1
|
Berglund S, Bassy C, Kaya I, Andrén PE, Shtender V, Lasagna M, Tommos C, Magnuson A, Glover SD. Hydrogen production by a fully de novo enzyme. Dalton Trans 2024; 53:12905-12916. [PMID: 38900585 PMCID: PMC11301571 DOI: 10.1039/d4dt00936c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Accepted: 06/04/2024] [Indexed: 06/22/2024]
Abstract
Molecular catalysts based on abundant elements that function in neutral water represent an essential component of sustainable hydrogen production. Artificial hydrogenases based on protein-inorganic hybrids have emerged as an intriguing class of catalysts for this purpose. We have prepared a novel artificial hydrogenase based on cobaloxime bound to a de novo three alpha-helical protein, α3C, via a pyridyl-based unnatural amino acid. The functionalized de novo protein was characterised by UV-visible, CD, and EPR spectroscopy, as well as MALDI spectrometry, which confirmed the presence and ligation of cobaloxime to the protein. The new de novo enzyme produced hydrogen under electrochemical, photochemical and reductive chemical conditions in neutral water solution. A change in hydrogen evolution capability of the de novo enzyme compared with native cobaloxime was observed, with turnover numbers around 80% of that of cobaloxime, and hydrogen evolution rates of 40% of that of cobaloxime. We discuss these findings in the context of existing literature, how our study contributes important information about the functionality of cobaloximes as hydrogen evolving catalysts in protein environments, and the feasibility of using de novo proteins for development into artificial metalloenzymes. Small de novo proteins as enzyme scaffolds have the potential to function as upscalable bioinspired catalysts thanks to their efficient atom economy, and the findings presented here show that these types of novel enzymes are a possible product.
Collapse
Affiliation(s)
- Sigrid Berglund
- Physical Chemistry, Department of Chemistry, Ångström Laboratory, Uppsala University, Box 523, SE-75120, Uppsala, Sweden.
| | - Clara Bassy
- Physical Chemistry, Department of Chemistry, Ångström Laboratory, Uppsala University, Box 523, SE-75120, Uppsala, Sweden.
| | - Ibrahim Kaya
- Department of Pharmaceutical Biosciences, Spatial Mass Spectrometry, Science for Life Laboratory, Uppsala University, Box 591, SE-75124 Uppsala, Sweden
| | - Per E Andrén
- Department of Pharmaceutical Biosciences, Spatial Mass Spectrometry, Science for Life Laboratory, Uppsala University, Box 591, SE-75124 Uppsala, Sweden
| | - Vitalii Shtender
- Division of Applied Materials Science, Department of Materials Science and Engineering, Uppsala University, 75103 Uppsala, Sweden
| | - Mauricio Lasagna
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA
| | - Cecilia Tommos
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA
| | - Ann Magnuson
- Molecular Biomimetics, Department of Chemistry, Ångström Laboratory, Uppsala University, Box 523, SE-75120, Uppsala, Sweden
| | - Starla D Glover
- Physical Chemistry, Department of Chemistry, Ångström Laboratory, Uppsala University, Box 523, SE-75120, Uppsala, Sweden.
| |
Collapse
|
2
|
Kohler L, Niklas J, Johnson RC, Zeller M, Poluektov OG, Mulfort KL. Molecular Cobalt Catalysts for H2 Generation with Redox Activity and Proton Relays in the Second Coordination Sphere. Inorg Chem 2018; 58:1697-1709. [DOI: 10.1021/acs.inorgchem.8b03297] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Lars Kohler
- Division of Chemical Sciences and Engineering, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| | - Jens Niklas
- Division of Chemical Sciences and Engineering, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| | - Ryan C. Johnson
- Division of Chemical Sciences and Engineering, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| | - Matthias Zeller
- Department of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, Indiana 47907, United States
| | - Oleg G. Poluektov
- Division of Chemical Sciences and Engineering, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| | - Karen L. Mulfort
- Division of Chemical Sciences and Engineering, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, United States
| |
Collapse
|
3
|
Basu D, Mazumder S, Niklas J, Baydoun H, Wanniarachchi D, Shi X, Staples RJ, Poluektov O, Schlegel HB, Verani CN. Evaluation of the coordination preferences and catalytic pathways of heteroaxial cobalt oximes towards hydrogen generation. Chem Sci 2016; 7:3264-3278. [PMID: 29997819 PMCID: PMC6006490 DOI: 10.1039/c5sc04214c] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2015] [Accepted: 01/30/2016] [Indexed: 11/25/2022] Open
Abstract
Three new heteroaxial cobalt oxime catalysts, namely [CoIII(prdioxH)(4tBupy)(Cl)]PF6 (1), [CoIII(prdioxH)(4Pyrpy)(Cl)]PF6 (2), and [CoIII(prdioxH)(4Bzpy)(Cl)]PF6 (3) have been studied. These species contain chloro and substituted tert-butyl/pyrrolidine/benzoyl-pyridino ligands axially coordinated to a trivalent cobalt ion bound to the N4-oxime macrocycle (2E,2'E,3E,3'E)-3,3'-(propane-1,3-diylbis(azanylylidene))bis(butan-2-one)dioxime, abbreviated (prdioxH)- in its monoprotonated form. Emphasis was given to the spectroscopic investigation of the coordination preferences and spin configurations among the different 3d6 CoIII, 3d7 CoII, and 3d8 CoI oxidation states of the metal, and to the catalytic proton reduction with an evaluation of the pathways for the generation of H2via CoIII-H- or CoII-H- intermediates by mono and bimetallic routes. The strong field imposed by the (prdioxH)- ligand precludes the existence of high-spin configurations, and 6-coordinate geometry is favored by the LSCoIII species. Species 1 and 3 show a split CoIII/CoII electrochemical wave associated with partial chemical conversion to a [CoIII(prdioxH)Cl2] species, whereas 2 shows a single event. The reduction of these CoIII complexes yields LSCoII and LSCoI species in which the pyridine acts as the dominant axial ligand. In the presence of protons, the catalytically active CoI species generates a CoIII-H- hydride species that reacts heterolytically with another proton to generate dihydrogen. The intermediacy of a trifluoroacetate-bound CoIII/CoII couple in the catalytic mechanism is proposed. These results allow for a generalization of the behavior of heteroaxial cobalt macrocycles and serve as guidelines for the development of new catalysts based on macrocyclic frameworks.
Collapse
Affiliation(s)
- Debashis Basu
- Department of Chemistry , Wayne State University , Detroit , MI 48202 , USA .
| | - Shivnath Mazumder
- Department of Chemistry , Wayne State University , Detroit , MI 48202 , USA .
| | - Jens Niklas
- Chemical Sciences and Engineering Division , Argonne National Laboratory , Argonne , IL 60439 , USA
| | - Habib Baydoun
- Department of Chemistry , Wayne State University , Detroit , MI 48202 , USA .
| | | | - Xuetao Shi
- Department of Chemistry , Wayne State University , Detroit , MI 48202 , USA .
| | - Richard J Staples
- Department of Chemistry , Michigan State University , Lansing , MI 48824 , USA
| | - Oleg Poluektov
- Chemical Sciences and Engineering Division , Argonne National Laboratory , Argonne , IL 60439 , USA
| | - H Bernhard Schlegel
- Department of Chemistry , Wayne State University , Detroit , MI 48202 , USA .
| | - Cláudio N Verani
- Department of Chemistry , Wayne State University , Detroit , MI 48202 , USA .
| |
Collapse
|
4
|
EPR and XANES studies of anaerobic photolysis of iso-propilpyridinecobaloxime: Elucidation of the reactivity of the Co(II) primary product. J Organomet Chem 2014. [DOI: 10.1016/j.jorganchem.2014.01.033] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
5
|
Cropek DM, Metz A, Müller AM, Gray HB, Horne T, Horton DC, Poluektov O, Tiede DM, Weber RT, Jarrett WL, Phillips JD, Holder AA. A novel ruthenium(II)-cobaloxime supramolecular complex for photocatalytic H2 evolution: synthesis, characterisation and mechanistic studies. Dalton Trans 2012; 41:13060-73. [PMID: 23001132 PMCID: PMC3482109 DOI: 10.1039/c2dt30309d] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the synthesis and characterization of novel mixed-metal binuclear ruthenium(II)-cobalt(II) photocatalysts for hydrogen evolution in acidic acetonitrile. First, 2-(2'-pyridyl)benzothiazole (pbt), 1, was reacted with RuCl(3)·xH(2)O to produce [Ru(pbt)(2)Cl(2)]·0.25CH(3)COCH(3), 2, which was then reacted with 1,10-phenanthroline-5,6-dione (phendione), 3, in order to produce [Ru(pbt)(2)(phendione)](PF(6))(2)·4H(2)O, 4. Compound 4 was then reacted with 4-pyridinecarboxaldehyde in order to produce [Ru(pbt)(2)(L-pyr)](PF(6))(2)·9.5H(2)O, 5 (where L-pyr = (4-pyridine)oxazolo[4,5-f]phenanthroline). Compound 5 was then reacted with [Co(dmgBF(2))(2)(H(2)O)(2)] (where dmgBF(2) = difluoroboryldimethylglyoximato) in order to produce the mixed-metal binuclear complex, [Ru(pbt)(2)(L-pyr)Co(dmgBF(2))(2)(H(2)O)](PF(6))(2)·11H(2)O·1.5CH(3)COCH(3), 6. [Ru(Me(2)bpy)(2)(L-pyr)Co(dmgBF(2))(2)(OH(2))](PF(6))(2), 7 (where Me(2)bpy = 1,10-phenanthroline, 4,4'-dimethyl-2,2'-bipyridine) and [Ru(phen)(2)(L-pyr)Co(dmgBF(2))(2)(OH(2))](PF(6))(2), 8 were also synthesised. All complexes were characterized by elemental analysis, ESI MS, HRMS, UV-visible absorption, (11)B, (19)F, and (59)Co NMR, ESR spectroscopy, and cyclic voltammetry, where appropriate. Photocatalytic studies carried out in acidified acetonitrile demonstrated constant hydrogen generation longer than a 42 hour period as detected by gas chromatography. Time resolved spectroscopic measurements were performed on compound 6, which proved an intramolecular electron transfer from an excited Ru(II) metal centre to the Co(II) metal centre via the bridging L-pyr ligand. This resulted in the formation of a cobalt(I)-containing species that is essential for the production of H(2) gas in the presence of H(+) ions. A proposed mechanism for the generation of hydrogen is presented.
Collapse
Affiliation(s)
- Donald M. Cropek
- U.S. Army Corps of Engineers, Construction Engineering Research Laboratory, Champaign, IL 61822, U.S.A
| | - Anja Metz
- U.S. Army Corps of Engineers, Construction Engineering Research Laboratory, Champaign, IL 61822, U.S.A
| | - Astrid M. Müller
- California Institute of Technology, Beckman Institute, Pasadena, CA 91125, U.S.A
| | - Harry B. Gray
- California Institute of Technology, Beckman Institute, Pasadena, CA 91125, U.S.A
| | - Toyketa Horne
- Department of Chemistry and Biochemistry, The University of Southern Mississippi, 118 College Drive, # 5043, Hattiesburg, Mississippi 39406-0001, U.S.A. telephone: 601-266-4767, and fax: 601-266-6075
| | - Dorothy C. Horton
- Department of Chemistry and Biochemistry, The University of Southern Mississippi, 118 College Drive, # 5043, Hattiesburg, Mississippi 39406-0001, U.S.A. telephone: 601-266-4767, and fax: 601-266-6075
| | - Oleg Poluektov
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, IL 60439, U.S.A
| | - David M. Tiede
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, IL 60439, U.S.A
| | - Ralph T. Weber
- EPR Division Bruker BioSpin, 44 Manning Road, Billerica, MA 01821, U.S.A
| | - William L. Jarrett
- School of Polymers and High-Performance Materials, The University of Southern Mississippi, 118 College Dive, #5050, Hattiesburg, MS 39406-0076, U.S.A
| | - Joshua D. Phillips
- Department of Chemistry and Biochemistry, The University of Southern Mississippi, 118 College Drive, # 5043, Hattiesburg, Mississippi 39406-0001, U.S.A. telephone: 601-266-4767, and fax: 601-266-6075
| | - Alvin A. Holder
- Department of Chemistry and Biochemistry, The University of Southern Mississippi, 118 College Drive, # 5043, Hattiesburg, Mississippi 39406-0001, U.S.A. telephone: 601-266-4767, and fax: 601-266-6075
| |
Collapse
|
6
|
Niklas J, Mardis KL, Rakhimov RR, Mulfort KL, Tiede DM, Poluektov OG. The hydrogen catalyst cobaloxime: a multifrequency EPR and DFT study of cobaloxime's electronic structure. J Phys Chem B 2012; 116:2943-57. [PMID: 22375846 DOI: 10.1021/jp209395n] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Solar fuels research aims to mimic photosynthesis and devise integrated systems that can capture, convert, and store solar energy in the form of high-energy molecular bonds. Molecular hydrogen is generally considered an ideal solar fuel because its combustion is essentially pollution-free. Cobaloximes rank among the most promising earth-abundant catalysts for the reduction of protons to molecular hydrogen. We have used multifrequency EPR spectroscopy at X-band, Q-band, and D-band combined with DFT calculations to reveal electronic structure and establish correlations among the structure, surroundings, and catalytic activity of these complexes. To assess the strength and nature of ligand cobalt interactions, the BF(2)-capped cobaloxime, Co(dmgBF(2))(2), was studied in a variety of different solvents with a range of polarities and stoichiometric amounts of potential ligands to the cobalt ion. This allows the differentiation of labile and strongly coordinating axial ligands for the Co(II) complex. Labile, or weakly coordinating, ligands such as methanol result in larger g-tensor anisotropy than strongly coordinating ligands such as pyridine. In addition, a coordination number effect is seen for the strongly coordinating ligands with both singly ligated LCo(dmgBF(2))(2) and doubly ligated L(2)Co(dmgBF(2))(2) . The presence of two strongly coordinating axial ligands leads to the smallest g-tensor anisotropy. The relevance of the strength of the axial ligand(s) to the catalytic efficiency of Co(dmgBF(2))(2) is discussed. Finally, the influence of molecular oxygen and formation of Co(III) superoxide radicals LCo(dmgBF(2))(2)O(2)(•) is studied. The experimental results are compared with a comprehensive set of DFT calculations on Co(dmgBF(2))(2) model systems with various axial ligands. Comparison with experimental values for the "key" magnetic parameters such as g-tensor and (59)Co hyperfine coupling tensor allows the determination of the conformation of the axially ligated Co(dmgBF(2))(2) complexes. The data presented here are vital for understanding the influence of solvent and ligand coordination on the catalytic efficiency of cobaloximes.
Collapse
Affiliation(s)
- Jens Niklas
- Division of Chemical Sciences and Engineering, Argonne National Laboratory, Argonne, Illinois 60439, USA.
| | | | | | | | | | | |
Collapse
|
7
|
Gomes J, Castro BD, Rangel M. EPR Study of the Photolysis of Methyl- and Adenosylcobinamides in the Presence of Phosphine and Pyridine Bases. Evidence for the Need of a Judicious Choice of Irradiation Temperature and Solvent to Assess Ligand Binding. Organometallics 2008. [DOI: 10.1021/om700837d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- João Gomes
- Requimte, Departamento de Química, Faculdade de Ciências, Universidade do Porto, 4160-007 Porto, Portugal, and Requimte, Instituto de Ciências Biomédicas de Abel Salazar, Universidade do Porto, 4099-003 Porto, Portugal
| | - Baltazar de Castro
- Requimte, Departamento de Química, Faculdade de Ciências, Universidade do Porto, 4160-007 Porto, Portugal, and Requimte, Instituto de Ciências Biomédicas de Abel Salazar, Universidade do Porto, 4099-003 Porto, Portugal
| | - Maria Rangel
- Requimte, Departamento de Química, Faculdade de Ciências, Universidade do Porto, 4160-007 Porto, Portugal, and Requimte, Instituto de Ciências Biomédicas de Abel Salazar, Universidade do Porto, 4099-003 Porto, Portugal
| |
Collapse
|
8
|
Stolzenberg AM, Workman SR, Gutshall JE, Petersen JL, Akhmedov N. Syntheses and characterization of organo-group 14 cobaloxime compounds. Inorg Chem 2007; 46:6744-54. [PMID: 17616181 DOI: 10.1021/ic070251+] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Reactions of cobaloxime Na[(t-BuPy)Co(DH)2] with Ph3ECl (E = Si, Ge, Sn, and Pb) were investigated. Metal-metal bonded complexes (t-BuPy)Co(DH)2EPh3 were isolated for E = Sn and Pb. (t-BuPy)Co(DH)2SnPh3.(C2H5)2O, C39H52CoN5O5Sn, crystallized in the monoclinic space group P21/c (Z = 4) with unit cell dimensions a = 11.6443(6) A, b = 15.6085(8) A, c = 22.6354(12) A, beta = 96.634(1) degrees , and V = 4086.4(4) A3 at 295(2) K. The structure resembled those of six-coordinate alkyl cobaloxime complexes and had Co-NPy and Co-Sn distances of 2.056(2) and 2.5568(3) A, respectively. (t-BuPy)Co(DH)2PbPh3, C35H42CoN5O4Pb, crystallized in the monoclinic space group P21/n (Z = 4) with unit cell dimensions a = 15.0104(7) A, b = 15.7693(8) A, c = 16.6230(8) A, beta = 114.348(1) degrees , and V = 3584.8(3) A3 at 295(2) K. The complex was nearly isostructural with the Sn analogue and had Co-NPy and Co-Pb distances of 2.049(2) and 2.6191(4) A, respectively. Coupling of the ortho phenyl protons to the spin 1/2 isotopes of Sn and of Pb was a characteristic feature of the 1H NMR spectrum. Additional, longer range couplings were observed for the Pb complex and for both complexes in the 13C NMR. Metal-metal bonded complexes were not obtained for E = Si or Ge. The products isolated in the latter case were the hydride Ph3GeH and the cobalt(II) complex (t-BuPy)Co(DH)2,C17H27CoN5O4, which crystallized in the orthorhombic space group Pbcn (Z = 8). Unit cell dimensions were a = 17.9821(11) A, b = 9.7449(6) A, c = 22.7374(15) A, and V = 3984.4(4) A3 at 295(2) K. The five-coordinate complex had Co-NPy = 2.096(2) A and was dimeric in the lattice.
Collapse
Affiliation(s)
- Alan M Stolzenberg
- Department of Chemistry, West Virginia University, Morgantown, WV 26506, USA.
| | | | | | | | | |
Collapse
|