications in reproductive biology. Microsc Res Tech 2016;79:567-82. [DOI: 10.1002/jemt.22684] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Revised: 04/18/2016] [Accepted: 05/04/2016] [Indexed: 01/11/2023]
20
Zhai S, Zhao H. Influence of concentration polarization on DNA translocation through a nanopore. Phys Rev E 2016;93:052409. [PMID: 27300926 PMCID: PMC4910644 DOI: 10.1103/physreve.93.052409] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2015] [Indexed: 11/07/2022]
21
Zahid OK, Hall AR. Helium Ion Microscope Fabrication of Solid-State Nanopore Devices for Biomolecule Analysis. HELIUM ION MICROSCOPY 2016. [DOI: 10.1007/978-3-319-41990-9_18] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
22
Henley RY, Carson S, Wanunu M. Studies of RNA Sequence and Structure Using Nanopores. PROGRESS IN MOLECULAR BIOLOGY AND TRANSLATIONAL SCIENCE 2016;139:73-99. [PMID: 26970191 DOI: 10.1016/bs.pmbts.2015.10.020] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
23
Bulushev RD, Marion S, Radenovic A. Relevance of the Drag Force during Controlled Translocation of a DNA-Protein Complex through a Glass Nanocapillary. NANO LETTERS 2015;15:7118-25. [PMID: 26393370 DOI: 10.1021/acs.nanolett.5b03264] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
24
Li J, Yu D, Zhao Q. Solid-state nanopore-based DNA single molecule detection and sequencing. Mikrochim Acta 2015. [DOI: 10.1007/s00604-015-1542-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
25
Lepoitevin M, Coulon PE, Bechelany M, Cambedouzou J, Janot JM, Balme S. Influence of nanopore surface charge and magnesium ion on polyadenosine translocation. NANOTECHNOLOGY 2015;26:144001. [PMID: 25785663 DOI: 10.1088/0957-4484/26/14/144001] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
26
Sischka A, Galla L, Meyer AJ, Spiering A, Knust S, Mayer M, Hall AR, Beyer A, Reimann P, Gölzhäuser A, Anselmetti D. Controlled translocation of DNA through nanopores in carbon nano-, silicon-nitride- and lipid-coated membranes. Analyst 2015;140:4843-7. [DOI: 10.1039/c4an02319f] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
27
Freedman KJ, Haq SR, Fletcher MR, Foley JP, Jemth P, Edel JB, Kim MJ. Nonequilibrium capture rates induce protein accumulation and enhanced adsorption to solid-state nanopores. ACS NANO 2014;8:12238-49. [PMID: 25426798 DOI: 10.1021/nn5062645] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
28
Palyulin VV, Ala-Nissila T, Metzler R. Polymer translocation: the first two decades and the recent diversification. SOFT MATTER 2014;10:9016-37. [PMID: 25301107 DOI: 10.1039/c4sm01819b] [Citation(s) in RCA: 139] [Impact Index Per Article: 13.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
29
Bulushev RD, Steinbock LJ, Khlybov S, Steinbock JF, Keyser UF, Radenovic A. Measurement of the position-dependent electrophoretic force on DNA in a glass nanocapillary. NANO LETTERS 2014;14:6606-13. [PMID: 25343616 DOI: 10.1021/nl503272r] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
30
Drücker P, Gerke V, Galla HJ. Importance of phospholipid bilayer integrity in the analysis of protein-lipid interactions. Biochem Biophys Res Commun 2014;453:143-7. [PMID: 25264195 DOI: 10.1016/j.bbrc.2014.09.079] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2014] [Accepted: 09/18/2014] [Indexed: 11/29/2022]
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