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Bouthillette LM, Aniebok V, Colosimo DA, Brumley D, MacMillan JB. Nonenzymatic Reactions in Natural Product Formation. Chem Rev 2022; 122:14815-14841. [PMID: 36006409 DOI: 10.1021/acs.chemrev.2c00306] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Biosynthetic mechanisms of natural products primarily depend on systems of protein catalysts. However, within the field of biosynthesis, there are cases in which the inherent chemical reactivity of metabolic intermediates and substrates evades the involvement of enzymes. These reactions are difficult to characterize based on their reactivity and occlusion within the milieu of the cellular environment. As we continue to build a strong foundation for how microbes and higher organisms produce natural products, therein lies a need for understanding how protein independent or nonenzymatic biosynthetic steps can occur. We have classified such reactions into four categories: intramolecular, multicomponent, tailoring, and light-induced reactions. Intramolecular reactions is one of the most well studied in the context of biomimetic synthesis, consisting of cyclizations and cycloadditions due to the innate reactivity of the intermediates. There are two subclasses that make up multicomponent reactions, one being homologous multicomponent reactions which results in dimeric and pseudodimeric natural products, and the other being heterologous multicomponent reactions, where two or more precursors from independent biosynthetic pathways undergo a variety of reactions to produce the mature natural product. The third type of reaction discussed are tailoring reactions, where postmodifications occur on the natural products after the biosynthetic machinery is completed. The last category consists of light-induced reactions involving ecologically relevant UV light rather than high intensity UV irradiation that is traditionally used in synthetic chemistry. This review will cover recent nonenzymatic biosynthetic mechanisms and include sources for those reviewed previously.
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Affiliation(s)
- Leah M Bouthillette
- Deparment of Chemistry and Biochemistry, University of California, Santa Cruz, 1156 High Street, Santa Cruz, California 95064, United States
| | - Victor Aniebok
- Deparment of Chemistry and Biochemistry, University of California, Santa Cruz, 1156 High Street, Santa Cruz, California 95064, United States
| | - Dominic A Colosimo
- Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390 United States
| | - David Brumley
- Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390 United States
| | - John B MacMillan
- Deparment of Chemistry and Biochemistry, University of California, Santa Cruz, 1156 High Street, Santa Cruz, California 95064, United States.,Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390 United States
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2
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Hu YJ, Li LX, Han JC, Min L, Li CC. Recent Advances in the Total Synthesis of Natural Products Containing Eight-Membered Carbocycles (2009-2019). Chem Rev 2020; 120:5910-5953. [PMID: 32343125 DOI: 10.1021/acs.chemrev.0c00045] [Citation(s) in RCA: 74] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Natural products containing eight-membered carbocycles constitute a class of structurally intriguing and biologically important molecules such as the famous diterpenes taxol and vinigrol. Such natural products are being increasingly investigated because of their fascinating architectural features and potent medicinal properties. However, synthesis of natural products with cyclooctane moieties has proved to be highly challenging. This review highlights the recently completed total syntheses of natural products with eight-membered carbocycles with a focus on strategic considerations. A collection of 27 representative studies from the literature covering the decade from 2009 to 2019 is described in chronological order with relevant studies grouped together, including syntheses of the same natural product by different research groups using different strategies. Finally, a summary and outlook including a discussion of the major features of each strategy used in the syntheses are presented. This review illustrates the diversity and creativity in the elegant synthetic designs of eight-membered carbocycles. We hope this review will provide timely illumination and beneficial guidance for future synthetic efforts for organic chemists who are interested in this area.
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Affiliation(s)
- Ya-Jian Hu
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Li-Xuan Li
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Jing-Chun Han
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Long Min
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Chuang-Chuang Li
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
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Quintela-Varela H, Jamieson CS, Shao Q, Houk KN, Trauner D. Bioinspired Synthesis of (-)-PF-1018. Angew Chem Int Ed Engl 2020; 59:5263-5267. [PMID: 31788926 PMCID: PMC9899496 DOI: 10.1002/anie.201912452] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2019] [Revised: 11/09/2019] [Indexed: 11/10/2022]
Abstract
The combination of electrocyclizations and cycloadditions accounts for the formation of a range of fascinating natural products. Cascades consisting of 8π electrocyclizations followed by a 6π electrocyclization and a cycloaddition are relatively common. We now report the synthesis of the tetramic acid PF-1018 through an 8π electrocyclization, the product of which is immediately intercepted by a Diels-Alder cycloaddition. The success of this pericyclic cascade was critically dependent on the substitution pattern of the starting polyene and could be rationalized through DFT calculations. The completion of the synthesis required the instalment of a trisubstituted double bond by radical deoxygenation. An unexpected side product formed through 4-exo-trig radical cyclization could be recycled through an unprecedented triflation/fragmentation.
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Affiliation(s)
- Hugo Quintela-Varela
- Department of Chemistry, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13, 81377 Müchen (Germany),Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003 (USA)
| | - Cooper S. Jamieson
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095 (USA)
| | - Qianzhen Shao
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095 (USA),The College of Chemistry, Nankai University, Tianjin 300071 (China)
| | - K. N. Houk
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095 (USA)
| | - Dirk Trauner
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003 (USA)
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4
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Quintela‐Varela H, Jamieson CS, Shao Q, Houk KN, Trauner D. Bioinspired Synthesis of (−)‐PF‐1018. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201912452] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Hugo Quintela‐Varela
- Department of Chemistry Ludwig-Maximilians-Universität München Butenandtstrasse 5–13 81377 München Germany
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
| | - Cooper S. Jamieson
- Department of Chemistry and Biochemistry University of California, Los Angeles Los Angeles CA 90095 USA
| | - Qianzhen Shao
- Department of Chemistry and Biochemistry University of California, Los Angeles Los Angeles CA 90095 USA
- The College of Chemistry Nankai University Tianjin 300071 China
| | - K. N. Houk
- Department of Chemistry and Biochemistry University of California, Los Angeles Los Angeles CA 90095 USA
| | - Dirk Trauner
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
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5
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Theunissen C, Métayer B, Lecomte M, Henry N, Chan HC, Compain G, Gérard P, Bachmann C, Mokhtari N, Marrot J, Martin-Mingot A, Thibaudeau S, Evano G. Cationic polycyclization of ynamides: building up molecular complexity. Org Biomol Chem 2018; 15:4399-4416. [PMID: 28485455 DOI: 10.1039/c7ob00850c] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Polycyclization reactions are among the most efficient synthetic tools for the synthesis of complex, polycyclic molecules in a single operation from simple starting materials. We report in this manuscript a full account on the discovery and development of a novel cationic polycyclization from readily available ynamides. Simple activation of these building blocks under acidic conditions enables the generation of highly reactive activated keteniminium ions, which triggers an unprecedented cationic polycyclization yielding highly substituted polycyclic nitrogen heterocycles possessing up to seven fused cycles and three contiguous stereocenters.
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Affiliation(s)
- Cédric Theunissen
- Laboratoire de Chimie Organique, Service de Chimie et PhysicoChimie Organiques, Université libre de Bruxelles (ULB), Avenue F. D. Roosevelt 50, CP160/06, 1050 Brussels, Belgium.
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Marques AS, Marrot J, Chataigner I, Coeffard V, Vincent G, Moreau X. In Situ Generation of Cyclopentadienol Intermediates from 2,4-Dienals. Application to the Synthesis of Spirooxindoles via a Domino Polycyclization. Org Lett 2018; 20:792-795. [DOI: 10.1021/acs.orglett.7b03934] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Anne-Sophie Marques
- Institut
Lavoisier Versailles, UMR CNRS 8180, Université de Versailles-St-Quentin-en-Yvelines, Université Paris Saclay, 45 Avenue des États-Unis, Versailles 78035 Cedex, France
| | - Jérôme Marrot
- Institut
Lavoisier Versailles, UMR CNRS 8180, Université de Versailles-St-Quentin-en-Yvelines, Université Paris Saclay, 45 Avenue des États-Unis, Versailles 78035 Cedex, France
| | - Isabelle Chataigner
- Normandie Univ, UNIROUEN, INSA
Rouen, CNRS, COBRA (UMR 6014), 76000 Rouen, France
| | - Vincent Coeffard
- Université de Nantes, CNRS, Chimie Et Interdisciplinarité:
Synthèse, Analyse et Modélisation (CEISAM), UMR CNRS
6230, Faculté des Sciences et des Techniques, 2, rue de la Houssinière, BP 92208, Nantes 44322 Cedex 3, France
| | - Guillaume Vincent
- Institut
de Chimie Moléculaire et des Matériaux d’Orsay
(ICMMO), Université Paris-Sud, Université Paris-Saclay, CNRS UMR
8182, Orsay 91405 Cedex, France
| | - Xavier Moreau
- Institut
Lavoisier Versailles, UMR CNRS 8180, Université de Versailles-St-Quentin-en-Yvelines, Université Paris Saclay, 45 Avenue des États-Unis, Versailles 78035 Cedex, France
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Robertson J, Stevens K. Pyrrolizidine alkaloids: occurrence, biology, and chemical synthesis. Nat Prod Rep 2017; 34:62-89. [PMID: 27782262 DOI: 10.1039/c5np00076a] [Citation(s) in RCA: 103] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Covering: 2013 up to the end of 2015This review covers the isolation and structure of new pyrrolizidines; pyrrolizidine biosynthesis; biological activity, including the occurrence of pyrrolizidines as toxic components or contaminants in foods and beverages; and formal and total syntheses of naturally-occurring pyrrolizidine alkaloids and closely related non-natural analogues.
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Affiliation(s)
- Jeremy Robertson
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford, OX1 3TA, UK.
| | - Kiri Stevens
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford, OX1 3TA, UK.
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Ardkhean R, Caputo DFJ, Morrow SM, Shi H, Xiong Y, Anderson EA. Cascade polycyclizations in natural product synthesis. Chem Soc Rev 2016; 45:1557-69. [DOI: 10.1039/c5cs00105f] [Citation(s) in RCA: 185] [Impact Index Per Article: 23.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Cascade (domino) reactions have an unparalleled ability to generate molecular complexity from relatively simple starting materials; these transformations are particularly appealing when multiple rings are forged during this process.
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Affiliation(s)
| | | | | | - H. Shi
- Chemistry Research Laboratory
- Oxford
- UK
| | - Y. Xiong
- Chemistry Research Laboratory
- Oxford
- UK
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An JS, Shin WK, An DK. Quantitative Synthesis of Aldehydes from Weinreb Amides Using Lithium Diisobutyl-t-Butoxyaluminum Hydride (LDBBA). B KOREAN CHEM SOC 2015. [DOI: 10.1002/bkcs.10571] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Jae Sung An
- Department of Chemistry; Kangwon National University, and Institute for Molecular Science and Fusion Technology; Chunchon 200-701 Republic of Korea
| | - Won Kyu Shin
- Department of Chemistry; Kangwon National University, and Institute for Molecular Science and Fusion Technology; Chunchon 200-701 Republic of Korea
| | - Duk Keun An
- Department of Chemistry; Kangwon National University, and Institute for Molecular Science and Fusion Technology; Chunchon 200-701 Republic of Korea
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Jacob S, Brooks JL, Frontier AJ. No acid required: 4π and 6π electrocyclization reactions of dienyl diketones for the synthesis of cyclopentenones and 2H-Pyrans. J Org Chem 2014; 79:10296-302. [PMID: 25325706 PMCID: PMC4227568 DOI: 10.1021/jo501914w] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2014] [Indexed: 12/19/2022]
Abstract
The 1,6-conjugate addition of nucleophiles to dienyl diketones produces either cyclopentenone or 2H-pyran products with high selectivity through either Nazarov (4π) or 6π electrocyclization, respectively. The outcome of the reaction is dependent upon the nature of the nucleophile used. Nucleophiles that are anionic or easily deprotonated exclusively produce cyclopentenones via Nazarov cyclization, whereas the neutral nucleophile DABCO promotes 6π cyclization to afford 2H-pyrans. Experimental evidence is presented for both retro-4π and -6π electrocyclization in these systems, lending support to the bifurcated mechanistic hypothesis proposed for these cyclizations.
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Affiliation(s)
- Steven
D. Jacob
- Department of Chemistry, University of
Rochester, Rochester, New York 14627, United
States
| | - Joshua L. Brooks
- Department of Chemistry, University of
Rochester, Rochester, New York 14627, United
States
| | - Alison J. Frontier
- Department of Chemistry, University of
Rochester, Rochester, New York 14627, United
States
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Abstract
Important biomimetic steps in natural product synthesis have been promoted by transition metals, as exemplified by this beautiful ruthenium-catalyzed rearrangement of an endoperoxide into elysiapyrone A. Such reactions are supposed to occur during the biosynthesis, yet under different catalysis conditions.
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Affiliation(s)
- Xu-Wen Li
- Muséum National d'Histoire Naturelle and Centre National de la Recherche Scientifique
- Unité “Molécules de Communication et Adaptation des Micro-organismes” (UMR 7245 CNRS-MNHN)
- 75005 Paris, France
| | - Bastien Nay
- Muséum National d'Histoire Naturelle and Centre National de la Recherche Scientifique
- Unité “Molécules de Communication et Adaptation des Micro-organismes” (UMR 7245 CNRS-MNHN)
- 75005 Paris, France
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12
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Chang MY, Chan CK, Lin SY, Wu MH. One-pot synthesis of multisubstituted quaterphenyls and cyclopropanes. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.09.060] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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13
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Hanessian S, Dorich S, Menz H. Concise and Stereocontrolled Synthesis of the Tetracyclic Core of Daphniglaucin C. Org Lett 2013; 15:4134-7. [DOI: 10.1021/ol4018112] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Stephen Hanessian
- Department of Chemistry, Université de Montréal, P.O. Box 6128, Station Centre-ville, Montreal, QC, H3C 3J7, Canada
| | - Stéphane Dorich
- Department of Chemistry, Université de Montréal, P.O. Box 6128, Station Centre-ville, Montreal, QC, H3C 3J7, Canada
| | - Helge Menz
- Department of Chemistry, Université de Montréal, P.O. Box 6128, Station Centre-ville, Montreal, QC, H3C 3J7, Canada
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14
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Chang MY, Wu MH, Chen YL. One-Pot Synthesis of Substituted Tetrahydrocyclobuta[a]naphthalenes by Domino Aldol Condensation/Olefin Migration/Electrocyclization. Org Lett 2013; 15:2822-5. [DOI: 10.1021/ol401152w] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Meng-Yang Chang
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807, Taiwan
| | - Ming-Hao Wu
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807, Taiwan
| | - Yeh-Long Chen
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807, Taiwan
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