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Camacho-Mendoza RL, Aquino-Torres E, Cordero-Pensado V, Cruz-Borbolla J, Alvarado-Rodríguez JG, Thangarasu P, Gómez-Castro CZ. A new computational model for the prediction of toxicity of phosphonate derivatives using QSPR. Mol Divers 2018. [PMID: 29532429 DOI: 10.1007/s11030-018-9819-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Structural and electronic properties of a series of 25 phosphonate derivatives were analyzed applying density functional theory, with the exchange-correlation functional PBEPBE in combination with the 6-311++G** basis set for all atoms. The chemical reactivity of these derivatives has been interpreted using quantum descriptors such as frontier molecular orbitals (HOMO, LUMO), Hirshfeld charges, molecular electrostatic potential, and the dual descriptor [[Formula: see text]]. These descriptors are directly related to experimental median lethal dose ([Formula: see text], expressed as its decimal logarithm [[Formula: see text]([Formula: see text]] through a multiple linear regression equation. The proposed model predicts the toxicity of phosphonates in function of the volume (V), the load of the most electronegative atom of the molecule (q), and the eigenvalue of the molecular orbital HOMO ([Formula: see text]. The obtained values in the internal validation of the model are: [Formula: see text]%, [Formula: see text]%, [Formula: see text], [Formula: see text], [Formula: see text], [Formula: see text], [Formula: see text], and [Formula: see text]%. The toxicity of nine phosphonate derivatives used as test molecules was adequately predicted by the model. The theoretical results indicate that the oxygen atom of the O=P group plays an important role in the interaction mechanism between the phosphonate and the acetylcholinesterase enzyme, inhibiting the removal of the proton of the ser-200 residue by the his-440 residue.
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Affiliation(s)
- Rosa L Camacho-Mendoza
- Área Académica de Química, Universidad Autónoma del Estado de Hidalgo, Ciudad del Conocimiento, km 4.5 Carretera Pachuca-Tulancingo, C.P. 42184, Mineral de la Reforma Hidalgo, Mexico
| | - Eliazar Aquino-Torres
- Área Académica de Química, Universidad Autónoma del Estado de Hidalgo, Ciudad del Conocimiento, km 4.5 Carretera Pachuca-Tulancingo, C.P. 42184, Mineral de la Reforma Hidalgo, Mexico
| | - Viviana Cordero-Pensado
- Área Académica de Química, Universidad Autónoma del Estado de Hidalgo, Ciudad del Conocimiento, km 4.5 Carretera Pachuca-Tulancingo, C.P. 42184, Mineral de la Reforma Hidalgo, Mexico
| | - Julián Cruz-Borbolla
- Área Académica de Química, Universidad Autónoma del Estado de Hidalgo, Ciudad del Conocimiento, km 4.5 Carretera Pachuca-Tulancingo, C.P. 42184, Mineral de la Reforma Hidalgo, Mexico.
| | - José G Alvarado-Rodríguez
- Área Académica de Química, Universidad Autónoma del Estado de Hidalgo, Ciudad del Conocimiento, km 4.5 Carretera Pachuca-Tulancingo, C.P. 42184, Mineral de la Reforma Hidalgo, Mexico
| | - Pandiyan Thangarasu
- Facultad de Química, Universidad Nacional Autónoma de México, Ciudad Universitaria, C.P. 04510, Mexico City, Mexico
| | - Carlos Z Gómez-Castro
- Universidad Autónoma del Estado de Hidalgo, Ciudad del Conocimiento, C.P. 42184, Mineral de la Reforma, Hidalgo, Mexico
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Jang YJ, Kim K, Tsay OG, Atwood DA, Churchill DG. Update 1 of: Destruction and Detection of Chemical Warfare Agents. Chem Rev 2015; 115:PR1-76. [DOI: 10.1021/acs.chemrev.5b00402] [Citation(s) in RCA: 249] [Impact Index Per Article: 27.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Yoon Jeong Jang
- Molecular Logic Gate Laboratory, Department of Chemistry, KAIST, Daejeon, 305-701, Republic of Korea
| | - Kibong Kim
- Molecular Logic Gate Laboratory, Department of Chemistry, KAIST, Daejeon, 305-701, Republic of Korea
| | - Olga G. Tsay
- Molecular Logic Gate Laboratory, Department of Chemistry, KAIST, Daejeon, 305-701, Republic of Korea
| | - David A. Atwood
- Department of Chemistry, University of Kentucky, Lexington, Kentucky 40506-0055, United States
| | - David G. Churchill
- Molecular Logic Gate Laboratory, Department of Chemistry, KAIST, Daejeon, 305-701, Republic of Korea
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), 373-1 Guseong-dong, Yuseong-gu, Daejeon, 305−701, Republic of Korea
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Kim K, Tsay OG, Atwood DA, Churchill DG. Destruction and detection of chemical warfare agents. Chem Rev 2011; 111:5345-403. [PMID: 21667946 DOI: 10.1021/cr100193y] [Citation(s) in RCA: 569] [Impact Index Per Article: 43.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Kibong Kim
- Molecular Logic Gate Laboratory, Department of Chemistry, KAIST, Daejeon, 305-701, Republic of Korea
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Kilyanek SM, Fang X, Jordan RF. Synthesis and Reactivity of a Tetragallium Macrocycle. Organometallics 2008. [DOI: 10.1021/om800902d] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Stefan M. Kilyanek
- Department of Chemistry, The University of Chicago, 5735 S. Ellis Avenue, Chicago, Illinois 60637
| | - Xiangdong Fang
- Department of Chemistry, The University of Chicago, 5735 S. Ellis Avenue, Chicago, Illinois 60637
| | - Richard F. Jordan
- Department of Chemistry, The University of Chicago, 5735 S. Ellis Avenue, Chicago, Illinois 60637
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Samanamu CR, Zamora EN, Montchamp JL, Richards AF. Synthesis of homo and hetero metal-phosphonate frameworks from bi-functional aminomethylphosphonic acid. J SOLID STATE CHEM 2008. [DOI: 10.1016/j.jssc.2008.03.023] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Taylor TJ, Burress CN, Gabbaï FP. Lewis Acidic Behavior of Fluorinated Organomercurials. Organometallics 2007. [DOI: 10.1021/om070125d] [Citation(s) in RCA: 84] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Thomas J. Taylor
- Department of Chemistry, Texas A&M University, 3255 TAMU, College Station, Texas 77843-3255
| | - Charlotte N. Burress
- Department of Chemistry, Texas A&M University, 3255 TAMU, College Station, Texas 77843-3255
| | - François P. Gabbaï
- Department of Chemistry, Texas A&M University, 3255 TAMU, College Station, Texas 77843-3255
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Venkatasubbaiah K, Bats JW, Rheingold AL, Jäkle F. Rational Synthesis and Complexation Behavior of the Bidentate Lewis Acid 1,2-Bis(chloromercury)ferrocene. Organometallics 2005. [DOI: 10.1021/om0506567] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Krishnan Venkatasubbaiah
- Department of Chemistry, Rutgers University−Newark, 73 Warren Street, Newark, New Jersey 07102, Department of Chemistry and Biochemistry, Institut für Organische Chemie, Johann Wolfgang Goethe-Universität Frankfurt, Marie-Curie-Strasse 11, D-60439 Frankfurt am Main, Germany, and University of California, San Diego, La Jolla, California 92093
| | - Jan W. Bats
- Department of Chemistry, Rutgers University−Newark, 73 Warren Street, Newark, New Jersey 07102, Department of Chemistry and Biochemistry, Institut für Organische Chemie, Johann Wolfgang Goethe-Universität Frankfurt, Marie-Curie-Strasse 11, D-60439 Frankfurt am Main, Germany, and University of California, San Diego, La Jolla, California 92093
| | - Arnold L. Rheingold
- Department of Chemistry, Rutgers University−Newark, 73 Warren Street, Newark, New Jersey 07102, Department of Chemistry and Biochemistry, Institut für Organische Chemie, Johann Wolfgang Goethe-Universität Frankfurt, Marie-Curie-Strasse 11, D-60439 Frankfurt am Main, Germany, and University of California, San Diego, La Jolla, California 92093
| | - Frieder Jäkle
- Department of Chemistry, Rutgers University−Newark, 73 Warren Street, Newark, New Jersey 07102, Department of Chemistry and Biochemistry, Institut für Organische Chemie, Johann Wolfgang Goethe-Universität Frankfurt, Marie-Curie-Strasse 11, D-60439 Frankfurt am Main, Germany, and University of California, San Diego, La Jolla, California 92093
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Tsunoda M, Gabbaï FP. Complexation of methylparathion and bis(2-hydroxyethyl)sulfide by the tridentate lewis acid [(o-C6F4Hg)3]. HETEROATOM CHEMISTRY 2005. [DOI: 10.1002/hc.20125] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Ooi T, Takahashi M, Yamada M, Tayama E, Omoto K, Maruoka K. (2,7-Disubstituted-1,8-biphenylenedioxy)bis(dimethylaluminum) as Bidentate Organoaluminum Lewis Acids: Elucidation and Synthetic Utility of the Double Electrophilic Activation Phenomenon. J Am Chem Soc 2004; 126:1150-60. [PMID: 14746484 DOI: 10.1021/ja030552s] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A series of (2,7-disubstituted-1,8-biphenylenedioxy)bis(dimethylaluminum) (2) has been readily prepared in situ by treatment of the requisite 2,7-disubstituted-1,8-biphenylenediol (1) with Me3Al (2 equiv) in CH2Cl2 at room temperature; this primarily relies on the successful establishment of a new synthetic procedure of 1 starting from inexpensive m-anisidine. Evaluation of 2 as a bidentate organoaluminum Lewis acid has been performed by the reduction of ketonic substrates using Bu3SnH as a hydride source in comparison to the conventional monodentate Lewis acid dimethylaluminum 2,6-xylenoxide (11), uncovering the significantly high activation ability of 2 toward carbonyl. Particularly, (2,7-dimethyl-1,8-biphenylenedioxy)bis(dimethylaluminum) (2a) exerted the highest reactivity, which has also been emphasized in the Mukaiyama aldol reaction. The structure of the bidentate Lewis acid 2 was unambiguously determined by single-crystal X-ray diffraction analysis of 2g possessing a bulky 3,5-di-tert-butylphenyl substituent, revealing the rigid dimeric assembly in the solid state. The double electrophilic activation of carbonyl substrate by 2a has been supported by low-temperature 13C NMR analysis as well as theoretical study using the Gaussian 98 program. Moreover, unique stereoselectivity has been observed in the 2a-promoted Mukaiyama Michael addition, and highly chemoselective functionalization of carbonyl compounds in the presence of their acetal counterparts has been realized using 2a. Finally, the effectiveness of 2a for the activation of ether functionality has been demonstrated in the Claisen rearrangement of allyl vinyl ethers.
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Affiliation(s)
- Takashi Ooi
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo, Kyoto 606-8502, Japan
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Zhang K, Prabhavathy J, Yip JHK, Koh LL, Tan GK, Vittal JJ. First examples of Au(I)-X-Ag(I) halonium cations (X = Cl and Br). J Am Chem Soc 2003; 125:8452-3. [PMID: 12848548 DOI: 10.1021/ja035064z] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Novel {[(mu-PAnP)(AuX)2]2Ag}+SbF6- halonium ions (X = Cl, Br; PAnP = 9,10-bis(diphenylphosphino)anthracene) were synthesized from the reactions between (mu-PAnP)(AuX)2 and 1/2 mol equiv of AgSbF6. The compounds feature an unprecedented distorted Au4X4 dodecahedron which encapsulates a silver(I) ion at its center. The halonium ions are stabilized by collective actions of metallophilic Au-Ag, aromatic pi-pi, and Ag-X interactions.
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Affiliation(s)
- Ke Zhang
- Department of Chemistry, The National University of Singapore, 10 Kent Ridge Crescent, 119260, Singapore
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