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Long Q, Zhou W, Zhou H, Tang Y, Chen W, Liu Q, Bian X. Polyamine-containing natural products: structure, bioactivity, and biosynthesis. Nat Prod Rep 2024; 41:525-564. [PMID: 37873660 DOI: 10.1039/d2np00087c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
Covering: 2005 to August, 2023Polyamine-containing natural products (NPs) have been isolated from a wide range of terrestrial and marine organisms and most of them exhibit remarkable and diverse activities, including antimicrobial, antiprotozoal, antiangiogenic, antitumor, antiviral, iron-chelating, anti-depressive, anti-inflammatory, insecticidal, antiobesity, and antioxidant properties. Their extraordinary activities and potential applications in human health and agriculture attract increasing numbers of studies on polyamine-containing NPs. In this review, we summarized the source, structure, classification, bioactivities and biosynthesis of polyamine-containing NPs, focusing on the biosynthetic mechanism of polyamine itself and representative polyamine alkaloids, polyamine-containing siderophores with catechol/hydroxamate/hydroxycarboxylate groups, nonribosomal peptide-(polyketide)-polyamine (NRP-(PK)-PA), and NRP-PK-long chain poly-fatty amine (lcPFAN) hybrid molecules.
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Affiliation(s)
- Qingshan Long
- Hunan Provincial Engineering and Technology Research Center for Agricultural Microbiology Application, Hunan Institute of Microbiology, Changsha, 410009, China.
| | - Wen Zhou
- Key Laboratory of Veterinary Chemical Drugs and Pharmaceutics, Ministry of Agriculture and Rural, Affairs, Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai 200241, China
| | - Haibo Zhou
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China.
| | - Ying Tang
- Hunan Provincial Engineering and Technology Research Center for Agricultural Microbiology Application, Hunan Institute of Microbiology, Changsha, 410009, China.
| | - Wu Chen
- College of Plant Protection, Hunan Agricultural University, Changsha, 410128, China.
| | - Qingshu Liu
- Hunan Provincial Engineering and Technology Research Center for Agricultural Microbiology Application, Hunan Institute of Microbiology, Changsha, 410009, China.
| | - Xiaoying Bian
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, 266237, China.
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Otsuka K, Miyahara M, Takaki S, Wakabayashi R, Miyako K, Irie R, Takamizawa S, Sakai R, Oikawa M. Synthetic Studies on the Initially Proposed Structure of Protoaculeine B: Discovery of Neuronally Active Heterotricyclic Amino Acids. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Kazunori Otsuka
- Yokohama City University College of Science: Yokohama Shiritsu Daigaku Rigakubu Graduate School of Nanobioscience JAPAN
| | - Masayoshi Miyahara
- Yokohama City University College of Science: Yokohama Shiritsu Daigaku Rigakubu Graduate School of Nanobioscience JAPAN
| | - Sara Takaki
- Yokohama City University College of Science: Yokohama Shiritsu Daigaku Rigakubu Graduate School of Nanobioscience JAPAN
| | - Ryoya Wakabayashi
- Yokohama City University College of Science: Yokohama Shiritsu Daigaku Rigakubu Graduate School of Nanobioscience JAPAN
| | - Kei Miyako
- Hokkaido University Faculty of Fisheries Sciences Graduate School of Fisheries Sciences School of Fisheries Sciences: Hokkaido Daigaku Daigakuin Suisan Kagaku Kenkyuin Daigakuin Suisan Kagakuin Suisan Gakubu Faculty of Fisheries Sciences JAPAN
| | - Raku Irie
- Yokohama City University College of Science: Yokohama Shiritsu Daigaku Rigakubu Graduate School of Nanobioscience JAPAN
| | - Satoshi Takamizawa
- Yokohama City University College of Science: Yokohama Shiritsu Daigaku Rigakubu Graduate School of Nanobioscience JAPAN
| | - Ryuichi Sakai
- Hokkaido University Faculty of Fisheries Sciences Graduate School of Fisheries Sciences School of Fisheries Sciences: Hokkaido Daigaku Daigakuin Suisan Kagaku Kenkyuin Daigakuin Suisan Kagakuin Suisan Gakubu Faculty of Fisheries Sciences JAPAN
| | - Masato Oikawa
- Yokohama City University Graduate School of Nanobioscience Seto 22-2Kanazawa-ku 236-0027 Yokohama JAPAN
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3
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Yang R, Yi D, Shen K, Fu Q, Wei J, Lu J, Yang L, Wang L, Wei S, Zhang Z. Indole and Pyrrole Derivatives as Pre-photocatalysts and Substrates in the Sulfonyl Radical-Triggered Relay Cyclization Leading to Sulfonylated Heterocycles. Org Lett 2022; 24:2014-2019. [DOI: 10.1021/acs.orglett.2c00472] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Ran Yang
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
| | - Dong Yi
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, China
| | - Kunrong Shen
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
| | - Qiang Fu
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
| | - Jun Wei
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
| | - Ji Lu
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
| | - Lin Yang
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
| | - Li Wang
- Department of Nuclear Medicine, Affiliated Hospital, Southwest Medical University, Luzhou 646000, China
| | - Siping Wei
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
- State Key Laboratory of Natural and Biomimetic Drugs, Peking University, Beijing 100191, China
| | - Zhijie Zhang
- Department of Medicinal Chemistry, School of Pharmacy, Southwest Medical University, Luzhou 646000, China
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Négrel S, Brunel JM. Synthesis and Biological Activities of Naturally Functionalized Polyamines: An Overview. Curr Med Chem 2021; 28:3406-3448. [PMID: 33138746 DOI: 10.2174/0929867327666201102114544] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Revised: 09/01/2020] [Accepted: 09/16/2020] [Indexed: 11/22/2022]
Abstract
Recently, extensive researches have emphasized the fact that polyamine conjugates are becoming important in all biological and medicinal fields. In this review, we will focus our attention on natural polyamines and highlight recent progress in both fundamental mechanism studies and interests in the development and application for the therapeutic use of polyamine derivatives.
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Affiliation(s)
- Sophie Négrel
- Aix Marseille University, Faculty of Pharmacy, UMR-MD1, 27 bd Jean Moulin, 13385 Marseille, France
| | - Jean Michel Brunel
- Aix Marseille University, Faculty of Pharmacy, UMR-MD1, 27 bd Jean Moulin, 13385 Marseille, France
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5
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Irie R, Miyako K, Matsunaga S, Sakai R, Oikawa M. Structure Revision of Protoaculeine B, a Post-translationally Modified N-Terminal Residue in the Peptide Toxin Aculeine B. JOURNAL OF NATURAL PRODUCTS 2021; 84:1203-1209. [PMID: 33787261 DOI: 10.1021/acs.jnatprod.0c01280] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The structure of protoaculeine B, the N-terminal residue of the marine peptide toxin aculeine B, is revised to the cis-1,3-disubstituted tetrahydro-β-carboline framework. We prepared two truncated model compounds that lack a long-chain polyamine using the one-step Pictet-Spengler reaction of tryptophan and compared their NMR, mass spectra, and chemical reactivity with those of the natural protoaculeine B. The synthetic models reproduced the profiles of the natural product well, which confirmed the appropriateness of the structure revision.
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Affiliation(s)
- Raku Irie
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Kei Miyako
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Satoko Matsunaga
- National Institute of Technology, Hakodate College, Hakodate 042-8501, Japan
| | - Ryuichi Sakai
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Masato Oikawa
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
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Nakamura E, Ozaki N, Oaki Y, Imai H. Cellulose intrafibrillar mineralization of biological silica in a rice plant. Sci Rep 2021; 11:7886. [PMID: 33846494 PMCID: PMC8042044 DOI: 10.1038/s41598-021-87144-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Accepted: 03/17/2021] [Indexed: 11/09/2022] Open
Abstract
The essence of morphological design has been a fascinating scientific problem with regard to understanding biological mineralization. Particularly shaped amorphous silicas (plant opals) play an important role in the vital activity in rice plants. Although various organic matters are associated with silica accumulation, their detailed functions in the shape-controlled mineralization process have not been sufficiently clarified. In the present study, cellulose nanofibers (CNFs) were found to be essential as a scaffold for silica accumulation in rice husks and leaf blades. Prior to silicification, CNFs ~ 10 nm wide are sparsely stacked in a space between the epidermal cell wall and the cuticle layer. Silica nanoparticles 20-50 nm in diameter are then deposited in the framework of the CNFs. The shape-controlled plant opals are formed through the intrafibrillar mineralization of silica nanoparticles on the CNF scaffold.
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Affiliation(s)
- Eri Nakamura
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Noriaki Ozaki
- Department of Biotechnology, Faculty of Bioresource Sciences, Akita Prefectural University, 241-438 Kaidobata-Nishi, Nakano Shimoshinjo, Akita, 010-0195, Japan
| | - Yuya Oaki
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan
| | - Hiroaki Imai
- Department of Applied Chemistry, Faculty of Science and Technology, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, 223-8522, Japan.
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Irie R, Miyahara M, Nakamura S, Honda A, Sakai R, Oikawa M. Total Synthesis of the Proposed Structure for Protoaculeine B, a Polycationic Marine Sponge Metabolite, with a Homogeneous Long-Chain Polyamine. JOURNAL OF NATURAL PRODUCTS 2020; 83:2769-2775. [PMID: 32869997 DOI: 10.1021/acs.jnatprod.0c00761] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
By establishing the procedures for sequential deprotections, reaction monitoring, purification, and handling, for the first time, we achieved the total synthesis of the proposed structure for protoaculeine B (2), which is a highly hydrophilic and polycationic amino acid. The NMR and mass spectra and chemical reactivity of the synthetic sample differed from those of natural protoaculeine B, which indicates the necessity for revision of the originally reported structure.
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Affiliation(s)
- Raku Irie
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Masayoshi Miyahara
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Shota Nakamura
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Akito Honda
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Ryuichi Sakai
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Masato Oikawa
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
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8
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Miyahara M, Shiozaki H, Tukada H, Ishikawa Y, Oikawa M. Photoremovable NPEC group compatible with Ns protecting group in polyamine synthesis. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.10.045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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9
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Shiozaki H, Miyahara M, Otsuka K, Miyako K, Honda A, Takasaki Y, Takamizawa S, Tukada H, Ishikawa Y, Sakai R, Oikawa M. Studies on Aculeines: Synthetic Strategy to the Fully Protected Protoaculeine B, the N-Terminal Amino Acid of Aculeine B. Org Lett 2018; 20:3403-3407. [DOI: 10.1021/acs.orglett.8b01331] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hiroki Shiozaki
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Masayoshi Miyahara
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Kazunori Otsuka
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Kei Miyako
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Akito Honda
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Yuichi Takasaki
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Satoshi Takamizawa
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Hideyuki Tukada
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Yuichi Ishikawa
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
| | - Ryuichi Sakai
- Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan
| | - Masato Oikawa
- Yokohama City University, Seto 22-2, Kanazawa-ku, Yokohama 236-0027, Japan
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Abstract
This review covers the literature published in 2014 for marine natural products (MNPs), with 1116 citations (753 for the period January to December 2014) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1378 in 456 papers for 2014), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- Department of Chemistry, University of Canterbury, Christchurch, New Zealand.
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Lood CS, Laine AE, Högnäsbacka A, Nieger M, Koskinen AMP. Synthesis of Chiral (Indol-2-yl)methanamines and Insight into the Stereochemistry Protecting Effects of the 9-Phenyl-9-fluorenyl Protecting Group. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500391] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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