1
|
Izadi F, Luxford TFM, Sedmidubská B, Arthur-Baidoo E, Kočišek J, Ončák M, Denifl S. Dissociative Electron Attachment Dynamics of a Promising Cancer Drug Indicates Its Radiosensitizing Potential. Angew Chem Int Ed Engl 2024; 63:e202407469. [PMID: 38980970 DOI: 10.1002/anie.202407469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 06/13/2024] [Accepted: 06/28/2024] [Indexed: 07/11/2024]
Abstract
2-Bromo-1-(3,3-dinitroazetidin-1-yl)ethan-1-one (RRx-001) is a hypoxic cell chemotherapeutics with already demonstrated synergism in combined chemo-radiation therapy. The interaction of the compound with secondary low-energy electrons formed in large amounts during the physico-chemical phase of the irradiation may lead to these synergistic effects. The present study focuses on the first step of RRx-001 interaction with low-energy electrons in which a transient anion is formed and fragmented. Combination of two experiments allows us to disentangle the decay of the RRx-001 anion on different timescales. Sole presence of the electron initiates rapid dissociation of NO2 and HNO2 neutrals while NO2 - and Br- anions are produced both directly and via intermediate complexes. Based on our quantum chemical calculations, we propose that bidirectional state switching between π*(NO2) and σ*(C-Br) states explains the experimental spectra. The fast dynamics monitored will impact the condensed phase chemistry of the anion as well.
Collapse
Affiliation(s)
- Farhad Izadi
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
- Center for Biomolecular Sciences Innsbruck, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
| | - Thomas F M Luxford
- J. Heyrovský Institute of Physical Chemistry of the Czech Academy of Sciences, v.v.i., Dolejškova 3, 18223, Prague, Czech Republic
| | - Barbora Sedmidubská
- J. Heyrovský Institute of Physical Chemistry of the Czech Academy of Sciences, v.v.i., Dolejškova 3, 18223, Prague, Czech Republic
- Department of Nuclear Chemistry, Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 78/7, 115 19, Prague, Czech Republic
| | - Eugene Arthur-Baidoo
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
- Center for Biomolecular Sciences Innsbruck, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
| | - Jaroslav Kočišek
- J. Heyrovský Institute of Physical Chemistry of the Czech Academy of Sciences, v.v.i., Dolejškova 3, 18223, Prague, Czech Republic
| | - Milan Ončák
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
| | - Stephan Denifl
- Institut für Ionenphysik und Angewandte Physik, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
- Center for Biomolecular Sciences Innsbruck, Universität Innsbruck, Technikerstrasse 25, A-6020, Innsbruck, Austria
| |
Collapse
|
2
|
Clarke CJ, Burrow EM, Verlet JRR. The valence electron affinity of uracil determined by anion cluster photoelectron spectroscopy. Phys Chem Chem Phys 2024; 26:20037-20045. [PMID: 39007196 DOI: 10.1039/d4cp02146k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/16/2024]
Abstract
The unoccupied π* orbitals of the nucleobases are considered to play important roles in low-energy electron attachment to DNA, inducing damage. While the lowest anionic valence state is vertically unbound in all neutral nucleobases, it remains unclear even for the simplest nucleobase, uracil (U), whether its valence anion (U-) is adiabatically bound, which has important implications on the efficacy of damage processes. Using anion photoelectron spectroscopy, we demonstrate that the valence electron affinity (EAV) of U can be accurately measured within weakly solvating clusters, U-(Ar)n and U-(N2)n. Through extrapolation to the isolated U limit, we show that EAV = -2 ± 18 meV. We discuss these findings in the context of electron attachment to U and its reorganization energy, and more generally establish guidance for the determination of molecular electron affinities from the photoelectron spectroscopy of anion clusters.
Collapse
Affiliation(s)
- Connor J Clarke
- Department of Chemistry, Durham University, Durham DH1 3LE, UK.
| | - E Michi Burrow
- Department of Chemistry, Durham University, Durham DH1 3LE, UK.
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, UK.
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 3, 18223 Prague 8, Czech Republic
| |
Collapse
|
3
|
McGinnis KR, McGee CJ, Sommerfeld T, Jarrold CC. Anion Photoelectron Imaging Spectroscopy of C 6F 5X - (X = F, Cl, Br, I). J Phys Chem A 2024; 128:5646-5658. [PMID: 38980699 DOI: 10.1021/acs.jpca.4c03434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
Abstract
The photoelectron (PE) spectra of C6F5X- (X = Cl, Br, I) and computational results on the anions and neutrals are presented and compared to previously reported results on C6F6- [McGee, C. J. J. Phys. Chem. A 2023, 127, 8556-8565.]. The spectra all exhibit broad, vibrationally unresolved detachment transitions, indicating that the equilibrium structures of the anions are significantly different from the neutrals. The PE spectrum of C6F5Cl- exhibits a parallel photoelectron angular distribution (PAD), similar to that of the previously reported C6F6- spectrum, while the PE spectra of C6F5Br- and C6F5I- have isotropic PADs, and also exhibit a prominent X- PE feature due to photodissociation of C6F5X- resulting in X- formation. Identification of the C6F5X- detachment transition origins, which is equivalent to the neutral electron affinity (EA), in all three cases is difficult, since the broadness of the detachment feature is accompanied by vanishingly small detachment cross section near the origin. Upper limits on the EAs were determined to be 1.70 eV for C6F5Cl, 2.10 eV for C6F5Br, and 2.00 eV for C6F5I, all significantly higher than the 0.76 eV upper limit determined for C6F6 with the same experiment. The broad detachment transitions are consistent with computational results, which predict very large differences between the neutral and anionic C-X (X = Cl, Br, I) bond lengths. Based on differences between the MBIS atom charges in the anions and neutrals, the excess charge in the anion is on the unique C atom and X, in contrast to the nonplanar C2v structured C6F6- anion, for which the charge is delocalized over the molecule. In C6F5Cl-, the C-Cl bond is predicted to be bent out of the plane, while both C6F5Br- and C6F5I- are predicted to be planar on average. The impact of the interruption of the symmetry in the hexafluorobenzene neutral and anion on the molecular and electronic structure of C6F5X/C6F5X- is considered, as well as the possible dissociative state leading to X- (X = Br, I) formation, and the nature of the C-X bond.
Collapse
Affiliation(s)
- Kristen Rose McGinnis
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Conor J McGee
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Thomas Sommerfeld
- Department of Chemistry and Physics, Southeast Louisiana University, SLU 10878, Hammond, Louisiana 70402, United States
| | - Caroline Chick Jarrold
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| |
Collapse
|
4
|
Mulvey D, Jordan KD. Demonstrating the Connection between the Nonvalence Correlation-Bound Anions of Polyaromatic Hydrocarbons and the Image Potential States of Graphene Using a One-Electron Model Hamiltonian. J Phys Chem Lett 2024; 15:6299-6305. [PMID: 38856081 PMCID: PMC11194819 DOI: 10.1021/acs.jpclett.4c01308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2024] [Revised: 05/29/2024] [Accepted: 06/04/2024] [Indexed: 06/11/2024]
Abstract
The ground and excited state nonvalence correlation-bound (NVCB) anion states of the C 6 n 2 H 6 n hexagonal polycylic aromatic hydrocarbons and of hexagonal C 6 n 2 graphene nanoflakes are characterized using a one-electron model Hamiltonian which incorporates atomic electrostatic moments up to the quadrupole, coupled inducible charges and dipoles, and atom-centered Gaussians to describe the short-range repulsive interactions. Extrapolation of the calculated electron binding energies of the lowest energy symmetric and antisymmetric (with respect to the molecular plane) NVCB anions of both the polycylic aromatic hydrocarbons and the carbon nanoflakes to the n → ∞ limit yields binding energies that are in good agreement with those of the most stable symmetric and antisymmetric image potential states of freestanding graphene as determined from two-photon photoemission spectroscopy (2PPE) experiments.
Collapse
Affiliation(s)
- Devin
M. Mulvey
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Kenneth D. Jordan
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| |
Collapse
|
5
|
Clarke CJ, Verlet JRR. Dynamics of Anions: From Bound to Unbound States and Everything In Between. Annu Rev Phys Chem 2024; 75:89-110. [PMID: 38277700 DOI: 10.1146/annurev-physchem-090722-125031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2024]
Abstract
Gas-phase anions present an ideal playground for the exploration of excited-state dynamics. They offer control in terms of the mass, extent of solvation, internal temperature, and conformation. The application of a range of ion sources has opened the field to a vast array of anionic systems whose dynamics are important in areas ranging from biology to star formation. Here, we review recent experimental developments in the field of anion photodynamics, demonstrating the detailed insight into photodynamical and electron-capture processes that can be uncovered. We consider the electronic and nuclear ultrafast dynamics of electronically bound excited states along entire reaction coordinates; electronically unbound states showing that photochemical concepts, such as chromophores and Kasha's rule, are transferable to electron-driven chemistry; and nonvalence states that straddle the interface between bound and unbound states. Finally, we consider likely developments that are sure to keep the field of anion dynamics buoyant and impactful.
Collapse
Affiliation(s)
- Connor J Clarke
- Department of Chemistry, Durham University, Durham, United Kingdom;
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham, United Kingdom;
| |
Collapse
|
6
|
Zhang R, Yan S, Song H, Guo H, Ning C. Probing the activated complex of the F + NH 3 reaction via a dipole-bound state. Nat Commun 2024; 15:3858. [PMID: 38719855 PMCID: PMC11079065 DOI: 10.1038/s41467-024-48202-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Accepted: 04/23/2024] [Indexed: 05/12/2024] Open
Abstract
Experimental characterization of the transition state poses a significant challenge due to its fleeting nature. Negative ion photodetachment offers a unique tool for probing transition states and their vicinity. However, this approach is usually limited to Franck-Condon regions. For example, high-lying Feshbach resonances with an excited HF stretching mode (vHF = 2-4) were recently identified in the transition-state region of the F + NH3 → HF + NH2 reaction through photo-detaching FNH3- anions, but the direct photodetachment failed to observe the lower-lying vHF = 0,1 resonances and bound states due apparently to negligible Franck-Condon factors. Indeed, these weak transitions can be resonantly enhanced via a dipole-bound state (DBS) formed between an electron and the polar FNH3 species. In this study, we unveil a series of Feshbach resonances and bound states along the F + NH3 reaction path via a DBS by combining high-resolution photoelectron spectroscopy with high-level quantum dynamical computations. This study presents an approach for probing the activated complex in a reaction by negative ion photodetachment through a DBS.
Collapse
Affiliation(s)
- Rui Zhang
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Frontier Science Center for Quantum Information, Tsinghua University, 100084, Beijing, China
| | - Shuaiting Yan
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Frontier Science Center for Quantum Information, Tsinghua University, 100084, Beijing, China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance Spectroscopy and Imaging, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China.
| | - Hua Guo
- Department of Chemistry and Chemical Biology, Center for Computational Chemistry, University of New Mexico, Albuquerque, NM, 87131, USA
| | - Chuangang Ning
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Frontier Science Center for Quantum Information, Tsinghua University, 100084, Beijing, China.
| |
Collapse
|
7
|
Angelaki M, Carreira Mendes Da Silva Y, Perrier S, George C. Quantification and Mechanistic Investigation of the Spontaneous H 2O 2 Generation at the Interfaces of Salt-Containing Aqueous Droplets. J Am Chem Soc 2024; 146:8327-8334. [PMID: 38488457 PMCID: PMC10979748 DOI: 10.1021/jacs.3c14040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2024]
Abstract
There is now much evidence that OH radicals and H2O2 are spontaneously generated at the air-water interface of atmospheric aerosols. Here, we investigated the effect of halide anions (Cl-, Br-, I-), which are abundant in marine aerosols, on this H2O2 production. Droplets were generated via nebulization of water solutions containing Na2SO4, NaCl, NaBr, and NaI containing solutions, and H2O2 was monitored as a function of the salt concentration under atmospheric relevant conditions. The interfacial OH radical formation was also investigated by adding terephthalic acid (TA) to our salt solutions, and the product of its reaction with OH, hydroxy terephthalic acid (TAOH), was monitored. Finally, a mechanistic investigation was performed to examine the reactions participating in H2O2 production, and their respective contributions were quantified. Our results showed that only Br- contributes to the interfacial H2O2 formation, promoting the production by acting as an electron donor, while Na2SO4 and NaCl stabilized the droplets by only reducing their evaporation. TAOH was observed in the collected droplets and, for the first time, directly in the particle phase by means of online fluorescence spectroscopy, confirming the interfacial OH production. A mechanistic study suggests that H2O2 is formed by both OH and HO2 self-recombination, as well as HO2 reaction with H atoms. This work is expected to enhance our understanding of interfacial processes and assess their impact on climate, air quality, and health.
Collapse
Affiliation(s)
- Maria Angelaki
- Université Claude Bernard Lyon 1, CNRS, IRCELYON, UMR 5256, F-69626, Villeurbanne, France
| | | | - Sébastien Perrier
- Université Claude Bernard Lyon 1, CNRS, IRCELYON, UMR 5256, F-69626, Villeurbanne, France
| | - Christian George
- Université Claude Bernard Lyon 1, CNRS, IRCELYON, UMR 5256, F-69626, Villeurbanne, France
| |
Collapse
|
8
|
Moorby RE, Parravicini V, Alessio M, Jagau TC. Signatures of s-wave scattering in bound electronic states. Phys Chem Chem Phys 2024; 26:6532-6539. [PMID: 38323476 DOI: 10.1039/d4cp00181h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2024]
Abstract
We compute EOM-EA-CCSD and EOM-EA-CCSDT potential energy curves and one-electron properties of several anions at bond lengths close to where these states become unbound. We compare the anions of HCl and pyrrole, which are associated with s-wave scattering, with N2 and H2, which correspond to resonances. For HCl and pyrrole, we observe, on inclusion of diffuse basis functions, a pronounced bending effect in the anionic potential energy curves near the crossing points with their corresponding neutral molecules. Additionally, we observe that the Dyson orbital and second moment of the electron density become extremely large in this region; for HCl, the size of the latter becomes 5 orders of magnitude larger over a range of 5 pm. This behaviour is not observed in H2 or N2. Our work thus shows that bound state electronic-structure methods can distinguish between anions that turn into electronic resonances and those associated with s-wave scattering states.
Collapse
Affiliation(s)
- Robin E Moorby
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
- Department of Chemistry, University of Durham, South Road, Durham, DH1 3LE, UK
| | | | - Maristella Alessio
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
| | - Thomas-C Jagau
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium.
| |
Collapse
|
9
|
An S, Kim D, Kim J, Kim SK. Excited-state chemistry of the nitromethane anion mediated by the dipole-bound states revealed by photofragment action spectroscopy. Chem Sci 2023; 14:12231-12237. [PMID: 37969601 PMCID: PMC10631229 DOI: 10.1039/d3sc04342h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Accepted: 10/12/2023] [Indexed: 11/17/2023] Open
Abstract
We report the first experimental observation of the excited dipole-bound state (DBS) of the cryogenically cooled nitromethane anion (CH3NO2-), where the excess electron is loosely attached to the singlet or triplet neutral-core. Photofragment and photodetachment action spectra have been employed for the dynamic exploration of Feshbach resonances located even far above the electron detachment threshold, giving excitation profiles from the ground anionic state (D0) to the DBSs which match quite well with the spectral structures of the photoelectron spectra. This indicates that the electron transfer from the nonvalence orbital (of DBS) to the valence orbital (of anion) is mainly responsible for the anionic fragmentation channels, giving strong evidence for that the DBS plays a dynamic doorway-role in the anionic fragmentation reactions. Photofragment action spectra have also been obtained for the anionic clusters of (CH3NO2)2-, (CH3NO2)3-, or (CH3NO2·H2O)-, giving the relative yields of various fragments as a function of the excitation energy for each cluster. The absorption profiles of the anionic clusters exhibit substantial blue-shifts compared to the bare nitromethane anion as their ground states are much stabilized by solvation. The anionic fragmentation pattern varies among different clusters, giving essential clues for the thorough understanding of the whole anionic dynamics such as the dynamic role of the short-lived nonvalence-bound states of the clusters.
Collapse
Affiliation(s)
- Sejun An
- Department of Chemistry, KAIST Daejeon 34141 Republic of Korea
| | - Dabin Kim
- Department of Chemistry, KAIST Daejeon 34141 Republic of Korea
| | - Junggil Kim
- Department of Chemistry, KAIST Daejeon 34141 Republic of Korea
| | - Sang Kyu Kim
- Department of Chemistry, KAIST Daejeon 34141 Republic of Korea
| |
Collapse
|
10
|
McGee CJ, McGinnis KR, Jarrold CC. Anion Photoelectron Imaging Spectroscopy of C 6HF 5-, C 6F 6-, and the Absence of C 6H 2F 4. J Phys Chem A 2023; 127:8556-8565. [PMID: 37816145 DOI: 10.1021/acs.jpca.3c04016] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/12/2023]
Abstract
Substituents have a profound effect on the electronic structure of the benzene molecule. In this paper, we present new photoelectron spectra of the C5HF5- molecular anion, to test predictions [ Int. J. Quant. Chem. 2017, 188, e25504] that pentafluorobenzene has a positive electron affinity, as hexafluorobenzene was already known to have. The PE spectrum of C6HF5- exhibits a broad and vibrationally unresolved band due to significant differences between the structure of the anion and the neutral. The vertical detachment energy (VDE) of C5HF5- is determined to be 1.33 ± 0.05 eV, and the lowest binding energy at which the signal is observed is 0.53 ± 0.05 eV, which, if taken as the electron affinity, is in good agreement with the computed value. In addition, we attempted to generate intact C6H2F4- molecular ions using the 1,2,3,4-tetrafluorobenzene, 1,2,3,5-tetrafluorobenzene, and 1,2,4,5-tetrafluorobenzene precursors, as tetrafluorobenzene was predicted to have a near-zero but marginally positive electron affinity. Using a photoemission anion source, we were not able to produce the intact tetrafluorobenzene anion. Density functional theory calculations support a more detailed discussion of the impact of fluorine substitution on the electronic structure of these species.
Collapse
Affiliation(s)
- Conor J McGee
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Kristen Rose McGinnis
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Caroline Chick Jarrold
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| |
Collapse
|
11
|
Wang X, Hasan M, Fan L, Wang Y, Li H, Slaughter DS, Centurion M. Mass-selected ion-molecule cluster beam apparatus for ultrafast photofragmentation studies. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2023; 94:095111. [PMID: 37724931 DOI: 10.1063/5.0148194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 08/31/2023] [Indexed: 09/21/2023]
Abstract
We describe an apparatus for investigating the excited-state dissociation dynamics of mass-selected ion-molecule clusters by mass-resolving and detecting photofragment-ions and neutrals, in coincidence, using an ultrafast laser operating at high repetition rates. The apparatus comprises a source that generates ion-molecule clusters, a time-of-flight spectrometer, and a mass filter that selects the desired anions, and a linear-plus-quadratic reflectron mass spectrometer that discriminates the fragment anions after the femtosecond laser excites the clusters. The fragment neutrals and anions are then captured by two channeltron detectors. The apparatus performance is tested by measuring the photofragments: I-, CF3I-, and neutrals from photoexcitation of the ion-molecule cluster CF3I·I- using femtosecond UV laser pulses with a wavelength of 266 nm. The experimental results are compared with our ground state and excited state electronic structure calculations as well as the existing results and calculations, with particular attention to the generation mechanism of the anion fragments and dissociation channels of the ion-molecule cluster CF3I·I- in the charge-transfer excited state.
Collapse
Affiliation(s)
- Xiaojun Wang
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Mahmudul Hasan
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Lin Fan
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Yibo Wang
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Hui Li
- Department of Chemistry, Nebraska Center for Materials and Nanoscience, and Center for Integrated Biomolecular Communication, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Daniel S Slaughter
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd., Berkeley, California 94720, USA
| | - Martin Centurion
- Department of Physics and Astronomy, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| |
Collapse
|
12
|
Abstract
This Perspective attempts to shed light on developments in the theoretical and experimental study of molecular anions highlighting more recent workers in the field. The species I discuss include (i) valence-bound (singly and multiply charged) anions including atmospheric, catalytic, superhalogen, interfacial, and more; (ii) dipole- and correlation-bound anions including their role as doorways to other states and their appearance "in space", and (iii) metastable anions focusing on tools needed for their theoretical treatment. I also briefly discuss angular distributions of photodetached electrons and their growing utilization in experiments and theory. A recurring theme is the dependence of electron binding energies (EBEs) on the surrounding environment. Some anions that are nonexistent as isolated species evolve to be stable but with small EBEs when weakly solvated (e.g., as in a cluster or at an air-solvent interface). Others existing in isolation only as metastable species become stable when the underlying molecular framework contains one or more positively charged group (e.g., protonated side chains in a peptide) that generates a stabilizing Coulomb potential. On the other hand, a destabilizing Coulomb potential between/among negative sites in a multiply charged anion decreases the EBEs of each such site and generates a repulsive Coulomb barrier that can affect stability.
Collapse
Affiliation(s)
- Jack Simons
- Henry Eyring Center for Theoretical Chemistry, Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| |
Collapse
|
13
|
Abstract
Weakly bound non-valence anions are molecular systems where the excess electron stabilizes in a very diffuse orbital whose size, shape, and binding energy (∼1-100 meV) are governed by the long-range electrostatic potential of the molecule. Its binding energy comes mainly from charge-dipole or charge-multipole interactions or dispersion forces. While highly correlated methods, like coupled cluster methods, are considered to be the state of the art for describing anionic systems, especially when the electron lies in a very diffuse orbital, we consider here the possibility to use DFT-based calculations. In such molecular anions, the outer electron experiences long-range exchange and correlation interactions. We show that DFT can describe long-range bound states provided that a correct asymptotic exchange and correlation potential is used, namely, that from a range-separated hybrid functional. This opens an alternative to the computationally demanding highly correlated method calculations. It is also suggested that the study of weakly bound anions could help in the construction of new DFT potentials to study systems where nonlocal effects are significant.
Collapse
Affiliation(s)
- Guillaume Thiam
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, UMR5306, F-69622 Villeurbanne, France
| | - Franck Rabilloud
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, UMR5306, F-69622 Villeurbanne, France
| |
Collapse
|
14
|
Ouyang L, Lin H, Zhuang P, Shao Y, Khosravifarsani M, Guérin B, Zheng Y, Sanche L. DNA radiosensitization by terpyridine-platinum: damage induced by 5 and 10 eV transient anions. NANOSCALE 2023; 15:3230-3242. [PMID: 36722902 DOI: 10.1039/d2nr05403e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Chemoradiation therapy (CRT), which combines a chemotherapeutic drug with ionizing radiation (IR), is the most common cancer treatment. At the molecular level, the binding of Pt-drugs to DNA sensitizes cancer cells to IR, mostly by increasing the damage induced by secondary low-energy (0-20 eV) electrons (LEEs). We investigate such enhancements by binding terpyridine-platinum (Tpy-Pt) to supercoiled plasmid DNA. Fifteen nanometer thick films of Tpy-Pt-DNA complexes in a molar ratio of 5 : 1 were irradiated with monoenergetic electrons of 5 and 10 eV, which principally attach to the DNA bases to form transient anions (TAs) decaying into a multitude of bond-breaking channels. At both energies, the effective yields of crosslinks (CLs), base damage (BD) related CLs, single and double strand breaks (SSBs and DSBs), non-DSB-cluster lesions, loss of supercoiled configuration and base lesions are 6.5 ± 1.5, 8.8± 3.0, 88 ± 11, 5.3 ± 1.3, 9.6 ± 2.2, 106 ± 17, 189 ± 31 × 10-15 per electron per molecule, and 11.9 ± 2.6, 19.9 ± 4.4, 128 ± 18, 7.7 ± 3.0, 13.4 ± 3.9, 144 ± 19, 229 ± 42 × 10-15 per electron per molecule, respectively. DNA damage increased 1.2-4.2-fold due to Tpy-Pt, the highest being for BD-related CLs. These enhancements are slightly higher than those obtained by the conventional Pt-drugs cisplatin, carboplatin and oxaliplatin, apart from BD-related CLs, which are about 3 times higher. Enhancements are related to the strong perturbation of the DNA helix by Tpy-Pt, its high dipole moment and its favorable binding to guanine (G), all of which increase bond-breaking via TA formation. In CRT, Tpy-Pt could considerably enhance crosslinking within genomic DNA and between DNA and other components of the nucleus, causing roadblocks to replication and transcription, particularly within telomeres, where it binds preferentially within G-quadruplexes.
Collapse
Affiliation(s)
- Liangde Ouyang
- State Key Laboratory of Photocatalysis on Energy and Environment, Faculty of Chemistry, Fuzhou University, Fuzhou 350116, P.R. China
| | - Hong Lin
- State Key Laboratory of Photocatalysis on Energy and Environment, Faculty of Chemistry, Fuzhou University, Fuzhou 350116, P.R. China
| | - Puxiang Zhuang
- State Key Laboratory of Photocatalysis on Energy and Environment, Faculty of Chemistry, Fuzhou University, Fuzhou 350116, P.R. China
| | - Yu Shao
- State Key Laboratory of Photocatalysis on Energy and Environment, Faculty of Chemistry, Fuzhou University, Fuzhou 350116, P.R. China
| | - Meysam Khosravifarsani
- Department of Nuclear Medicine and Radiobiology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC, Canada J1H 5N4.
| | - Brigitte Guérin
- Department of Nuclear Medicine and Radiobiology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC, Canada J1H 5N4.
| | - Yi Zheng
- State Key Laboratory of Photocatalysis on Energy and Environment, Faculty of Chemistry, Fuzhou University, Fuzhou 350116, P.R. China
- Department of Nuclear Medicine and Radiobiology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC, Canada J1H 5N4.
| | - Léon Sanche
- Department of Nuclear Medicine and Radiobiology, Faculty of Medicine and Health Sciences, Université de Sherbrooke, Sherbrooke, QC, Canada J1H 5N4.
| |
Collapse
|
15
|
Cooper G, Clarke CJ, Verlet JRR. Low-Energy Shape Resonances of a Nucleobase in Water. J Am Chem Soc 2022; 145:1319-1326. [PMID: 36584340 PMCID: PMC9853861 DOI: 10.1021/jacs.2c11440] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
When high-energy radiation passes through aqueous material, low-energy electrons are produced which cause DNA damage. Electronic states of anionic nucleobases have been suggested as an entrance channel to capture the electron. However, identifying these electronic resonances have been restricted to gas-phase electron-nucleobase studies and offer limited insight into the resonances available within the aqueous environment of DNA. Here, resonance and detachment energies of the micro-hydrated uracil pyrimidine nucleobase anion are determined by two-dimensional photoelectron spectroscopy and are shown to extrapolate linearly with cluster size. This extrapolation allows the corresponding resonance and detachment energies to be determined for uracil in aqueous solution as well as the reorganization energy associated with electron capture. Two shape resonances are clearly identified that can capture low-energy electrons and subsequently form the radical anion by solvent stabilization and internal conversion to the ground electronic state. The resonances and their dynamics probed here are the nucleobase-centered doorway states for low-energy electron capture and damage in DNA.
Collapse
|
16
|
Kang DH, Kim J, Eun HJ, Kim SK. State-Specific Chemical Dynamics of the Nonvalence Bound State of the Molecular Anions. Acc Chem Res 2022; 55:3032-3042. [PMID: 36206486 DOI: 10.1021/acs.accounts.2c00512] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Nonvalence bound states (NBS) are anionic states where the excess electron is extremely loosely bound to the neutral core through long-range potentials. In contrast to the valence orbitals of which the electron occupancy determines the molecular structure, as well as the chemical reactivity, the nonvalence orbital is quite diffuse and located far from the neutral core. The NBS can be classified into the dipole-bound state (DBS), quadruple-bound state (QBS), or correlation-bound state (CBS) according to the nature of the electron-neutral interaction, although their interaction potentials may cooperatively contribute. The NBS is ubiquitous in nature and has the strong implications in atmospheric, interstellar, or biological chemistry. Accordingly, NBS has long been conceived to play the role of the doorway into the formation of a stable anion or dissociative electron attachment (DEA). Despite intensive and extensive studies, however, the quantum-mechanical nature of NBS is still far from being thorough understanding. Herein, we describe a new aspect of state-specific NBS-mediated chemical dynamics, which has been revealed through a series of recent studies by our group. We have employed picosecond time-resolved pump-probe spectroscopy combined with cryogenically cooled ion trap and velocity-map imaging techniques to study closed-shell anions generated by electrospray ionization. DBS vibrational Feshbach resonances are prepared by the optical excitation of phenoxide, for instance, and their individual lifetimes have been precisely measured in a state-specific manner to reveal the strong mode-dependency of the autodetachment rate. Fermi's golden rule turns out to be extremely useful for a rational explanation of the experiment, although the more sophisticated theoretical model is desirable for the more quantitative analysis. For the DBS of para-chlorophenoxide or para-bromophenoxide where the polarizability of neutral core is substantial, the Fermi's golden rule based on the charge-dipole potential needs to be significantly modified to include the correlation effects to explain the exceptionally slow autodetachment rates. For the QBS of 4-cyanophenoxide, the mode-specific behavior of the quadrupole ellipsoid tensor explains the strong mode-dependent autodetachment rate. Meanwhile, the nonadiabatic transition of the excess electron into the valence orbital can result in stable anion formation or immediate chemical bond rupture. In the DBS of ortho-, meta-, or para-iodophenoxide, the transformation of the loosely bound excess electron into the πσ* antibonding orbital occurs to give I- as a final fragment. The fragmentation mediated by DBS occurs competitively with the concomitant autodetachment, paving a new way of the reaction control by tuning the quantum-mechanical nature of the DBS Feshbach resonance. This experimental observation provides the foremost evidence for the dynamic role of the DBS as a doorway into anion chemistry, such as DEA. The ponderomotive force on the electron in the nonvalence orbital has been demonstrated for the first time in a strong optical field, giving great promise for the manipulation of polyatomic molecules in terms of the spatial location, as well as the AC-Stark control of the chemical reaction.
Collapse
Affiliation(s)
- Do Hyung Kang
- Department of Chemistry, KAIST, Daejeon34141, Republic of Korea
| | - Jinwoo Kim
- Department of Chemistry, KAIST, Daejeon34141, Republic of Korea
| | - Han Jun Eun
- Department of Chemistry, KAIST, Daejeon34141, Republic of Korea
| | - Sang Kyu Kim
- Department of Chemistry, KAIST, Daejeon34141, Republic of Korea
| |
Collapse
|
17
|
Lu Y, Tang R, Zhang R, Ning C. Probing Isomerization Dynamics via a Dipole-Bound State. J Phys Chem Lett 2022; 13:8711-8716. [PMID: 36094393 DOI: 10.1021/acs.jpclett.2c02348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
The observation of molecular isomerization dynamics is a long-standing goal in physical chemistry. The loosely bound electron in a dipole-bound state (DBS) can be a messenger for probing the isomerization of the neutral core. Here we study the isomerization dynamics of the salt dimer (NaCl)2 from linear to rhombic via a DBS using cryogenic photoelectron spectroscopy in combination with ab initio calculations. Although the energy level of the DBS is below the electron affinity of the linear (NaCl)2, (NaCl)2- in its DBS can autodetach due to the linear-to-rhombic isomerization. (NaCl)2- in the ground DBS has a relatively long lifetime of a few nanoseconds due to the quantum tunneling through a potential barrier during the transformation from linear to rhombic. In contrast, the vibrationally excited DBS has a much shorter lifetime on the order of picoseconds. The energy distribution of autodetachment electrons has an unexpected characteristic of the thermionic emission.
Collapse
Affiliation(s)
- Yuzhu Lu
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Tsinghua University, Beijing, 100084, China
| | - Rulin Tang
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Tsinghua University, Beijing, 100084, China
| | - Rui Zhang
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Tsinghua University, Beijing, 100084, China
| | - Chuangang Ning
- Department of Physics, State Key Laboratory of Low Dimensional Quantum Physics, Tsinghua University, Beijing, 100084, China
| |
Collapse
|
18
|
Anstöter CS, Verlet JRR. A Hückel Model for the Excited-State Dynamics of a Protein Chromophore Developed Using Photoelectron Imaging. Acc Chem Res 2022; 55:1205-1213. [PMID: 35172580 PMCID: PMC9084545 DOI: 10.1021/acs.accounts.1c00780] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Chemistry can be described as the movement of nuclei within molecules and the concomitant instantaneous change in electronic structure. This idea underpins the central chemical concepts of potential energy surfaces and reaction coordinates. To experimentally capture such chemical change therefore requires methods that can probe both the nuclear and electronic structure simultaneously and on the time scale of atomic motion. In this Account, we show how time-resolved photoelectron imaging can do exactly this and how it can be used to build a detailed and intuitive understanding of the electronic structure and excited-state dynamics of chromophores. The chromophore of the photoactive yellow protein (PYP) is used as a case study. This chromophore contains a para-substituted phenolate anion, where the substituent, R, can be viewed as an acrolein derivative. It is shown that the measured photoelectron angular distribution can be directly related to the electronic structure of the para-substituted phenolate anion. By incrementally considering differing R groups, it is also shown that these photoelectron angular distributions are exquisitely sensitive to the conformational flexibility of R and that when R contains a π-system the excited states of the chromophore can be viewed as a linear combination of the π* molecular orbitals on the phenolate (πPh*) and the R substituent (πR*). Such Hückel treatment shows that the S1 state of the PYP chromophore has predominantly πR* character and that it is essentially the same as the chromophore of the green fluorescent protein (GFP). The S1 excited-state dynamics of the PYP chromophore probed by time-resolved photoelectron imaging clearly reveals both structural (nuclear) dynamics through the energy spectrum and electronic dynamics through the photoelectron angular distributions. Both motions can be accurately assigned using quantum chemical calculations, and these are consistent with the intuitive Hückel treatment presented. The photoactive protein chromophores considered here are examples of where a chemists' intuitive Hückel view for ground-state chemistry appears to be transferable to the prediction of photochemical excited-state reactivity. While elegant and insightful, such models have limitations, including nonadiabatic dynamics, which is present in a related PYP chromophore, where a fraction of the S1 state population forms a nonvalence (dipole-bound) state of the anion.
Collapse
Affiliation(s)
- Cate S. Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Jan R. R. Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| |
Collapse
|
19
|
Bull JN, Anstöter CS, Stockett MH, Clarke CJ, Gibbard JA, Bieske EJ, Verlet JRR. Nonadiabatic Dynamics between Valence, Nonvalence, and Continuum Electronic States in a Heteropolycyclic Aromatic Hydrocarbon. J Phys Chem Lett 2021; 12:11811-11816. [PMID: 34870432 DOI: 10.1021/acs.jpclett.1c03532] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Internal conversion between valence-localized and dipole-bound states is thought to be a ubiquitous process in polar molecular anions, yet there is limited direct evidence. Here, photodetachment action spectroscopy and time-resolved photoelectron imaging with a heteropolycyclic aromatic hydrocarbon (hetero-PAH) anion, deprotonated 1-pyrenol, is used to demonstrate a subpicosecond (τ1 = 160 ± 20 fs) valence to dipole-bound state internal conversion following excitation of the origin transition of the first valence-localized excited state. The internal conversion dynamics are evident in the photoelectron spectra and in the photoelectron angular distributions (β2 values) as the electronic character of the excited state population changes from valence to nonvalence. The dipole-bound state subsequently decays through mode-specific vibrational autodetachment with a lifetime τ2 = 11 ± 2 ps. These internal conversion and autodetachment dynamics are likely common in molecular anions but difficult to fingerprint due to the transient existence of the dipole-bound state. Potential implications of the present excited state dynamics for interstellar hetero-PAH anion formation are discussed.
Collapse
Affiliation(s)
- James N Bull
- School of Chemistry, Norwich Research Park, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Cate S Anstöter
- Department of Chemistry, Temple University, 1901 N 13th Street, Philadelphia, Pennsylvania 19122, United States
| | - Mark H Stockett
- Department of Physics, Stockholm University, Stockholm SE-106 91, Sweden
| | - Connor J Clarke
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Jemma A Gibbard
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Evan J Bieske
- School of Chemistry, University of Melbourne, Melbourne, VIC 3010, Australia
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| |
Collapse
|
20
|
Kang DH, Kim J, Noh HR, Kim SK. Observation of the ponderomotive effect in non-valence bound states of polyatomic molecular anions. Nat Commun 2021; 12:7098. [PMID: 34876596 PMCID: PMC8651741 DOI: 10.1038/s41467-021-27468-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 11/22/2021] [Indexed: 12/03/2022] Open
Abstract
The ponderomotive force on molecular systems has rarely been observed hitherto, despite potentially being extremely useful for the manipulation of the molecular properties. Here, the ponderomotive effect in the non-valence bound states has been experimentally demonstrated, for the first time to the best of our knowledge, giving great promise for the manipulation of polyatomic molecules by the dynamic Stark effect. Entire quantum levels of the dipole-bound state (DBS) and quadrupole-bound state (QBS) of the phenoxide (or 4-bromophenoxide) and 4-cyanophenoxide anions, respectively, show clear-cut ponderomotive blue-shifts in the presence of the spatiotemporally overlapped non-resonant picosecond control laser pulse. The quasi-free electron in the QBS is found to be more vulnerable to the external oscillating electromagnetic field compared to that in the DBS, suggesting that the non-valence orbital of the former is more diffusive and thus more polarizable compared to that of the latter.
Collapse
Affiliation(s)
- Do Hyung Kang
- grid.37172.300000 0001 2292 0500Department of Chemistry, KAIST, Daejeon, 34141 Republic of Korea
| | - Jinwoo Kim
- grid.37172.300000 0001 2292 0500Department of Chemistry, KAIST, Daejeon, 34141 Republic of Korea
| | - Heung-Ryoul Noh
- grid.14005.300000 0001 0356 9399Department of Physics, Chonnam National University, Gwangju, 61186 Republic of Korea
| | - Sang Kyu Kim
- Department of Chemistry, KAIST, Daejeon, 34141, Republic of Korea.
| |
Collapse
|
21
|
Cao W, Zhang H, Yuan Q, Zhou X, Kass SR, Wang XB. Observation and Exploitation of Spin-Orbit Excited Dipole-Bound States in Ion-Molecule Clusters. J Phys Chem Lett 2021; 12:11022-11028. [PMID: 34739238 DOI: 10.1021/acs.jpclett.1c03309] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
We report an observation of spin-orbit excited dipole-bound states (DBSs) in arginine-iodide complexes (Arg·I-) by using temperature-dependent, wavelength-resolved "iodide-tagging" negative ion photoelectron spectroscopy. The observed DBSs are bound to the spin-orbit excited I(2P1/2) level of the neutral Arg·I complex in zwitterionic conformations and identified based on the resonant enhancement due to spin-orbit electronic autodetachment from the I(2P1/2) DBS to the I(2P3/2) neutral ground state. The observed DBS binding energies are correlated to the dipole moments of neutral Arg·I isomers and tautomers. This work thus demonstrates a new and generic spectroscopic approach to identify ion-molecule cluster conformations based on their distinguishable dipole moments.
Collapse
Affiliation(s)
- Wenjin Cao
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Hanhui Zhang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Qinqin Yuan
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Xiaoguo Zhou
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, P.R. China
| | - Steven R Kass
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Xue-Bin Wang
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| |
Collapse
|
22
|
Hsieh M, Huang G, Yu JK. Dipole‐bound states and substituent effects of Breslow intermediates in the enolate form. J CHIN CHEM SOC-TAIP 2021. [DOI: 10.1002/jccs.202100310] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Ming‐Hsiu Hsieh
- Institute of Bioinformatics and Systems Biology National Yang Ming Chiao Tung University Hsinchu Taiwan
| | - Gou‐Tao Huang
- Department of Biological Science and Technology National Yang Ming Chiao Tung University Hsinchu Taiwan
| | - Jen‐Shiang K. Yu
- Institute of Bioinformatics and Systems Biology, Department of Biological Science and Technology, and Institute of Molecular Medicine and Bioengineering National Yang Ming Chiao Tung University Hsinchu Taiwan
- Center for Intelligent Drug Systems and Smart Bio‐Devices National Yang Ming Chiao Tung University Hsinchu Taiwan
| |
Collapse
|
23
|
Zhang YR, Yuan DF, Qian CH, Wang LS. Observation of a dipole-bound excited state in 4-ethynylphenoxide and comparison with the quadrupole-bound excited state in the isoelectronic 4-cyanophenoxide. J Chem Phys 2021; 155:124305. [PMID: 34598564 DOI: 10.1063/5.0065510] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
Negative ions do not possess Rydberg states but can have Rydberg-like nonvalence excited states near the electron detachment threshold, including dipole-bound states (DBSs) and quadrupole-bound states (QBSs). While DBSs have been studied extensively, quadrupole-bound excited states have been more rarely observed. 4-cyanophenoxide (4CP-) was the first anion observed to possess a quadrupole-bound exited state 20 cm-1 below its detachment threshold. Here, we report the observation of a DBS in the isoelectronic 4-ethynylphenoxide anion (4EP-), providing a rare opportunity to compare the behaviors of a dipole-bound and a quadrupole-bound excited state in a pair of very similar anions. Photodetachment spectroscopy (PDS) of cryogenically cooled 4EP- reveals a DBS 76 cm-1 below its detachment threshold. Photoelectron spectroscopy (PES) at 266 nm shows that the electronic structure of 4EP- and 4CP- is nearly identical. The observed vibrational features in both the PDS and PES, as well as autodetachment from the nonvalence excited states, are also found to be similar for both anions. However, resonant two-photon detachment (R2PD) from the bound vibrational ground state is observed to be very different for the DBS in 4EP- and the QBS in 4CP-. The R2PD spectra reveal that decays take place from both the DBS and QBS to the respective anion ground electronic states within the 5 ns detachment laser pulse due to internal conversion followed by intramolecular vibrational redistribution and relaxation, but the decay mechanisms appear to be very different. In the R2PD spectrum of 4EP-, we observe strong threshold electron signals, which are due to detachment, by the second photon, of highly rotationally excited anions resulted from the decay of the DBS. On the other hand, in the R2PD spectrum of 4CP-, we observe well-resolved vibrational peaks due to the three lowest-frequency vibrational modes of 4CP-, which are populated from the decay of the QBS. The different behaviors of the R2PD spectra suggest unexpected differences between the relaxation mechanisms of the dipole-bound and quadrupole-bound excited states.
Collapse
Affiliation(s)
- Yue-Rou Zhang
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Dao-Fu Yuan
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Chen-Hui Qian
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Lai-Sheng Wang
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| |
Collapse
|
24
|
Anstöter CS, Verlet JRR. Modeling the Photoelectron Angular Distributions of Molecular Anions: Roles of the Basis Set, Orbital Choice, and Geometry. J Phys Chem A 2021; 125:4888-4895. [PMID: 34042462 DOI: 10.1021/acs.jpca.1c03379] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A study investigating the effect of the basis set, orbital choice, and geometry on the modeling of photoelectron angular distributions (PADs) of molecular anions is presented. Experimental and modeled PADs for a number of molecular anions, including both closed- and open-shell systems, are considered. Guidelines are suggested for chemists who wish to design calculations to capture the correct chemical physics of the anisotropy of photodetachment, while balancing the computational cost associated with larger molecular anions.
Collapse
Affiliation(s)
- Cate S Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| |
Collapse
|
25
|
Castellani ME, Verlet JRR. Intramolecular Photo-Oxidation as a Potential Source to Probe Biological Electron Damage: A Carboxylated Adenosine Analogue as Case Study. Molecules 2021; 26:2877. [PMID: 34067988 PMCID: PMC8152231 DOI: 10.3390/molecules26102877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 05/05/2021] [Accepted: 05/10/2021] [Indexed: 11/16/2022] Open
Abstract
A carboxylated adenosine analog (C-Ado-) has been synthesized and probed via time-resolved photoelectron spectroscopy in order to induce intra-molecular charge transfer from the carboxylic acid moiety to the nucleobase. Intra-molecular charge transfer can be exploited as starting point to probe low-energy electron (LEE) damage in DNA and its derivatives. Time-dependent density functional theory (TD-DFT) calculations at the B3LYP-6311G level of theory have been performed to verify that the highest occupied molecular orbital (HOMO) was located on carboxylic acid and that the lowest occupied molecular orbital (LUMO) was on the nucleobase. Hence, the carboxylic acid could work as electron source, whilst the nucleobase could serve the purpose of electron acceptor. The dynamics following excitation at 4.66 eV (266 nm) were probed using time-resolved photoelectron spectroscopy using probes at 1.55 eV (800 nm) and 3.10 eV (400 nm). The data show rapid decay of the excited state population and, based on the similarity of the overall dynamics to deoxy-adenosine monophosphate (dAMP-), it appears that the dominant decay mechanism is internal conversion following 1ππ* excitation of the nucleobase, rather than charge-transfer from the carboxylic acid to the nucleobase.
Collapse
|
26
|
Kang DH, Kim J, Cheng M, Kim SK. Mode-Specific Autodetachment Dynamics of an Excited Non-valence Quadrupole-Bound State. J Phys Chem Lett 2021; 12:1947-1954. [PMID: 33591762 DOI: 10.1021/acs.jpclett.1c00169] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The autodetachment dynamics of vibrational Feshbach resonances of the quadrupole-bound state (QBS) for the first time has been investigated in real time for the first excited state of the 4-cyanophenoxide (4-CP) anion. Individual vibrational resonances of the cryogenically cooled 4-CP QBS have been unambiguously identified, and their autodetachment rates state-specifically measured using the picosecond time-resolved pump-probe technique employing the photoelectron velocity-map imaging method. The autodetachment lifetime (τ) is found to be strongly dependent on mode, giving τ values of ∼56, ∼27, and ≤2.8 ps for the 12'1 (Evib = 406 cm-1), 12'2 (Evib = 806 cm-1), and 21'1 (Evib = 220 cm-1) modes, respectively. The striking mode-specific behavior of the QBS lifetime has been invoked by the physical model in which the loosely bound electron falls off by the dynamic wobbling of the three-dimensional quadrupole moment ellipsoid associated with the corresponding vibrational motion in the autodetachment process.
Collapse
Affiliation(s)
- Do Hyung Kang
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| | - Jinwoo Kim
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| | - Min Cheng
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Sang Kyu Kim
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| |
Collapse
|
27
|
Voora VK. Molecular Electron Affinities Using the Generalized Kohn-Sham Semicanonical Projected Random Phase Approximation. J Phys Chem Lett 2021; 12:433-439. [PMID: 33356311 DOI: 10.1021/acs.jpclett.0c03362] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The suitability of one-particle energies from the generalized Kohn-Sham semicanonical projected random phase approximation (GKS-spRPA) method for electron affinities of molecules is investigated. It is shown that the GKS-spPRA effective potential includes exact exchange and polarizability-dependent correlation terms that are necessary for the correct description of anionic systems. An O(N4) implementation that enables fast computation of electron affinities is presented. For model systems, I show that the GKS-spRPA approach is applicable for valence and nonvalence type anions with a maximum error of 0.13 eV for valence anionic states and 0.03 eV for nonvalence anionic states compared to equation of motion coupled cluster methods. For a series of perhalobenzene molecules, C6X6 (X= F, Cl, Br, and I), GKS-spRPA predicts that the ground-state character changes from a nonvalence-σ* type in C6F6- to valence-π* in C6Cl6- and valence-σ* in C6Br6- and C6I6-. Experimental implications of these findings are discussed.
Collapse
Affiliation(s)
- Vamsee K Voora
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Homi Bhabha Road, Colaba, Mumbai 400005, India
| |
Collapse
|
28
|
Upadhyay S, Dumi A, Shee J, Jordan KD. The role of high-order electron correlation effects in a model system for non-valence correlation-bound anions. J Chem Phys 2020; 153:224118. [DOI: 10.1063/5.0030942] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Affiliation(s)
- Shiv Upadhyay
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - Amanda Dumi
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - James Shee
- Department of Chemistry, University of California Berkeley, Berkeley, California 94720, USA
| | - Kenneth D. Jordan
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| |
Collapse
|
29
|
Simons J. Ejecting Electrons from Molecular Anions via Shine, Shake/Rattle, and Roll. J Phys Chem A 2020; 124:8778-8797. [DOI: 10.1021/acs.jpca.0c08016] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jack Simons
- Henry Eyring Center for Theoretical Chemistry, Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| |
Collapse
|
30
|
Kang DH, An S, Kim SK. Real-Time Autodetachment Dynamics of Vibrational Feshbach Resonances in a Dipole-Bound State. PHYSICAL REVIEW LETTERS 2020; 125:093001. [PMID: 32915603 DOI: 10.1103/physrevlett.125.093001] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 07/13/2020] [Accepted: 08/06/2020] [Indexed: 06/11/2023]
Abstract
Feshbach resonances corresponding to metastable vibrational states of the dipole-bound state (DBS) have been interrogated in real time for the first time. The state-specific autodetachment rates of the DBS of the phenoxide anion in the cryogenically cooled ion trap have been directly measured, giving τ∼33.5 ps for the lifetime of the most prominent 11^{'1} mode (519 cm^{-1}). Overall, the lifetime of the individual DBS state is strongly mode dependent to give τ∼5 ps for the 18^{'1} mode (632 cm^{-1}) and τ∼12 ps for the 11^{'2} mode (1036 cm^{-1}). The qualitative trend of the experiment could be successfully explained by the Fermi's golden rule. Autodetachment of the 11^{'1}18^{'1} combination mode is found to be much accelerated (τ≤1.4 ps) than expected, and its bifurcation dynamics into either the 11^{1}18^{0} or 11^{0}18^{1} state of the neutral core radical, according to the propensity rule of Δv=-1, could be distinctly differentiated through the photoelectron images to provide the unprecedented deep insights into the interaction between electronic and nuclear dynamics of the DBS, challenging the most sophisticated theoretical calculations.
Collapse
Affiliation(s)
- Do Hyung Kang
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| | - Sejun An
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| | - Sang Kyu Kim
- Department of Chemistry, KAIST, Daejeon 34141, Republic of Korea
| |
Collapse
|
31
|
Yuan DF, Liu Y, Qian CH, Zhang YR, Rubenstein BM, Wang LS. Observation of a π-Type Dipole-Bound State in Molecular Anions. PHYSICAL REVIEW LETTERS 2020; 125:073003. [PMID: 32857546 DOI: 10.1103/physrevlett.125.073003] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Revised: 06/07/2020] [Accepted: 07/28/2020] [Indexed: 06/11/2023]
Abstract
We report the observation of a π-type dipole-bound state (π-DBS) in cryogenically cooled deprotonated 9-anthrol molecular anions (9AT^{-}) by resonant two-photon photoelectron imaging. A DBS is observed 191 cm^{-1} (0.0237 eV) below the detachment threshold, and the existence of the π-DBS is revealed by a distinct (s+d)-wave photoelectron angular distribution. The π-DBS is stabilized by the large anisotropic in-plane polarizability of 9AT. The population of the dipole-forbidden π-DBS is proposed to be via a nonadiabatic coupling with the dipole-allowed σ-type DBS mediated by molecular rotations.
Collapse
Affiliation(s)
- Dao-Fu Yuan
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Yuan Liu
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Chen-Hui Qian
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Yue-Rou Zhang
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Brenda M Rubenstein
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Lai-Sheng Wang
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| |
Collapse
|
32
|
Liu G, Ciborowski SM, Graham JD, Buytendyk AM, Bowen KH. Photoelectron spectroscopic study of dipole-bound and valence-bound nitromethane anions formed by Rydberg electron transfer. J Chem Phys 2020; 153:044307. [DOI: 10.1063/5.0018346] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Gaoxiang Liu
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Sandra M. Ciborowski
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Jacob D. Graham
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Allyson M. Buytendyk
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Kit H. Bowen
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| |
Collapse
|
33
|
Anstöter CS, Curchod BFE, Verlet JRR. Geometric and electronic structure probed along the isomerisation coordinate of a photoactive yellow protein chromophore. Nat Commun 2020; 11:2827. [PMID: 32499507 PMCID: PMC7272410 DOI: 10.1038/s41467-020-16667-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Accepted: 05/15/2020] [Indexed: 01/29/2023] Open
Abstract
Understanding the connection between the motion of the nuclei in a molecule and the rearrangement of its electrons lies at the heart of chemistry. While many experimental methods have been developed to probe either the electronic or the nuclear structure on the timescale of atomic motion, very few have been able to capture both these changes in concert. Here, we use time-resolved photoelectron imaging to probe the isomerisation coordinate on the excited state of an isolated model chromophore anion of the photoactive yellow protein. By probing both the electronic structure changes as well as nuclear dynamics, we are able to uniquely measure isomerisation about a specific bond. Our results demonstrate that the photoelectron signal dispersed in time, energy and angle combined with calculations can track the evolution of both electronic and geometric structure along the adiabatic state, which in turn defines that chemical transformation. Resolving concerted nuclear and electronic motion in real-time is a primary goal in chemistry. The authors monitor nuclear and valence electronic dynamics in the excited state single-bond isomerisation of a chromophore of photoactive yellow protein, using time-resolved photoelectron imaging and electronic structure calculations.
Collapse
Affiliation(s)
- Cate S Anstöter
- Department of Chemistry, Durham University, Durham, DH1 3LE, UK
| | | | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham, DH1 3LE, UK.
| |
Collapse
|
34
|
Dobulis MA, Thompson MC, Sommerfeld T, Jarrold CC. Temporary anion states of fluorine substituted benzenes probed by charge transfer in O 2 -·C 6H 6-xF x (x = 0-5) ion-molecule complexes. J Chem Phys 2020; 152:204309. [PMID: 32486698 DOI: 10.1063/5.0011321] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The broadband photoelectron source realized by detaching O2 -·X (X = neutral unsaturated molecule) complexes offers a unique opportunity to probe temporary anion states of the unsaturated species. Detachment of the ion molecule complex typically accesses a dissociative portion of the neutral potential, creating a continuum electron source that can undergo scattering with X. We present the application of this new approach to electron-neutral scattering toward a study of the series of fluorinated benzenes via photoelectron spectroscopy of O2 -·C6H6-xFx (x = 0-6) measured with several photon energies. We compare these spectra to the reference O2 -·hexane spectrum and observe evidence of temporary anion states of C6H6-xFx for species with x = 0-5 in the form of enhanced signal intensity at electron kinetic energies coinciding with the energies of the temporary anions. Furthermore, we observe autodetachment features in the x = 3, 5 spectra. Results of calculations on the isolated symmetric isomer of C6H3F3 suggest that the molecule cannot support a weakly-bound non-valence state that could be associated with the observed autodetachment. However, C6HF5 - is predicted to support a valence bound state, which, if produced by charge transfer from O2 - with sufficient vibrational energy, may undergo autodetachment. Finally, the [O2·C6F6]- spectrum is unique insofar as the spectrum is substantially higher in binding energy and qualitatively different from the x = 0-5 spectra. This result suggests much stronger interactions and charge delocalization between O2 - and C6F6.
Collapse
Affiliation(s)
- Marissa A Dobulis
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, USA
| | - Michael C Thompson
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, USA
| | - Thomas Sommerfeld
- Department of Chemistry and Physics, Southeast Louisiana University, SLU 10878, Hammond, Louisiana 70402, USA
| | - Caroline Chick Jarrold
- Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, USA
| |
Collapse
|
35
|
Anstöter CS, Mensa-Bonsu G, Nag P, Ranković M, Kumar T P R, Boichenko AN, Bochenkova AV, Fedor J, Verlet JRR. Mode-Specific Vibrational Autodetachment Following Excitation of Electronic Resonances by Electrons and Photons. PHYSICAL REVIEW LETTERS 2020; 124:203401. [PMID: 32501066 DOI: 10.1103/physrevlett.124.203401] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Accepted: 05/01/2020] [Indexed: 06/11/2023]
Abstract
Electronic resonances commonly decay via internal conversion to vibrationally hot anions and subsequent statistical electron emission. We observed vibrational structure in such an emission from the nitrobenzene anion, in both the 2D electron energy loss and 2D photoelectron spectroscopy of the neutral and anion, respectively. The emission peaks could be correlated with calculated nonadiabatic coupling elements for vibrational modes to the electronic continuum from a nonvalence dipole-bound state. This autodetachment mechanism via a dipole-bound state is likely to be a common feature in both electron and photoelectron spectroscopies.
Collapse
Affiliation(s)
- Cate S Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Golda Mensa-Bonsu
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Pamir Nag
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 3, 18223 Prague 8, Czech Republic
| | - Miloš Ranković
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 3, 18223 Prague 8, Czech Republic
| | - Ragesh Kumar T P
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 3, 18223 Prague 8, Czech Republic
| | - Anton N Boichenko
- Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia
| | | | - Juraj Fedor
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Dolejškova 3, 18223 Prague 8, Czech Republic
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| |
Collapse
|
36
|
Verlet JRR, Anstöter CS, Bull JN, Rogers JP. Role of Nonvalence States in the Ultrafast Dynamics of Isolated Anions. J Phys Chem A 2020; 124:3507-3519. [PMID: 32233436 PMCID: PMC7212518 DOI: 10.1021/acs.jpca.0c01260] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Nonvalence states
of neutral molecules (Rydberg states) play important
roles in nonadiabatic dynamics of excited states. In anions, such
nonadiabatic transitions between nonvalence and valence states have
been much less explored even though they are believed to play important
roles in electron capture and excited state dynamics of anions. The
aim of this Feature Article is to provide an overview of recent experimental
observations, based on time-resolved photoelectron imaging, of valence
to nonvalence and nonvalence to valence transitions in anions and
to demonstrate that such dynamics may be commonplace in the excited
state dynamics of molecular anions and cluster anions.
Collapse
Affiliation(s)
- Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Cate S Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - James N Bull
- School of Chemistry, Norwich Research Park, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Joshua P Rogers
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| |
Collapse
|
37
|
Anusiewicz I, Skurski P, Simons J. Fate of Dipole-Bound Anion States when Hydrated. J Phys Chem A 2020; 124:2064-2076. [PMID: 32065750 DOI: 10.1021/acs.jpca.0c00360] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Many strongly polar molecules can form an anion by attaching an electron to either an empty or half-filled valence-bound (VB) orbital or a so-called dipole-bound (DB) orbital. These two families of orbitals can be very different in their radial extent (the former are usually more compact, while the latter are quite diffuse) and in the degree to which they are affected by surrounding solvent molecules. In this study, the effects of hydration (representative of strong solvation) on the DB state of a model polar species are investigated with an eye toward determining whether this state is stabilized or even persists when a few to 100 water molecules surround the polar molecule. It is found that in the presence of up to ca. 10-12 water molecules, the excess electron can remain in a DB orbital. However, once there are enough water molecules to form a complete first hydration shell (or more), the excess electron migrates into an orbital localized on the outer surface of the water solvent cage. These findings have implications on the possible role of DB states as doorways to facilitating electron attachment and subsequent electron transfer to VB states. It is shown that even when the electron is bound to the surface of the surrounding solvent, the dipole potential of the solute molecule can influence where on the surface the electron binds. It is also illustrated that using continuum dielectric methods to describe the hydration of DB states is fraught with danger because much of the outermost electron density in such states penetrates outside the boundary of the cavity used in these methods.
Collapse
Affiliation(s)
- Iwona Anusiewicz
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
| | - Piotr Skurski
- Laboratory of Quantum Chemistry, Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland.,Henry Eyring Center for Theoretical Chemistry, Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Jack Simons
- Henry Eyring Center for Theoretical Chemistry, Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| |
Collapse
|
38
|
Pshenichnyuk SA, Asfandiarov NL. Structural rearrangements as relaxation pathway for molecular negative ions formed via vibrational Feshbach resonance. Phys Chem Chem Phys 2020; 22:16150-16156. [PMID: 32638766 DOI: 10.1039/d0cp02647f] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The low-energy (0-15 eV) resonance electron interaction with two organic acids, oxaloacetic and α-ketoglutaric, is studied under gas-phase conditions using dissociative electron attachment spectroscopy. The most unexpected observation is the long-lived (microseconds) molecular negative ions formed by thermal electron attachment via the vibrational Feshbach resonance mechanism in both compounds. Unlike oxaloacetic acid, for which only one slow (microseconds) dissociative decay is detected, as many as five metastable negative ions are observed for α-ketoglutaric acid. These results are analyzed using density functional theory calculations and estimations of electron affinity using the experimental electron detachment times. The results are of considerable interest for understanding the fundamental mechanisms responsible for the dynamics of highly excited negative ions and the transformation pathways of biologically relevant molecules stimulated by excess electron attachment.
Collapse
Affiliation(s)
- Stanislav A Pshenichnyuk
- Institute of Molecule and Crystal Physics, Ufa Federal Research Centre, Russian Academy of Sciences, Prospekt Oktyabrya 151, 450075 Ufa, Russia.
| | - Nail L Asfandiarov
- Institute of Molecule and Crystal Physics, Ufa Federal Research Centre, Russian Academy of Sciences, Prospekt Oktyabrya 151, 450075 Ufa, Russia.
| |
Collapse
|
39
|
Bull JN, Anstöter CS, Verlet JRR. Ultrafast valence to non-valence excited state dynamics in a common anionic chromophore. Nat Commun 2019; 10:5820. [PMID: 31862884 PMCID: PMC6925192 DOI: 10.1038/s41467-019-13819-6] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2019] [Accepted: 11/27/2019] [Indexed: 12/19/2022] Open
Abstract
Non-valence states in neutral molecules (Rydberg states) have well-established roles and importance in photochemistry, however, considerably less is known about the role of non-valence states in photo-induced processes in anions. Here, femtosecond time-resolved photoelectron imaging is used to show that photoexcitation of the S1(ππ*) state of the methyl ester of deprotonated para-coumaric acid – a model chromophore for photoactive yellow protein (PYP) – leads to a bifurcation of the excited state wavepacket. One part remains on the S1(ππ*) state forming a twisted intermediate, whilst a second part leads to the formation of a non-valence (dipole-bound) state. Both populations eventually decay independently by vibrational autodetachment. Valence-to-non-valence internal conversion has hitherto not been observed in the intramolecular photophysics of an isolated anion, raising questions into how common such processes might be, given that many anionic chromophores have bright valence states near the detachment threshold. Photoactive biomolecules rely on chromophores whose photochemistry depends on the environment. Here, the excited state dynamics of a model for the anionic biochromophore in photoactive yellow protein is investigated by time-resolved photoelectron spectroscopy showing involvement of a non-valence state, and lack of E-Z isomerisation in the gas phase.
Collapse
Affiliation(s)
- James N Bull
- School of Chemistry, Norwich Research Park, University of East Anglia, Norwich, NR4 7TJ, UK
| | - Cate S Anstöter
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
| | - Jan R R Verlet
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK.
| |
Collapse
|
40
|
Zhu GZ, Wang LS. High-resolution photoelectron imaging and resonant photoelectron spectroscopy via noncovalently bound excited states of cryogenically cooled anions. Chem Sci 2019; 10:9409-9423. [PMID: 32055317 PMCID: PMC6984392 DOI: 10.1039/c9sc03861b] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2019] [Accepted: 09/16/2019] [Indexed: 01/12/2023] Open
Abstract
Valence-bound anions with polar neutral cores (μ > ∼2.5 D) can support dipole-bound excited states below the detachment threshold. These dipole-bound states (DBSs) are highly diffuse and the weakly bound electron in the DBS can be readily autodetached via vibronic coupling. Excited DBSs can be observed in photodetachment spectroscopy using a tunable laser. Tuning the detachment laser to above-threshold vibrational resonances yields vibrationally enhanced resonant photoelectron spectra, which are highly non-Franck-Condon with much richer vibrational information. This perspective describes recent advances in the studies of excited DBSs of cryogenically cooled anions using high-resolution photoelectron imaging (PEI) and resonant photoelectron spectroscopy (rPES). The basic features of dipole-bound excited states and highly non-Franck-Condon resonant photoelectron spectra will be discussed. The power of rPES to yield rich vibrational information beyond conventional PES will be highlighted, especially for low-frequency and Franck-Condon-inactive vibrational modes, which are otherwise not accessible from non-resonant conventional PES. Mode-selectivity and intra-molecular rescattering have been observed during the vibrationally induced autodetachment. Conformer-specific rPES is possible due to the different dipole-bound excited states of molecular conformers with polar neutral cores. For molecules with μ ≪ 2.5 D or without dipole moments, but large quadrupole moments, excited quadrupole-bound states can exist, which can also be used to conduct rPES.
Collapse
Affiliation(s)
- Guo-Zhu Zhu
- Department of Chemistry , Brown University , Providence , RI 02912 , USA .
| | - Lai-Sheng Wang
- Department of Chemistry , Brown University , Providence , RI 02912 , USA .
| |
Collapse
|
41
|
Castellani ME, Anstöter CS, Verlet JRR. On the stability of a dipole-bound state in the presence of a molecule. Phys Chem Chem Phys 2019; 21:24286-24290. [PMID: 31663558 DOI: 10.1039/c9cp04942h] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Dipole-bound states (DBSs) are diffuse non-valence molecular orbitals of anions where the electron is bound by the permanent dipole moment of the neutral core. Here, an experimental study of the stability of such orbitals under the influence of a perturbing molecular alkyl chain is presented. Photodetachment action and photoelectron imaging spectroscopy of five para-substituted phenolate anions with progressively longer alkyl chains show that the DBS survives in all cases, suggesting that the perturbation of the orbital is not critical to the existence of the DBS.
Collapse
|
42
|
Mensa-Bonsu G, Lietard A, Verlet JRR. Enhancement of electron accepting ability of para-benzoquinone by a single water molecule. Phys Chem Chem Phys 2019; 21:21689-21692. [PMID: 31552961 DOI: 10.1039/c9cp04559g] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Electron acceptors built upon the para-benzoquinone (pBQ) electrophore are ubiquitous in nature. Here, we present a frequency-resolved photoelectron spectroscopic study of the cold pBQ radical anion, pBQ-, solvated by a single water molecule, as commonly encountered in nature. Our results show that the electron accepting ability is enhanced by the single water molecule and by elevated temperatures.
Collapse
|
43
|
Liu G, Ciborowski SM, Graham JD, Buytendyk AM, Bowen KH. The ground state, quadrupole-bound anion of succinonitrile revisited. J Chem Phys 2019; 151:101101. [DOI: 10.1063/1.5114617] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Gaoxiang Liu
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Sandra M. Ciborowski
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Jacob D. Graham
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Allyson M. Buytendyk
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| | - Kit H. Bowen
- Department of Chemistry, Johns Hopkins University, 3400 N. Charles Street, Baltimore, Maryland 21218, USA
| |
Collapse
|
44
|
Zhu GZ, Cheung LF, Liu Y, Qian CH, Wang LS. Resonant Two-Photon Photoelectron Imaging and Intersystem Crossing from Excited Dipole-Bound States of Cold Anions. J Phys Chem Lett 2019; 10:4339-4344. [PMID: 31314535 DOI: 10.1021/acs.jpclett.9b01743] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
We report the observation of a dipole-bound state (DBS) 659 cm-1 below the electron detachment threshold of cryogenically cooled deprotonated 4,4'-biphenol anion (bPh-) and 19 of its lowest vibrational levels. Resonant two-photon photoelectron imaging (R2P-PEI) via the vibrational levels of the DBS displays a sharp peak with a constant binding energy. This observation indicates vertical detachment from the vibrational levels of the DBS to the corresponding neutral levels with the conservation of the vibrational energy, suggesting that the highly diffuse electron in the DBS has little effect on the neutral core. The R2P-PEI spectra also exhibit two features at lower binding energies, which come from intersystem crossings from the DBS to two lower-lying valence-bound triplet excited states of bPh-. The current study discloses the first R2P-PEI spectra from vibrational excited states of a DBS and direct spectroscopic evidence of transitions from a DBS to valence-bound states of anions.
Collapse
Affiliation(s)
- Guo-Zhu Zhu
- Department of Chemistry , Brown University , Providence , Rhode Island 02912 , United States
| | - Ling Fung Cheung
- Department of Chemistry , Brown University , Providence , Rhode Island 02912 , United States
| | - Yuan Liu
- Department of Chemistry , Brown University , Providence , Rhode Island 02912 , United States
| | - Chen-Hui Qian
- Department of Chemistry , Brown University , Providence , Rhode Island 02912 , United States
| | - Lai-Sheng Wang
- Department of Chemistry , Brown University , Providence , Rhode Island 02912 , United States
| |
Collapse
|
45
|
Mensa-Bonsu G, Tozer DJ, Verlet JRR. Photoelectron spectroscopic study of I -·ICF 3: a frontside attack S N2 pre-reaction complex. Phys Chem Chem Phys 2019; 21:13977-13985. [PMID: 30534728 DOI: 10.1039/c8cp06593d] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photodetachment and 2D photoelectron spectra of the mass-selected I-·CF3I complex are presented together with electronic structure calculations. Calculations show that the I- is located at the iodine side of CF3I. Vertical and adiabatic detachment energies were measured at 4.03 and approximately 3.8 eV, respectively. The photoelectron spectra and molecular orbitals show a significant covalent bonding character in the cluster. The presence of electronic excited states is observed. Below threshold, iodide is generated which can be assigned to the photoexcitation of degenerate charge-transfer bands from the off-axis p-orbitals localised on iodide. Near the onset of two spin-orbit thresholds, bright excited states are seen in the experiment and calculations. Excitation of these leads to the formation of slow electrons. The spectroscopy of I-·CF3I is compared to the well-studied I-·CH3I cluster, a pre-reaction complex in the text-book I- + CH3I SN2 reaction. Despite the reversed stereodynamics (i.e. inversion of the CX3 between X = H and F) of the SN2 reaction, striking similarities are seen. Both complexes possess charge transfer excited states near their respective vertical detachment energies and exhibit vibrational structure in their photoelectron spectra. The strong binding is consistent with observations in crossed molecular beam studies and molecular dynamics simulations that suggest that iodine as a leaving group in an SN2 reaction affects the reaction dynamics.
Collapse
|
46
|
Anstöter CS, Rogers JP, Verlet JRR. Spectroscopic Determination of an Anion−π Bond Strength. J Am Chem Soc 2019; 141:6132-6135. [DOI: 10.1021/jacs.9b01345] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Cate S. Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Joshua P. Rogers
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Jan R. R. Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| |
Collapse
|
47
|
Abstract
Electron attachment onto water clusters to form water cluster anions is studied by varying the point of electron attachment along a molecular beam axis and probing the produced cluster anions using photoelectron spectroscopy. The results show that the point of electron attachment has a clear effect on the final distribution of isomers for a cluster containing 78 water molecules, with isomer I formed preferentially near the start of the expansion and isomer II formed preferentially once the molecular beam has progressed for several millimeters. These changes can be accounted for by the cluster growth rate along the beam. Near the start of the expansion, cluster growth is proceeding rapidly with condensing water molecules solvating the electron, while further along the expansion, the growth has terminated and electrons are attached to large and cold preformed clusters, leading to the isomer associated with a loosely bound surface state.
Collapse
Affiliation(s)
- Aude Lietard
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| | - Jan R R Verlet
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| |
Collapse
|
48
|
Kairalapova A, Jordan KD, Maienshein DN, Fair MC, Falcetta MF. Prediction of a Nonvalence Temporary Anion Shape Resonance for a Model (H2O)4 System. J Phys Chem A 2019; 123:2719-2726. [DOI: 10.1021/acs.jpca.8b11881] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Arailym Kairalapova
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States
| | - Kenneth D. Jordan
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States
| | - Daniel N. Maienshein
- Department of Chemistry, Grove City College, Grove City, Pennsylvania 16127, United States
| | - Mark C. Fair
- Department of Chemistry, Grove City College, Grove City, Pennsylvania 16127, United States
| | - Michael F. Falcetta
- Department of Chemistry, Grove City College, Grove City, Pennsylvania 16127, United States
| |
Collapse
|
49
|
Rogers JP, Anstöter CS, Bull JN, Curchod BFE, Verlet JRR. Photoelectron Spectroscopy of the Hexafluorobenzene Cluster Anions: (C 6F 6) n- ( n = 1-5) and I -(C 6F 6). J Phys Chem A 2019; 123:1602-1612. [PMID: 30694676 DOI: 10.1021/acs.jpca.8b11627] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Frequency-resolved (2D) photoelectron (PE) spectra of the anionic clusters (C6F6) n-, for n = 1-5, and time-resolved PE spectra of I-C6F6 are presented using a newly built instrument and supported by electronic structure calculations. From the 2D PE spectra, the vertical detachment energy (VDE) of C6F6- was measured to be 1.60 ± 0.01 eV, and the adiabatic detachment energy (ADE) was ≤0.70 eV. The PE spectra also contain fingerprints of resonance dynamics over certain photon energy ranges, in agreement with the calculations. An action spectrum over the lowest resonance is also presented. The 2D spectra of (C6F6) n- show that the cluster can be described as C6F6-(C6F6) n-1. The VDE increases linearly (200 ± 20 meV n-1) due to the stabilizing influence on the anion of the solvating C6F6 molecules. For I-C6F6, action spectra of the absorption just below both detachment channels are presented. Time-resolved PE spectra of I-C6F6 excited at 3.10 eV and probed at 1.55 eV reveal a short-lived nonvalence state of C6F6- that coherently evolves into the valence ground state of the anion and induces vibrational motion along a specific buckling coordinate. Electronic structure calculations along the displacement of this mode show that at the extreme buckling angle the probe can access an excited state of the anion that is bound at that geometry but adiabatically unbound. Hence, slow electrons are emitted and show dynamics that predominantly probe the outer-turning point of the motion. A PE spectrum taken at t = 0 contains a vibrational structure assigned to a specific Raman- or IR-active mode of C6F6.
Collapse
Affiliation(s)
- Joshua P Rogers
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| | - Cate S Anstöter
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| | - James N Bull
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| | - Basile F E Curchod
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| | - Jan R R Verlet
- Department of Chemistry , Durham University , Durham DH1 3LE , United Kingdom
| |
Collapse
|
50
|
Liu G, Ciborowski SM, Pitts CR, Graham JD, Buytendyk AM, Lectka T, Bowen KH. Observation of the dipole- and quadrupole-bound anions of 1,4-dicyanocyclohexane. Phys Chem Chem Phys 2019; 21:18310-18315. [DOI: 10.1039/c9cp04010b] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Quadrupole-bound anions are negative ions in which their excess electrons are loosely bound by long-range electron-quadrupole attractions.
Collapse
Affiliation(s)
- Gaoxiang Liu
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| | - Sandra M. Ciborowski
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| | - Cody Ross Pitts
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| | - Jacob D. Graham
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| | - Allyson M. Buytendyk
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| | - Thomas Lectka
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| | - Kit H. Bowen
- Department of Chemistry
- Johns Hopkins University
- 3400 N. Charles Street
- Baltimore
- USA
| |
Collapse
|