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Daus F, Xie X, Geyer A. The silica mineralisation properties of synthetic Silaffin-1A 1 ( synSil-1A 1). Org Biomol Chem 2022; 20:3387-3396. [PMID: 35362502 DOI: 10.1039/d2ob00390b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthetic monodisperse pentadecapeptide synSil-1A1 is a representative of the microdisperse mixture of the native silaffin natSil-1A1 produced by the diatom Cylindrotheca fusiformis. The octaphosphorylated zwitterionic synSil-1A1 is able to mineralise silica under slightly acidic conditions at pH 5.5, which is the physiologically relevant pH range assumed. Like the posttranslational modifications of the native silaffins, synSil-1A1 is functionalised on all four lysine and phosphorylated on all seven serine residues. We describe the synthesis of a trimethyl-δ-hydroxy-L-lysine building block, the incorporation of this choline-type amino acid in peptide synthesis and its phosphorylation, together with all further posttranslational modifications observed in the native silaffins. Quantitative structure-activity relationships from silicification experiments at high dilution reveal the unique mineralisation properties of the hyperphosphorylated peptide as a single substance and in interaction with long-chain polyamines (LCPA). Diffusion-ordered spectroscopy (DOSY) experiments reveal the formation of polyelectrolyte complexes (PEC) between synSil-1A1 and long-chain polyamines, which promotes the silicification process. The microdroplets have an overall balanced ratio of 100-150 cationic and the same number of anionic charges. The unique zwitterionic synSil-1A1 confirms the prevailing molecular model of biosilicification and validates it with quantitative data based on a single phosphopeptide species, avoiding the usual unphysiologically high concentrations of phosphate of many previous in vitro silicification experiments.
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Affiliation(s)
- Fabian Daus
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Straße 4, 35032 Marburg, Germany.
| | - Xiulan Xie
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Straße 4, 35032 Marburg, Germany.
| | - Armin Geyer
- Department of Chemistry, Philipps-Universität Marburg, Hans-Meerwein-Straße 4, 35032 Marburg, Germany.
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Kotha S, Todeti S. Synthesis of C 3-symmetric star-shaped molecules containing α-amino acids and dipeptides via Negishi coupling as a key step. Beilstein J Org Chem 2019; 15:371-377. [PMID: 30800186 PMCID: PMC6369998 DOI: 10.3762/bjoc.15.33] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Accepted: 01/21/2019] [Indexed: 12/23/2022] Open
Abstract
We demonstrate a new synthetic strategy toward star-shaped C3-symmetric molecules containing α-amino acid (AAA) derivatives and dipeptides. In this regard, trimerization and Negishi cross-coupling reactions are used as the key steps starting from readily available 4’-iodoacetophenone and L-serine. These C3-symmetric molecules containing AAA moieties are useful to design new ligands suitable for asymmetric synthesis and peptide dendrimers.
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Affiliation(s)
- Sambasivarao Kotha
- Department of Chemistry, Indian Institute of Technology-Bombay, Powai, Mumbai-400076, India
| | - Saidulu Todeti
- Department of Chemistry, Indian Institute of Technology-Bombay, Powai, Mumbai-400076, India
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6
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Teegardin KA, Gotcher L, Weaver JD. Formation of Non-Natural α,α-Disubstituted Amino Esters via Catalytic Michael Addition. Org Lett 2018; 20:7239-7244. [PMID: 30387616 DOI: 10.1021/acs.orglett.8b03161] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The enolate monoanion of amino esters is explored, and the first catalytic Michael addition of α-amino esters is demonstrated. These studies indicate that the acidity of the αC-H is the primary factor determining reactivity. Thus, polyfluorophenylglycine amino esters yield novel α-amino esters in the presence of a catalytic amount of a guanidine-derived base and Michael acceptors. Reactivity requires an acidic N-H, which is accomplished using common protecting groups such as N-Bz, N-Boc, and N-Cbz. Calculations and labeling experiments provide insight into the governing principles in which a key C-to-N proton transfer occurs, resulting in an expansion of the scope to include a number of natural amino esters. The study culminates with a late-stage functionalization of peptidic γ-secretase inhibitor, DAPT.
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Affiliation(s)
- Kip A Teegardin
- Department of Chemistry , Oklahoma State University , Stillwater , Oklahoma 74078 , United States
| | - Lacey Gotcher
- Department of Chemistry , Oklahoma State University , Stillwater , Oklahoma 74078 , United States
| | - Jimmie D Weaver
- Department of Chemistry , Oklahoma State University , Stillwater , Oklahoma 74078 , United States
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Hur J, Jang J, Sim J, Son WS, Ahn HC, Kim TS, Shin YH, Lim C, Lee S, An H, Kim SH, Oh DC, Jo EK, Jang J, Lee J, Suh YG. Conformation-Enabled Total Syntheses of Ohmyungsamycins A and B and Structural Revision of Ohmyungsamycin B. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201711286] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Joonseong Hur
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Jaebong Jang
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Jaehoon Sim
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
- College of Pharmacy; CHA University; 120 Haeryong-ro Pocheon Gyeonggi-do 11160 Republic of Korea
| | - Woo Sung Son
- College of Pharmacy; CHA University; 120 Haeryong-ro Pocheon Gyeonggi-do 11160 Republic of Korea
| | - Hee-Chul Ahn
- Department of Pharmacy; Dongguk University; Dongguk-ro 32 Ilsandong-gu, Goyang Geonggi-do 10326 Republic of Korea
| | - Tae Sung Kim
- Department of Microbiology; Chungnam National University School of Medicine; Munhwa-ro 266 Jungku Daejeon 35015 Republic of Korea
| | - Yern-Hyerk Shin
- Natural Products Research Institute; College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Changjin Lim
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
- College of Pharmacy; CHA University; 120 Haeryong-ro Pocheon Gyeonggi-do 11160 Republic of Korea
| | - Seungbeom Lee
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Hongchan An
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Seok-Ho Kim
- College of Pharmacy; CHA University; 120 Haeryong-ro Pocheon Gyeonggi-do 11160 Republic of Korea
| | - Dong-Chan Oh
- Natural Products Research Institute; College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Eun-Kyeong Jo
- Department of Microbiology; Chungnam National University School of Medicine; Munhwa-ro 266 Jungku Daejeon 35015 Republic of Korea
| | - Jichan Jang
- Division of Applied Life Science; Research Institute of Life Science; Gyeongsang National University; Jinju 52828 Republic of Korea
| | - Jeeyeon Lee
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
| | - Young-Ger Suh
- College of Pharmacy; Seoul National University; 1 Gwanak-ro Gwanak-gu Seoul 08826 Republic of Korea
- College of Pharmacy; CHA University; 120 Haeryong-ro Pocheon Gyeonggi-do 11160 Republic of Korea
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9
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Hur J, Jang J, Sim J, Son WS, Ahn HC, Kim TS, Shin YH, Lim C, Lee S, An H, Kim SH, Oh DC, Jo EK, Jang J, Lee J, Suh YG. Conformation-Enabled Total Syntheses of Ohmyungsamycins A and B and Structural Revision of Ohmyungsamycin B. Angew Chem Int Ed Engl 2018; 57:3069-3073. [PMID: 29380472 DOI: 10.1002/anie.201711286] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Revised: 12/28/2017] [Indexed: 01/06/2023]
Abstract
The first total syntheses of the bioactive cyclodepsipeptides ohmyungsamycin A and B are described. Key features of our synthesis include the concise preparation of a linear cyclization precursor that consists of N-methyl amides and non-proteinogenic amino acids, and its macrolactamization from a bent conformation. The proposed structure of ohmyungsamycin B was revised based on its synthesis. The cyclic core of the ohmyungsamycins was shown to be responsible for the excellent antituberculosis activity, and ohmyungsamycin variants with truncated chains were evaluated for their biological activity.
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Affiliation(s)
- Joonseong Hur
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Jaebong Jang
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Jaehoon Sim
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.,College of Pharmacy, CHA University, 120 Haeryong-ro, Pocheon, Gyeonggi-do, 11160, Republic of Korea
| | - Woo Sung Son
- College of Pharmacy, CHA University, 120 Haeryong-ro, Pocheon, Gyeonggi-do, 11160, Republic of Korea
| | - Hee-Chul Ahn
- Department of Pharmacy, Dongguk University, Dongguk-ro 32, Ilsandong-gu, Goyang, Geonggi-do, 10326, Republic of Korea
| | - Tae Sung Kim
- Department of Microbiology, Chungnam National University School of Medicine, Munhwa-ro 266, Jungku, Daejeon, 35015, Republic of Korea
| | - Yern-Hyerk Shin
- Natural Products Research Institute, College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Changjin Lim
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.,College of Pharmacy, CHA University, 120 Haeryong-ro, Pocheon, Gyeonggi-do, 11160, Republic of Korea
| | - Seungbeom Lee
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Hongchan An
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Seok-Ho Kim
- College of Pharmacy, CHA University, 120 Haeryong-ro, Pocheon, Gyeonggi-do, 11160, Republic of Korea
| | - Dong-Chan Oh
- Natural Products Research Institute, College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Eun-Kyeong Jo
- Department of Microbiology, Chungnam National University School of Medicine, Munhwa-ro 266, Jungku, Daejeon, 35015, Republic of Korea
| | - Jichan Jang
- Division of Applied Life Science, Research Institute of Life Science, Gyeongsang National University, Jinju, 52828, Republic of Korea
| | - Jeeyeon Lee
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea
| | - Young-Ger Suh
- College of Pharmacy, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.,College of Pharmacy, CHA University, 120 Haeryong-ro, Pocheon, Gyeonggi-do, 11160, Republic of Korea
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Abstract
Nannocystin A is a novel 21-membered macrolactone isolated from myxobacterium Nanocystis sp. It is a potent elongation factor 1 inhibitor and inhibits cancer cell line growth at nanomolar concentrations. In this work, a concise asymmetric total synthesis of nannocystin A has been developed, which features Sharpless epoxidation, Stille coupling, and final macrolactamization.
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Affiliation(s)
- Qiang Liu
- School of Pharmaceutical Sciences and Chongqing Key Laboratory of Natural Drug Research, Chongqing University , 55 Daxuecheng South Road, Shapingba, Chongqing 401331, PR China
| | - Ping Hu
- School of Pharmaceutical Sciences and Chongqing Key Laboratory of Natural Drug Research, Chongqing University , 55 Daxuecheng South Road, Shapingba, Chongqing 401331, PR China
| | - Yun He
- School of Pharmaceutical Sciences and Chongqing Key Laboratory of Natural Drug Research, Chongqing University , 55 Daxuecheng South Road, Shapingba, Chongqing 401331, PR China
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11
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Chuang KV, Kieffer ME, Reisman SE. A Mild and General Larock Indolization Protocol for the Preparation of Unnatural Tryptophans. Org Lett 2016; 18:4750-3. [PMID: 27598827 DOI: 10.1021/acs.orglett.6b02477] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A mild and general protocol for the Pd(0)-catalyzed heteroannulation of o-bromoanilines and alkynes is described. Application of a Pd(0)/P((t)Bu)3 catalyst system enables the efficient coupling of o-bromoanilines at 60 °C, mitigating deleterious side reactions and enabling access to a broad range of useful unnatural tryptophans. The utility of this new protocol is demonstrated in the highly convergent total synthesis of the bisindole natural product (-)-aspergilazine A.
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Affiliation(s)
- Kangway V Chuang
- The Warren and Katharine Schlinger Laboratory of Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology Pasadena, California 91125, United States
| | - Madeleine E Kieffer
- The Warren and Katharine Schlinger Laboratory of Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology Pasadena, California 91125, United States
| | - Sarah E Reisman
- The Warren and Katharine Schlinger Laboratory of Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology Pasadena, California 91125, United States
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