Genetic control of recombination in the silkworm

Experimental evolution of recombination and crossover interference in Drosophila caused by directional selection for stress-related traits

BACKGROUND

Population genetics predicts that tight linkage between new and/or pre-existing beneficial and deleterious alleles should decrease the efficiency of natural selection in finite populations. By decoupling beneficial and deleterious alleles and facilitating the combination of beneficial alleles, recombination accelerates the formation of high-fitness genotypes. This may impose indirect selection for increased recombination. Despite the progress in theoretical understanding, interplay between recombination and selection remains a controversial issue in evolutionary biology. Even less satisfactory is the situation with crossover interference, which is a deviation of double-crossover frequency in a pair of adjacent intervals from the product of recombination rates in the two intervals expected on the assumption of crossover independence. Here, we report substantial changes in recombination and interference in three long-term directional selection experiments with Drosophila melanogaster: for desiccation (~50 generations), hypoxia, and hyperoxia tolerance (>200 generations each).

RESULTS

For all three experiments, we found a high interval-specific increase of recombination frequencies in selection lines (up to 40-50% per interval) compared to the control lines. We also discovered a profound effect of selection on interference as expressed by an increased frequency of double crossovers in selection lines. Our results show that changes in interference are not necessarily coupled with increased recombination.

CONCLUSIONS

Our results support the theoretical predictions that adaptation to a new environment can promote evolution toward higher recombination. Moreover, this is the first evidence of selection for different recombination-unrelated traits potentially leading, not only to evolution toward increased crossover rates, but also to changes in crossover interference, one of the fundamental features of recombination.

Increased recombination frequencies resulting from directional selection for geotaxis in Drosophila

Several classes of models have been suggested to explain how natural selection can favour non-zero recombination. Directional and fluctuating selection, abiotic and biotic, and selection against harmful mutations seem to be the most plausible factors, but little has been done to test the problem experimentally. Here we show that long-term selection for positive or negative geotaxis in Drosophila melanogaster results in a dramatic increase in recombination rates in different genomic regions. The total increment in recombination for the genome portion considered is 78 cM for geo+ and 66 cM for geo-. Selection for negative geotaxis did not result in recombination changes in chromosome 2 whereas selection in the opposite direction caused nearly a four-fold increase in the b-cn segment and a significant, albeit not as high, increase in the adjacent regions, al-b and cn-vg. In chromosomes X and 3, a significant increase in recombination was found in both selected lines. In total, the increment in exchange frequency in chromosome X (y-cv-ct-v-car) was from 72.6 per cent (the control level) to 124.7 and 110.3 per cent geo- and geo+, respectively, whereas for the studied portion of chromosome 3 (ru-h-cu-sr-e) we obtained, correspondingly, 60.8, 76.4 and 73.8 per cent. Thus, in general, selection for geotaxis resulted in increased recombination frequencies regardless of the direction of selection.(ABSTRACT TRUNCATED AT 250 WORDS)