1
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Bennett JJ, Murphy PV. Flow Chemistry for Synthesis of 2-(C-Glycosyl)acetates from Pyranoses via Tandem Wittig and Michael Reactions. Org Process Res Dev 2024; 28:1848-1859. [PMID: 38783857 PMCID: PMC11110061 DOI: 10.1021/acs.oprd.3c00414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 02/01/2024] [Accepted: 02/07/2024] [Indexed: 05/25/2024]
Abstract
C-Glycosyl compounds (C-glycosides) are a class of saccharide derivatives with improved stability over their O-linked counterparts. This paper reports the synthesis of several trans-2-(C-glycosyl)acetates via a tandem Wittig-Michael reaction from pyranoses (cyclic hemiacetals) using continuous flow processing, which gave improvements compared to reactions conducted in round-bottom flasks. Products were isolated in yields of >60% from reactions of benzyl-protected xylopyranoses, glucopyranoses, and galactopyranoses at higher temperatures and pressures, which were superior to yields from batch procedures. A two-step procedure involving the Wittig reaction followed by Michael reaction (intramolecular oxa-Michael) of the unsaturated ester obtained in the presence of DBU was developed. Reactions of protected mannopyranose gave low yields in corresponding reactions in flow due to competing C-2 epimerization.
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Affiliation(s)
- Jack J. Bennett
- School
of Biological and Chemical Sciences, University
of Galway, University Road, Galway H91 TK33, Ireland
| | - Paul V. Murphy
- School
of Biological and Chemical Sciences, University
of Galway, University Road, Galway H91 TK33, Ireland
- SSPC
− SFI Research Centre for Pharmaceuticals, University of Galway, University Road, Galway H91 TK33, Ireland
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2
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Gruber F, McDonagh AW, Rose V, Hunter J, Guasch L, Martin RE, Geigle SN, Britton R. sp 3 -Rich Heterocycle Synthesis on DNA: Application to DNA-Encoded Library Production. Angew Chem Int Ed Engl 2024; 63:e202319836. [PMID: 38330151 DOI: 10.1002/anie.202319836] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 01/26/2024] [Accepted: 01/30/2024] [Indexed: 02/10/2024]
Abstract
DNA encoded library (DEL) synthesis represents a convenient means to produce, annotate and store large collections of compounds in a small volume. While DELs are well suited for drug discovery campaigns, the chemistry used in their production must be compatible with the DNA tag, which can limit compound class accessibility. As a result, most DELs are heavily populated with peptidomimetic and sp2 -rich molecules. Herein, we show that sp3 -rich mono- and bicyclic heterocycles can be made on DNA from ketochlorohydrin aldol products through a reductive amination and cyclization process. The resulting hydroxypyrrolidines possess structural features that are desirable for DELs and target a distinct region of pharmaceutically relevant chemical space.
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Affiliation(s)
- Felix Gruber
- Roche Pharma Research and Early Development (pRED), Roche Innovation Center Basel, F. Hoffmann-La Roche Ltd., Grenzacherstrasse 124, 4070, Basel, Switzerland
| | - Anthony W McDonagh
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada
| | - Victoria Rose
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada
| | - James Hunter
- Roche Pharma Research and Early Development (pRED), Roche Innovation Center Basel, F. Hoffmann-La Roche Ltd., Grenzacherstrasse 124, 4070, Basel, Switzerland
| | - Laura Guasch
- Roche Pharma Research and Early Development (pRED), Roche Innovation Center Basel, F. Hoffmann-La Roche Ltd., Grenzacherstrasse 124, 4070, Basel, Switzerland
| | - Rainer E Martin
- Roche Pharma Research and Early Development (pRED), Roche Innovation Center Basel, F. Hoffmann-La Roche Ltd., Grenzacherstrasse 124, 4070, Basel, Switzerland
| | - Stefanie N Geigle
- Roche Pharma Research and Early Development (pRED), Roche Innovation Center Basel, F. Hoffmann-La Roche Ltd., Grenzacherstrasse 124, 4070, Basel, Switzerland
| | - Robert Britton
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada
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3
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Conforti I, Benzi A, Caffa I, Bruzzone S, Nencioni A, Marra A. Iminosugar-Based Nicotinamide Phosphoribosyltransferase (NAMPT) Inhibitors as Potential Anti-Pancreatic Cancer Agents. Pharmaceutics 2023; 15:pharmaceutics15051472. [PMID: 37242714 DOI: 10.3390/pharmaceutics15051472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 04/28/2023] [Accepted: 05/09/2023] [Indexed: 05/28/2023] Open
Abstract
The nicotinamide phosphoribosyltransferase (NAMPT) is considered a very promising therapeutic target because it is overexpressed in pancreatic cancer. Although many inhibitors have been prepared and tested, clinical trials have shown that NAMPT inhibition may result in severe haematological toxicity. Therefore, the development of conceptually new inhibitors is an important and challenging task. We synthesized ten β-d-iminoribofuranosides bearing various heterocycle-based chains carbon-linked to the anomeric position starting from non-carbohydrate derivatives. They were then submitted to NAMPT inhibition assays, as well as to pancreatic tumor cells viability and intracellular NAD+ depletion evaluation. The biological activity of the compounds was compared to that of the corresponding analogues lacking the carbohydrate unit to assess, for the first time, the contribution of the iminosugar moiety to the properties of these potential antitumor agents.
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Affiliation(s)
- Irene Conforti
- Institut des Biomolécules Max Mousseron (IBMM, UMR 5247), Université de Montpellier, Pôle Chimie Balard Recherche, 1919 Route de Mende, CEDEX 5, 34293 Montpellier, France
| | - Andrea Benzi
- Dipartimento di Medicina Sperimentale-DIMES, Scuola di Scienze Mediche e Farmaceutiche, Università degli Studi di Genova, Viale Benedetto XV 1, 16132 Genova, Italy
| | - Irene Caffa
- Dipartimento di Medicina Interna e Specialità Mediche-DIMI, Università degli Studi di Genova, Viale Benedetto XV 6, 16132 Genova, Italy
- IRCCS, Ospedale Policlinico San Martino, 16132 Genova, Italy
| | - Santina Bruzzone
- Dipartimento di Medicina Sperimentale-DIMES, Scuola di Scienze Mediche e Farmaceutiche, Università degli Studi di Genova, Viale Benedetto XV 1, 16132 Genova, Italy
- IRCCS, Ospedale Policlinico San Martino, 16132 Genova, Italy
| | - Alessio Nencioni
- Dipartimento di Medicina Interna e Specialità Mediche-DIMI, Università degli Studi di Genova, Viale Benedetto XV 6, 16132 Genova, Italy
- IRCCS, Ospedale Policlinico San Martino, 16132 Genova, Italy
| | - Alberto Marra
- Institut des Biomolécules Max Mousseron (IBMM, UMR 5247), Université de Montpellier, Pôle Chimie Balard Recherche, 1919 Route de Mende, CEDEX 5, 34293 Montpellier, France
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4
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Tangara S, Front S, Martin OR, Gallienne E. Intramolecular Palladium-Catalyzed Carboamination for the Stereoselective Synthesis of Five-Membered Iminosugar C-Glycosides. J Org Chem 2023; 88:86-96. [PMID: 36535066 DOI: 10.1021/acs.joc.2c01866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
We report here a new method for the stereoselective synthesis of five-membered iminosugar C-glycosides using an intramolecular palladium-catalyzed carboamination. We have prepared efficiently two sugar-derived aminoalkenes, which were submitted to the carboamination conditions in the presence of different aryl bromides. A small library of protected iminosugars carrying a 1-C-arylmethyl substituent was obtained, and some of them were fully deprotected to yield original iminosugar C-glycosides. This methodology provides one of the shortest pathways to this family of molecules.
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Affiliation(s)
- Salia Tangara
- Institut de Chimie Organique et Analytique (ICOA), UMR CNRS 7311, Université d'Orléans, Rue de Chartres, P.O. Box 6759, 45067 Orléans Cedex 2, France
| | - Sophie Front
- Institut de Chimie Organique et Analytique (ICOA), UMR CNRS 7311, Université d'Orléans, Rue de Chartres, P.O. Box 6759, 45067 Orléans Cedex 2, France
| | - Olivier R Martin
- Institut de Chimie Organique et Analytique (ICOA), UMR CNRS 7311, Université d'Orléans, Rue de Chartres, P.O. Box 6759, 45067 Orléans Cedex 2, France
| | - Estelle Gallienne
- Institut de Chimie Organique et Analytique (ICOA), UMR CNRS 7311, Université d'Orléans, Rue de Chartres, P.O. Box 6759, 45067 Orléans Cedex 2, France
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5
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Mesa JM, Comini MA, Dibello E, Gamenara D. Organocatalytic synthesis and anti‐trypanosomal activity evaluation of L‐pentofuranose‐mimetic iminosugars. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Juan Manuel Mesa
- Universidad de la Republica Uruguay Organic chemistry department Gral. Flores 2124 11800 Montevideo URUGUAY
| | - Marcelo Alberto Comini
- Institut Pasteur Montevideo Group Redox Biology of Trypanosomes Mataojo 2020 11400 Montevideo URUGUAY
| | - Estefania Dibello
- Universidad de la República Uruguay Departamento de Química Orgánica Gral. Flores 21 24 11800 Montevideo URUGUAY
| | - Daniela Gamenara
- Universidad de la Republica Facultad de Quimica Organic Chemistry Department Gral. Flores 2124 11800 Montevideo URUGUAY
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6
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González-Cuesta M, Sidhu P, Ashmus RA, Males A, Proceviat C, Madden Z, Rogalski JC, Busmann JA, Foster LJ, García Fernández JM, Davies GJ, Ortiz Mellet C, Vocadlo DJ. Bicyclic Picomolar OGA Inhibitors Enable Chemoproteomic Mapping of Its Endogenous Post-translational Modifications. J Am Chem Soc 2022; 144:832-844. [PMID: 34985906 DOI: 10.1021/jacs.1c10504] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Owing to its roles in human health and disease, the modification of nuclear, cytoplasmic, and mitochondrial proteins with O-linked N-acetylglucosamine residues (O-GlcNAc) has emerged as a topic of great interest. Despite the presence of O-GlcNAc on hundreds of proteins within cells, only two enzymes regulate this modification. One of these enzymes is O-GlcNAcase (OGA), a dimeric glycoside hydrolase that has a deep active site cleft in which diverse substrates are accommodated. Chemical tools to control OGA are emerging as essential resources for helping to decode the biochemical and cellular functions of the O-GlcNAc pathway. Here we describe rationally designed bicyclic thiazolidine inhibitors that exhibit superb selectivity and picomolar inhibition of human OGA. Structures of these inhibitors in complex with human OGA reveal the basis for their exceptional potency and show that they extend out of the enzyme active site cleft. Leveraging this structure, we create a high affinity chemoproteomic probe that enables simple one-step purification of endogenous OGA from brain and targeted proteomic mapping of its post-translational modifications. These data uncover a range of new modifications, including some that are less-known, such as O-ubiquitination and N-formylation. We expect that these inhibitors and chemoproteomics probes will prove useful as fundamental tools to decipher the mechanisms by which OGA is regulated and directed to its diverse cellular substrates. Moreover, the inhibitors and structures described here lay out a blueprint that will enable the creation of chemical probes and tools to interrogate OGA and other carbohydrate active enzymes.
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Affiliation(s)
- Manuel González-Cuesta
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, 41012 Sevilla, Spain
| | - Peter Sidhu
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.,Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - Roger A Ashmus
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada
| | - Alexandra Males
- Department of Chemistry. University of York, York YO10 5DD, United Kingdom
| | - Cameron Proceviat
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada
| | - Zarina Madden
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada
| | - Jason C Rogalski
- Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - Jil A Busmann
- Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada
| | - Leonard J Foster
- Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - José M García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC, Universidad de Sevilla, 41092 Sevilla, Spain
| | - Gideon J Davies
- Department of Chemistry. University of York, York YO10 5DD, United Kingdom
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, 41012 Sevilla, Spain
| | - David J Vocadlo
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.,Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada
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7
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Dhara D, Dhara A, Bennett J, Murphy PV. Cyclisations and Strategies for Stereoselective Synthesis of Piperidine Iminosugars. CHEM REC 2021; 21:2958-2979. [PMID: 34713557 DOI: 10.1002/tcr.202100221] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Revised: 10/07/2021] [Accepted: 10/11/2021] [Indexed: 12/31/2022]
Abstract
This personal account focuses on synthesis of polyhydroxylated piperidines, a subset of compounds within the iminosugar family. Cyclisations to form the piperidine ring include reductive amination, substitution via amines, iminium ions and cyclic nitrones, transamidification (N-acyl transfer), addition to alkenes, ring contraction and expansion, photoinduced electron transfer, multicomponent Ugi reaction and ring closing metathesis. Enantiomerically pure piperidines are obtained from chiral pool precursors (e. g. sugars, amino acids, Garner's aldehyde) or asymmetric reactions (e. g. epoxidation, dihydroxylation, aminohydroxylation, aldol, biotransformation). Our laboratory have contributed cascades based on reductive amination from glycosyl azide precursors as well as Huisgen azide-alkene cycloaddition. The latter's combination with allylic azide rearrangement has given substituted piperidines, including those with quaternary centres adjacent to nitrogen.
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Affiliation(s)
- Debashis Dhara
- School of Biological and Chemical Sciences, NUI Galway, University Road, Galway, H91 TK33, Ireland.,Unité de Chimie des Biomolécules, UMR 3523 CNRS, Institut Pasteur, Université de Paris, 28 rue du Dr Roux, 75015, Paris, France
| | - Ashis Dhara
- School of Biological and Chemical Sciences, NUI Galway, University Road, Galway, H91 TK33, Ireland
| | - Jack Bennett
- School of Biological and Chemical Sciences, NUI Galway, University Road, Galway, H91 TK33, Ireland
| | - Paul V Murphy
- School of Biological and Chemical Sciences, NUI Galway, University Road, Galway, H91 TK33, Ireland.,SSPC - The Science Foundation Ireland Research Centre for Pharmaceuticals, NUI Galway, University Road, Galway, H91 TK33, Ireland
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8
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Ashmus RA, Wang Y, González-Cuesta M, King DT, Tiet B, Gilormini PA, García Fernández JM, Ortiz Mellet C, Britton R, Vocadlo DJ. Rational design of cell active C2-modified DGJ analogues for the inhibition of human α-galactosidase A (GALA). Org Biomol Chem 2021; 19:8057-8062. [PMID: 34494637 DOI: 10.1039/d1ob01526e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the rational design and synthesis of C2-modified DGJ analogues to improve the selective inhibition of human GALA over other glycosidases. We prepare these analogues using a concise route from non-carbohydrate materials and demonstrate the most selective inhibitor 7c (∼100-fold) can act in Fabry patient cells to drive reductions in levels of the disease-relevant glycolipid Gb3.
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Affiliation(s)
- Roger A Ashmus
- Department of Chemistry and Simon Fraser University, Burnaby, British Columbia, Canada.
| | - Yang Wang
- Department of Chemistry and Simon Fraser University, Burnaby, British Columbia, Canada.
| | - Manuel González-Cuesta
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Sevilla 41012, Spain
| | - Dustin T King
- Department of Molecular Biology and Biochemistry Simon Fraser University, Burnaby, British Columbia, Canada
| | - Ben Tiet
- Department of Chemistry and Simon Fraser University, Burnaby, British Columbia, Canada.
| | | | - José M García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Sevilla 41092, Spain
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Sevilla 41012, Spain
| | - Robert Britton
- Department of Chemistry and Simon Fraser University, Burnaby, British Columbia, Canada.
| | - David J Vocadlo
- Department of Chemistry and Simon Fraser University, Burnaby, British Columbia, Canada. .,Department of Molecular Biology and Biochemistry Simon Fraser University, Burnaby, British Columbia, Canada
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9
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Abstract
Glycomimetics are structural mimics of naturally occurring carbohydrates and represent important therapeutic leads in several disease treatments. However, the structural and stereochemical complexity inherent to glycomimetics often challenges medicinal chemistry efforts and is incompatible with diversity-oriented synthesis approaches. Here, we describe a one-pot proline-catalyzed aldehyde α-functionalization/aldol reaction that produces an array of stereochemically well-defined glycomimetic building blocks containing fluoro, chloro, bromo, trifluoromethylthio and azodicarboxylate functional groups. Using density functional theory calculations, we demonstrate both steric and electrostatic interactions play key diastereodiscriminating roles in the dynamic kinetic resolution. The utility of this simple process for generating large and diverse libraries of glycomimetics is demonstrated in the rapid production of iminosugars, nucleoside analogues, carbasugars and carbohydrates from common intermediates.
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10
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Ferjancic Z, Saicic RN. Combining Organocatalyzed Aldolization and Reductive Amination: An Efficient Reaction Sequence for the Synthesis of Iminosugars. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100398] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Zorana Ferjancic
- University of Belgrade – Faculty of Chemistry Studentski trg 16, POB 51 11158 Belgrade 118 Serbia
| | - Radomir N. Saicic
- University of Belgrade – Faculty of Chemistry Studentski trg 16, POB 51 11158 Belgrade 118 Serbia
- Serbian Academy of Sciences and Arts Kneza Mihaila 35 11 000 Belgrade Serbia
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11
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Okamoto K, Tsutsui M, Morizumi H, Kitano Y, Chiba K. Electrochemical Synthesis of Imino‐
C
‐Nucleosides by “Reactivity Switching” Methodology for
in situ
Generated Glycoside Donors. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100106] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Kazuhiro Okamoto
- Department of Applied Biological Science Tokyo University of Agriculture and Technology 3-5-8 Saiwai-cho Fuchu, Tokyo 183-8509 Japan
| | - Mizuki Tsutsui
- Department of Applied Biological Science Tokyo University of Agriculture and Technology 3-5-8 Saiwai-cho Fuchu, Tokyo 183-8509 Japan
| | - Haruka Morizumi
- Department of Applied Biological Science Tokyo University of Agriculture and Technology 3-5-8 Saiwai-cho Fuchu, Tokyo 183-8509 Japan
| | - Yoshikazu Kitano
- Department of Applied Biological Science Tokyo University of Agriculture and Technology 3-5-8 Saiwai-cho Fuchu, Tokyo 183-8509 Japan
| | - Kazuhiro Chiba
- Department of Applied Biological Science Tokyo University of Agriculture and Technology 3-5-8 Saiwai-cho Fuchu, Tokyo 183-8509 Japan
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12
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Quintard A. Copper Catalyzed Decarboxylative Functionalization of Ketoacids. CHEM REC 2021; 21:3382-3393. [PMID: 33750015 DOI: 10.1002/tcr.202100045] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 03/08/2021] [Accepted: 03/09/2021] [Indexed: 12/30/2022]
Abstract
Selective copper catalyzed activation of ketoacids and notably bio-sourced 1,3-acetonedicarboxylic acid, represents an attractive strategy to solve key synthetic challenges. Condensation with aldehydes under exceedingly mild conditions can create more rapidly known natural products scaffolds such as 1,3 polyols. In this account, the recent progress in this field, notably through multicatalytic combination with organocatalysis is described. In addition to the rapid preparation of natural product fragments, cascade incorporation of fluorine also provided new type of synthetic analogues of improved properties in a broad range of applications.
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Affiliation(s)
- Adrien Quintard
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France
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13
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Chevis PJ, Pyne SG. Synthesis of enantioenriched α-heteroatom functionalised aldehydes by chiral organocatalysis and their synthetic applications. Org Chem Front 2021. [DOI: 10.1039/d1qo00101a] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Asymmetric organocatalysis is a versatile method for the enantioselective α-functionalisation of aldehydes. The synthetic scope for chiral α-heteroatom substituted aldehydes is examined including their applications in synthesis.
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Affiliation(s)
- Philip J. Chevis
- School of Chemistry and Molecular Bioscience
- University of Wollongong
- Wollongong
- Australia
| | - Stephen G. Pyne
- School of Chemistry and Molecular Bioscience
- University of Wollongong
- Wollongong
- Australia
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14
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Li S, Jaszczyk J, Pannecoucke X, Poisson T, Martin OR, Nicolas C. Stereospecific Synthesis of Glycoside Mimics Through Migita‐Kosugi‐Stille Cross‐Coupling Reactions of Chemically and Configurationally Stable 1‐
C
‐Tributylstannyl Iminosugars. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000886] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Sizhe Li
- Institut de Chimie Organique et Analytique UMR 7311 Université d'Orléans et CNRS Rue de Chartres, BP 6759 45067 Orléans cedex 2 France
| | - Justyna Jaszczyk
- Institut de Chimie Organique et Analytique UMR 7311 Université d'Orléans et CNRS Rue de Chartres, BP 6759 45067 Orléans cedex 2 France
| | - Xavier Pannecoucke
- Normandie Université, COBRA, UMR 6014 et FR 3038 Université de Rouen, INSA Rouen, CNRS 1 rue Tesnière 76821 Mont Saint-Aignan Cedex France
| | - Thomas Poisson
- Normandie Université, COBRA, UMR 6014 et FR 3038 Université de Rouen, INSA Rouen, CNRS 1 rue Tesnière 76821 Mont Saint-Aignan Cedex France
- Institut Universitaire de France 1 rue Descartes 75231 Paris France
| | - Olivier R. Martin
- Institut de Chimie Organique et Analytique UMR 7311 Université d'Orléans et CNRS Rue de Chartres, BP 6759 45067 Orléans cedex 2 France
| | - Cyril Nicolas
- Institut de Chimie Organique et Analytique UMR 7311 Université d'Orléans et CNRS Rue de Chartres, BP 6759 45067 Orléans cedex 2 France
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15
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Development of Multi‐Catalytic Strategies Based on the Combination between Iron‐/Copper‐ and Organo‐Catalysis. Isr J Chem 2020. [DOI: 10.1002/ijch.202000018] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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16
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Tamburrini A, Colombo C, Bernardi A. Design and synthesis of glycomimetics: Recent advances. Med Res Rev 2020; 40:495-531. [DOI: 10.1002/med.21625] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2019] [Revised: 06/06/2019] [Accepted: 07/09/2019] [Indexed: 12/16/2022]
Affiliation(s)
- Alice Tamburrini
- Dipartimento di ChimicaUniversita’ degli Studi di Milano Milano Italy
| | - Cinzia Colombo
- Dipartimento di ChimicaUniversita’ degli Studi di Milano Milano Italy
| | - Anna Bernardi
- Dipartimento di ChimicaUniversita’ degli Studi di Milano Milano Italy
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17
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Fouad MA, Abdel-Hamid H, Ayoup MS. Two decades of recent advances of Ugi reactions: synthetic and pharmaceutical applications. RSC Adv 2020; 10:42644-42681. [PMID: 35514898 PMCID: PMC9058431 DOI: 10.1039/d0ra07501a] [Citation(s) in RCA: 70] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Accepted: 10/24/2020] [Indexed: 12/30/2022] Open
Abstract
Multicomponent reactions (MCRs) are powerful synthetic tools in which more than two starting materials couple with each other to form multi-functionalized compounds in a one-pot process, the so-called “tandem”, “domino” or “cascade” reaction, or utilizing an additional step without changing the solvent, the so-called a sequential-addition procedure, to limit the number of synthetic steps, while increasing the complexity and the molecular diversity, which are highly step-economical reactions. The Ugi reaction, one of the most common multicomponent reactions, has recently fascinated chemists with the high diversity brought by its four- or three-component-based isonitrile. The Ugi reaction has been introduced in organic synthesis as a novel, efficient and useful tool for the preparation of libraries of multifunctional peptides, natural products, and heterocyclic compounds with stereochemistry control. In this review, we highlight the recent advances of the Ugi reaction in the last two decades from 2000–2019, mainly in the synthesis of linear or cyclic peptides, heterocyclic compounds with versatile ring sizes, and natural products, as well as the enantioselective Ugi reactions. Meanwhile, the applications of these compounds in pharmaceutical trials are also discussed. We highlight the recent advances of the Ugi reaction in the last two decades from 2000–2019, mainly in the synthesis of linear or cyclic peptides, heterocyclic compounds with versatile ring sizes, and natural products, as well as the enantioselective Ugi reactions.![]()
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Affiliation(s)
- Manar Ahmed Fouad
- Department of Chemistry
- Faculty of Science
- Alexandria University
- Alexandria 21321
- Egypt
| | - Hamida Abdel-Hamid
- Department of Chemistry
- Faculty of Science
- Alexandria University
- Alexandria 21321
- Egypt
| | - Mohammed Salah Ayoup
- Department of Chemistry
- Faculty of Science
- Alexandria University
- Alexandria 21321
- Egypt
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18
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Sánchez-Fernández EM, García-Moreno MI, García-Hernández R, Padrón JM, García Fernández JM, Gamarro F, Ortiz Mellet C. Thiol-ene "Click" Synthesis and Pharmacological Evaluation of C-Glycoside sp 2-Iminosugar Glycolipids. Molecules 2019; 24:E2882. [PMID: 31398901 PMCID: PMC6720825 DOI: 10.3390/molecules24162882] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 08/05/2019] [Accepted: 08/07/2019] [Indexed: 12/30/2022] Open
Abstract
The unique stereoelectronic properties of sp2-iminosugars enable their participation in glycosylation reactions, thereby behaving as true carbohydrate chemical mimics. Among sp2-iminosugar conjugates, the sp2-iminosugar glycolipids (sp2-IGLs) have shown a variety of interesting pharmacological properties ranging from glycosidase inhibition to antiproliferative, antiparasitic, and anti-inflammatory activities. Developing strategies compatible with molecular diversity-oriented strategies for structure-activity relationship studies was therefore highly wanted. Here we show that a reaction sequence consisting in stereoselective C-allylation followed by thiol-ene "click" coupling provides a very convenient access to α-C-glycoside sp2-IGLs. Both the glycone moiety and the aglycone tail can be modified by using sp2-iminosugar precursors with different configurational profiles (d-gluco or d-galacto in this work) and varied thiols, as well as by oxidation of the sulfide adducts (to the corresponding sulfones in this work). A series of derivatives was prepared in this manner and their glycosidase inhibitory, antiproliferative and antileishmanial activities were evaluated in different settings. The results confirm that the inhibition of glycosidases, particularly α-glucosidase, and the antitumor/leishmanicidal activities are unrelated. The data are also consistent with the two later activities arising from the ability of the sp2-IGLs to interfere in the immune system response in a cell line and cell context dependent manner.
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Affiliation(s)
- Elena M Sánchez-Fernández
- Department of Organic Chemistry, Faculty of Chemistry, University of Seville, C/Profesor García González 1, 41012 Seville, Spain.
| | - M Isabel García-Moreno
- Department of Organic Chemistry, Faculty of Chemistry, University of Seville, C/Profesor García González 1, 41012 Seville, Spain
| | - Raquel García-Hernández
- Instituto de Parasitología y Biomedicina "López-Neyra", IPBLN-CSIC, Parque Tecnológico de Ciencias de la Salud, 18016 Granada, Spain
| | - José M Padrón
- BioLab, Instituto Universitario de Bio-Orgánica Antonio González (IUBO AG), Centro de Investigaciones Biomédicas de Canarias (CIBCAN), Universidad de La Laguna, 38206 La Laguna, Spain
| | - José M García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC - University of Sevilla, Avda. Américo Vespucio 49, 41092 Sevilla, Spain
| | - Francisco Gamarro
- Instituto de Parasitología y Biomedicina "López-Neyra", IPBLN-CSIC, Parque Tecnológico de Ciencias de la Salud, 18016 Granada, Spain
| | - Carmen Ortiz Mellet
- Department of Organic Chemistry, Faculty of Chemistry, University of Seville, C/Profesor García González 1, 41012 Seville, Spain.
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19
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Cuffaro D, Landi M, D'Andrea F, Guazzelli L. Preparation of 1,6-di-deoxy-d-galacto and 1,6-di-deoxy-l-altro nojirimycin derivatives by aminocyclization of a 1,5-dicarbonyl derivative. Carbohydr Res 2019; 482:107744. [PMID: 31306898 DOI: 10.1016/j.carres.2019.107744] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2019] [Revised: 07/05/2019] [Accepted: 07/10/2019] [Indexed: 12/29/2022]
Abstract
Iminosugars are known glycosidase inhibitors which are the subject of drug development efforts against several diseases. The access to structurally-related families of iminosugars is of primary importance for running structure-activity relationship studies. In this work, the double reductive amination (aminocyclization) reaction of a dicarbonyl derivative of the l-arabino series, in turn obtained from lactose, is reported. Different ratios of 1,6-di-deoxy-d-galacto and 1,6-di-deoxy-l-altro nojirimycin derivatives were obtained depending on the amine employed in this transformation which provided an insight into the effects of their structure on the outcome of the reaction. Of particular interest were the results obtained when two enantiomeric amino acids (d-Phe-OMe and l-Phe-OMe) were used, which resulted in the inversion of the reaction stereoselectivity.
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Affiliation(s)
- Doretta Cuffaro
- Dipartimento di Farmacia, Università di Pisa, Via Bonanno 6/33, 56126, Pisa, Italy
| | - Martina Landi
- Dipartimento di Farmacia, Università di Pisa, Via Bonanno 6/33, 56126, Pisa, Italy
| | - Felicia D'Andrea
- Dipartimento di Farmacia, Università di Pisa, Via Bonanno 6/33, 56126, Pisa, Italy.
| | - Lorenzo Guazzelli
- Dipartimento di Farmacia, Università di Pisa, Via Bonanno 6/33, 56126, Pisa, Italy.
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20
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Michalak SE, Nam S, Kwon DM, Horne DA, Vanderwal CD. A Chlorine-Atom-Controlled Terminal-Epoxide-Initiated Bicyclization Cascade Enables a Synthesis of the Potent Cytotoxins Haterumaimides J and K. J Am Chem Soc 2019; 141:9202-9206. [PMID: 31129963 DOI: 10.1021/jacs.9b04702] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Haterumaimide J (hatJ) is reportedly the most cytotoxic member of the lissoclimide family of labdane diterpenoids. The unusual functional group arrangement of hatJ-C18 oxygenation and C2 chlorination-resisted our efforts at synthesis until we adopted an approach based on rarely studied terminal epoxide-based cation-π bicyclizations that is described herein. Using the C2-chlorine atom as a key stereocontrol element and a furan as a nucleophilic terminator, the key structural features of hatJ were rapidly constructed. The 18-step stereoselective synthesis features applications of chiral pool starting materials, and catalyst-, substrate-, and auxiliary-based stereocontrol. Access to hatJ and its acetylated congener hatK permitted their biological evaluation against aggressive human cancer cell lines.
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Affiliation(s)
- Sharon E Michalak
- Department of Chemistry , University of California, Irvine , 1102 Natural Sciences II , Irvine , California 92697-2025 , United States
| | - Sangkil Nam
- Department of Molecular Medicine , Beckman Research Institute, City of Hope Comprehensive Cancer Center , 1500 East Duarte Road , Duarte , California 91010 , United States
| | - David M Kwon
- Department of Molecular Medicine , Beckman Research Institute, City of Hope Comprehensive Cancer Center , 1500 East Duarte Road , Duarte , California 91010 , United States
| | - David A Horne
- Department of Molecular Medicine , Beckman Research Institute, City of Hope Comprehensive Cancer Center , 1500 East Duarte Road , Duarte , California 91010 , United States
| | - Christopher D Vanderwal
- Department of Chemistry , University of California, Irvine , 1102 Natural Sciences II , Irvine , California 92697-2025 , United States
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21
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Tan TD, Chen YB, Yang MY, Wang JL, Su HZ, Hong FL, Zhou JM, Ye LW. Stereoselective synthesis of 2,5-disubstituted pyrrolidines via gold-catalysed anti-Markovnikov hydroamination-initiated tandem reactions. Chem Commun (Camb) 2019; 55:9923-9926. [PMID: 31368462 DOI: 10.1039/c9cc05295j] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
A series of gold-catalysed intramolecular anti-Markovnikov hydroamination-initiated azidation, allylation and heteroarylation reactions of chiral homopropargyl sulfonamides have been developed. Various enantioenriched 2,5-disubstituted pyrrolidines are obtained in moderate to excellent yields with excellent enantioselectivities and generally high diastereoselectivities.
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Affiliation(s)
- Tong-De Tan
- State Key Laboratory of Physical Chemistry of Solid Surfaces and Key Laboratory for Chemical Biology of Fujian Province, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
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22
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Quintard A, Sperandio C, Rodriguez J. Modular Enantioselective Synthesis of an Advanced Pentahydroxy Intermediate of Antimalarial Bastimolide A and of Fluorinated and Chlorinated Analogues. Org Lett 2018; 20:5274-5277. [PMID: 30129767 DOI: 10.1021/acs.orglett.8b02213] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A short enantioselective catalytic synthesis of the key C15-C27 fragment of bastimolide A, a natural product showing promising antimalarial bioactivity, is disclosed. The strategic insertion of halogen atoms such as fluorine and chlorine by enantioselective organocatalytic halogenations allowed an excellent stereochemical control for the formation of complex acyclic fragments bearing up to four stereogenic centers. Furthermore, besides the formation of the 1,5,7,9,13-pentahydroxy fragment of the natural product, this strategy opens the route to the modulation of the bioactivity by halogenohydrins.
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Affiliation(s)
- Adrien Quintard
- Aix Marseille Univ , CNRS, Centrale Marseille, iSm2 , Marseille , France
| | - Céline Sperandio
- Aix Marseille Univ , CNRS, Centrale Marseille, iSm2 , Marseille , France
| | - Jean Rodriguez
- Aix Marseille Univ , CNRS, Centrale Marseille, iSm2 , Marseille , France
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23
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Flores-Constante G, Sánchez-Chávez AC, Polindara-García LA. A Convenient Synthesis of 1,2-Disubstituted-cis
-3,4-Dihydroxypyrrolidines via an Ugi-Four-Component-Reaction/Cycloisomerization/Dihydroxylation Protocol. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800756] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Gemma Flores-Constante
- Instituto de Química; Universidad Nacional Autónoma de México; Ciudad Universitaria 04510 México, D.F. México
| | - Anahí C. Sánchez-Chávez
- Instituto de Química; Universidad Nacional Autónoma de México; Ciudad Universitaria 04510 México, D.F. México
| | - Luis A. Polindara-García
- Instituto de Química; Universidad Nacional Autónoma de México; Ciudad Universitaria 04510 México, D.F. México
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24
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Bella M, Šesták S, Moncoľ J, Koóš M, Poláková M. Synthesis of 1,4-imino-L-lyxitols modified at C-5 and their evaluation as inhibitors of GH38 α-mannosidases. Beilstein J Org Chem 2018; 14:2156-2162. [PMID: 30202468 PMCID: PMC6122390 DOI: 10.3762/bjoc.14.189] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2018] [Accepted: 07/24/2018] [Indexed: 01/01/2023] Open
Abstract
A synthetic approach to 1,4-imino-L-lyxitols with various modifications at the C-5 position is reported. These imino-L-lyxitol cores were used for the preparation of a series of N-(4-halobenzyl)polyhydroxypyrrolidines. An impact of the C-5 modification on the inhibition and selectivity against GH38 α-mannosidases from Drosophila melanogaster, the Golgi (GMIIb) and lysosomal (LManII) mannosidases and commercial jack bean α-mannosidase from Canavalia ensiformis was evaluated. The modification at C-5 affected their inhibitory activity against the target GMIIb enzyme. In contrast, no inhibition effect of the pyrrolidines against LManII was observed. The modification of the imino-L-lyxitol core is therefore a suitable motif for the design of inhibitors with desired selectivity against the target GMIIb enzyme.
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Affiliation(s)
- Maroš Bella
- Department of Glycochemistry, Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-845 38, Bratislava, Slovakia
| | - Sergej Šesták
- Department of Glycochemistry, Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-845 38, Bratislava, Slovakia
| | - Ján Moncoľ
- Department of Inorganic Chemistry, Faculty of Chemical and Food Technology, Radlinského 9, SK-812 37 Bratislava, Slovakia
| | - Miroslav Koóš
- Department of Glycochemistry, Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-845 38, Bratislava, Slovakia
| | - Monika Poláková
- Department of Glycochemistry, Institute of Chemistry, Slovak Academy of Sciences, Dúbravská cesta 9, SK-845 38, Bratislava, Slovakia
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25
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Fontelle N, Yamamoto A, Arda A, Jiménez-Barbero J, Kato A, Désiré J, Blériot Y. 2-Acetamido-2-deoxy-l-iminosugarC-Alkyl andC-Aryl Glycosides: Synthesis and Glycosidase Inhibition. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800678] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Nathalie Fontelle
- IC2MP-UMR CNRS 7285; Université de Poitiers; Equipe “Synthèse Organique”; Université de Poitiers; 4 rue Michel Brunet 86073 Poitiers cedex 9 France
| | - Arisa Yamamoto
- Department of Hospital Pharmacy; University of Toyama; 2630 Sugitani 930-0194 Toyama Japan
| | - Ana Arda
- Parque Tecnológico de Bizkaia; CIC bioGUNE; Edif. 801A-1° 48160 Derio-Bizkaia Spain
| | | | - Atsushi Kato
- Department of Hospital Pharmacy; University of Toyama; 2630 Sugitani 930-0194 Toyama Japan
| | - Jérôme Désiré
- IC2MP-UMR CNRS 7285; Université de Poitiers; Equipe “Synthèse Organique”; Université de Poitiers; 4 rue Michel Brunet 86073 Poitiers cedex 9 France
| | - Yves Blériot
- IC2MP-UMR CNRS 7285; Université de Poitiers; Equipe “Synthèse Organique”; Université de Poitiers; 4 rue Michel Brunet 86073 Poitiers cedex 9 France
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26
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Prasad SS, Reddy NR, Baskaran S. One-Pot Synthesis of Structurally Diverse Iminosugar-Based Hybrid Molecules. J Org Chem 2018; 83:9604-9618. [DOI: 10.1021/acs.joc.8b00748] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Sure Siva Prasad
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, India
| | | | - Sundarababu Baskaran
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, India
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27
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Ponath S, Menger M, Grothues L, Weber M, Lentz D, Strohmann C, Christmann M. Mechanistic Studies on the Organocatalytic α-Chlorination of Aldehydes: The Role and Nature of Off-Cycle Intermediates. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201806261] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Sebastian Ponath
- Freie Universität Berlin; Institute of Chemistry and Biochemistry; Takustr. 3 14195 Berlin Germany
| | - Martina Menger
- Freie Universität Berlin; Institute of Chemistry and Biochemistry; Takustr. 3 14195 Berlin Germany
| | - Lydia Grothues
- Freie Universität Berlin; Institute of Chemistry and Biochemistry; Takustr. 3 14195 Berlin Germany
| | - Manuela Weber
- Freie Universität Berlin; Institute of Chemistry and Biochemistry; Takustr. 3 14195 Berlin Germany
| | - Dieter Lentz
- Freie Universität Berlin; Institute of Chemistry and Biochemistry; Takustr. 3 14195 Berlin Germany
| | - Carsten Strohmann
- Technische Universität Dortmund; Faculty of Chemistry and Chemical Biology; Otto-Hahn-Str. 6 44227 Dortmund Germany
| | - Mathias Christmann
- Freie Universität Berlin; Institute of Chemistry and Biochemistry; Takustr. 3 14195 Berlin Germany
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28
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Ponath S, Menger M, Grothues L, Weber M, Lentz D, Strohmann C, Christmann M. Mechanistic Studies on the Organocatalytic α-Chlorination of Aldehydes: The Role and Nature of Off-Cycle Intermediates. Angew Chem Int Ed Engl 2018; 57:11683-11687. [PMID: 29999220 DOI: 10.1002/anie.201806261] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Indexed: 01/22/2023]
Abstract
Herein we report the isolation and characterization of aminal intermediates in the organocatalytic α-chlorination of aldehydes. These species are stable covalent ternary adducts of the substrate, the catalyst and the chlorinating reagent. NMR-assisted kinetic studies and isotopic labeling experiments with the isolated intermediate did not support its involvement in downstream stereoselective processes as proposed by Blackmond. By tuning the reactivity of the chlorinating reagent, we were able to suppress the accumulation of rate-limiting off-cycle intermediates. As a result, an efficient and highly enantioselective catalytic system with a broad functional group tolerance was developed.
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Affiliation(s)
- Sebastian Ponath
- Freie Universität Berlin, Institute of Chemistry and Biochemistry, Takustr. 3, 14195, Berlin, Germany
| | - Martina Menger
- Freie Universität Berlin, Institute of Chemistry and Biochemistry, Takustr. 3, 14195, Berlin, Germany
| | - Lydia Grothues
- Freie Universität Berlin, Institute of Chemistry and Biochemistry, Takustr. 3, 14195, Berlin, Germany
| | - Manuela Weber
- Freie Universität Berlin, Institute of Chemistry and Biochemistry, Takustr. 3, 14195, Berlin, Germany
| | - Dieter Lentz
- Freie Universität Berlin, Institute of Chemistry and Biochemistry, Takustr. 3, 14195, Berlin, Germany
| | - Carsten Strohmann
- Technische Universität Dortmund, Faculty of Chemistry and Chemical Biology, Otto-Hahn-Str. 6, 44227, Dortmund, Germany
| | - Mathias Christmann
- Freie Universität Berlin, Institute of Chemistry and Biochemistry, Takustr. 3, 14195, Berlin, Germany
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29
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Nicolas C, Martin OR. Glycoside Mimics from Glycosylamines: Recent Progress. Molecules 2018; 23:molecules23071612. [PMID: 30004451 PMCID: PMC6100084 DOI: 10.3390/molecules23071612] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 06/26/2018] [Accepted: 06/28/2018] [Indexed: 01/08/2023] Open
Abstract
Glycosylamines are valuable sugar derivatives that have attracted much attention as synthetic intermediates en route to iminosugar-C-glycosyl compounds. Iminosugars are among the most important glycomimetics reported to date due to their powerful activities as inhibitors of a wide variety of glycosidases and glycosyltransferases, as well as for their use as pharmacological chaperones. As they provide ready access to these important glycoside mimics, we have reviewed the most significant glycosylamine-based methodologies developed to date, with a special emphasis on the literature reported after 2006. The groups of substrates covered include N-alkyl- and N-benzyl-glycosylamines, N-glycosylhydroxylamines, N-(alkoxycarbonyl)-, and N-tert-butanesulfinyl-glycosylamines.
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Affiliation(s)
- Cyril Nicolas
- Institute of Organic and Analytical Chemistry, UMR 7311, University of Orleans and CNRS, Rue de Chartres, BP 6759, 45067 Orleans CEDEX 2, France.
| | - Olivier R Martin
- Institute of Organic and Analytical Chemistry, UMR 7311, University of Orleans and CNRS, Rue de Chartres, BP 6759, 45067 Orleans CEDEX 2, France.
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30
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Mena-Barragán T, García-Moreno MI, Sevšek A, Okazaki T, Nanba E, Higaki K, Martin NI, Pieters RJ, Fernández JMG, Mellet CO. Probing the Inhibitor versus Chaperone Properties of sp²-Iminosugars towards Human β-Glucocerebrosidase: A Picomolar Chaperone for Gaucher Disease. Molecules 2018; 23:E927. [PMID: 29673163 PMCID: PMC6017062 DOI: 10.3390/molecules23040927] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2018] [Revised: 03/26/2018] [Accepted: 04/12/2018] [Indexed: 12/14/2022] Open
Abstract
A series of sp²-iminosugar glycomimetics differing in the reducing or nonreducing character, the configurational pattern (d-gluco or l-ido), the architecture of the glycone skeleton, and the nature of the nonglycone substituent has been synthesized and assayed for their inhibition properties towards commercial glycosidases. On the basis of their affinity and selectivity towards GH1 β-glucosidases, reducing and nonreducing bicyclic derivatives having a hydroxylation profile of structural complementarity with d-glucose and incorporating an N′-octyl-isourea or -isothiourea segment were selected for further evaluation of their inhibitory/chaperoning potential against human glucocerebrosidase (GCase). The 1-deoxynojirimycin (DNJ)-related nonreducing conjugates behaved as stronger GCase inhibitors than the reducing counterparts and exhibited potent chaperoning capabilities in Gaucher fibroblasts hosting the neuronopathic G188S/G183W mutation, the isothiourea derivative being indeed one of the most efficient chaperone candidates reported up to date (70% activity enhancement at 20 pM). At their optimal concentration, the four selected compounds promoted mutant GCase activity enhancements over 3-fold; yet, the inhibitor/chaperoning balance became unfavorable at much lower concentration for nonreducing as compared to reducing derivatives.
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Affiliation(s)
- Teresa Mena-Barragán
- Department of Organic Chemistry, Faculty of Chemistry, University of Sevilla, C/Profesor García González 1, 41011 Sevilla, Spain.
| | - M Isabel García-Moreno
- Department of Organic Chemistry, Faculty of Chemistry, University of Sevilla, C/Profesor García González 1, 41011 Sevilla, Spain.
| | - Alen Sevšek
- Department of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands.
| | - Tetsuya Okazaki
- Division of Child Neurology, Department of Brain and Neurosciences, Faculty of Medicine, Tottori University, Yonago 680-8550, Japan.
| | - Eiji Nanba
- Division of Functional Genomics, Research Center for Bioscience and Technology, Tottori University, 86 Nishi-cho, Yonago 683-8503, Japan.
| | - Katsumi Higaki
- Division of Functional Genomics, Research Center for Bioscience and Technology, Tottori University, 86 Nishi-cho, Yonago 683-8503, Japan.
| | - Nathaniel I Martin
- Department of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands.
| | - Roland J Pieters
- Department of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands.
| | - José M García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC-University of Sevilla, Avda. Americo Vespucio 49, 41092 Sevilla, Spain.
| | - Carmen Ortiz Mellet
- Department of Organic Chemistry, Faculty of Chemistry, University of Sevilla, C/Profesor García González 1, 41011 Sevilla, Spain.
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31
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Seley-Radtke KL, Yates MK. The evolution of nucleoside analogue antivirals: A review for chemists and non-chemists. Part 1: Early structural modifications to the nucleoside scaffold. Antiviral Res 2018; 154:66-86. [PMID: 29649496 PMCID: PMC6396324 DOI: 10.1016/j.antiviral.2018.04.004] [Citation(s) in RCA: 302] [Impact Index Per Article: 50.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2018] [Revised: 03/22/2018] [Accepted: 04/04/2018] [Indexed: 02/07/2023]
Abstract
This is the first of two invited articles reviewing the development of nucleoside-analogue antiviral drugs, written for a target audience of virologists and other non-chemists, as well as chemists who may not be familiar with the field. Rather than providing a simple chronological account, we have examined and attempted to explain the thought processes, advances in synthetic chemistry and lessons learned from antiviral testing that led to a few molecules being moved forward to eventual approval for human therapies, while others were discarded. The present paper focuses on early, relatively simplistic changes made to the nucleoside scaffold, beginning with modifications of the nucleoside sugars of Ara-C and other arabinose-derived nucleoside analogues in the 1960's. A future paper will review more recent developments, focusing especially on more complex modifications, particularly those involving multiple changes to the nucleoside scaffold. We hope that these articles will help virologists and others outside the field of medicinal chemistry to understand why certain drugs were successfully developed, while the majority of candidate compounds encountered barriers due to low-yielding synthetic routes, toxicity or other problems that led to their abandonment. This is the first of two invited articles reviewing the development of nucleoside-analogue antiviral drugs. It is written for a target audience of virologists and other non-chemists, and for chemists unfamiliar with the field. Numerous modifications have been made to the nucleoside scaffold in order to impart therapeutic benefits. Nucleoside modifications led to the development of potent antivirals such as acyclovir, entecavir, and tenofovir. We examine thought processes, progress in synthetic chemistry and results of antiviral testing that led to approved drugs.
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Affiliation(s)
- Katherine L Seley-Radtke
- 1000 Hilltop Circle, Department of Chemistry & Biochemistry, University of Maryland, Baltimore County, Baltimore, MD, USA.
| | - Mary K Yates
- 1000 Hilltop Circle, Department of Chemistry & Biochemistry, University of Maryland, Baltimore County, Baltimore, MD, USA
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Temburnikar K, Seley-Radtke KL. Recent advances in synthetic approaches for medicinal chemistry of C-nucleosides. Beilstein J Org Chem 2018; 14:772-785. [PMID: 29719574 PMCID: PMC5905277 DOI: 10.3762/bjoc.14.65] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2017] [Accepted: 03/06/2018] [Indexed: 12/13/2022] Open
Abstract
C-nucleosides have intrigued biologists and medicinal chemists since their discovery in 1950's. In that regard, C-nucleosides and their synthetic analogues have resulted in promising leads in drug design. Concurrently, advances in chemical syntheses have contributed to structural diversity and drug discovery efforts. Convergent and modular approaches to synthesis have garnered much attention in this regard. Among them nucleophilic substitution at C1' has seen wide applications providing flexibility in synthesis, good yields, the ability to maneuver stereochemistry as well as to incorporate structural modifications. In this review, we describe recent reports on the modular synthesis of C-nucleosides with a focus on D-ribonolactone and sugar modifications that have resulted in potent lead molecules.
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Affiliation(s)
- Kartik Temburnikar
- Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, 725 N. Wolfe St. Baltimore, MD 21205, United States
| | - Katherine L Seley-Radtke
- Department of Chemistry and Biochemistry, University of Maryland Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21250, United States
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33
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Meanwell M, Sutherland M, Britton R. Application of sequential proline-catalyzed α-chlorination and aldol reactions in the total synthesis of 1-deoxygalactonojirimycin. CAN J CHEM 2018. [DOI: 10.1139/cjc-2017-0318] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A short enantioselective total synthesis of 1-deoxygalactonojirimycin (migalastat) has been achieved that does not rely on chiral pool starting materials or biocatalysis. Instead, this synthesis exploits a one-pot proline-catalyzed α-chlorination and aldol reaction of a commercially available aldehyde to assemble the entire carbon skeleton in a single step. The key role played by a nitrogen protecting group in the final epoxide opening reaction is highlighted as is the amenability to access structural analogues using this route.
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Affiliation(s)
- Michael Meanwell
- Department of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada
- Department of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada
| | - Mathew Sutherland
- Department of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada
- Department of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada
| | - Robert Britton
- Department of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada
- Department of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada
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Prasad SS, Baskaran S. Iminosugar C-Nitromethyl Glycoside: Stereoselective Synthesis of Isoxazoline and Isoxazole-Fused Bicyclic Iminosugars. J Org Chem 2018; 83:1558-1564. [PMID: 29313687 DOI: 10.1021/acs.joc.7b02803] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A simple and efficient method for the stereoselective synthesis of isoxazoline/isoxazole-fused iminosugar derivatives has been developed using intramolecular nitrile oxide cycloaddition (INOC) as a key step. Iminosugar C-nitromethyl glycosides, derived from simple carbohydrates, served as excellent nitrile oxide precursors in 1,3-dipolar cycloaddition reactions. N-Alkenyl iminosugar C-nitromethyl glycosides afforded novel isoxazoline-fused indolizidine-, pyrrolizidine-, and quinolizidine-based iminosugars in excellent yields with a high degree of stereoselectivity, whereas N-alkynyl iminosugar C-nitromethyl glycosides furnished the corresponding isoxazole containing tricyclic iminosugars in very good yields.
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Affiliation(s)
- Sure Siva Prasad
- Department of Chemistry, Indian Institute of Technology Madras , Chennai 600036, India
| | - Sundarababu Baskaran
- Department of Chemistry, Indian Institute of Technology Madras , Chennai 600036, India
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Cocaud C, Maujoin A, Zheng RB, Lowary TL, Rodrigues N, Percina N, Chartier A, Buron F, Routier S, Nicolas C, Martin OR. Triazole-Linked Iminosugars and Aromatic Systems as Simplified UDP-Galf
Mimics: Synthesis and Preliminary Evaluation as Galf
-Transferase Inhibitors. European J Org Chem 2017. [DOI: 10.1002/ejoc.201701283] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Chloé Cocaud
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Audrey Maujoin
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Ruixiang B. Zheng
- Alberta Glycomics Centre and Department of Chemistry; University of Alberta; GunningLemieux Chemistry Centre; 11227 Saskatchewan Drive T6G 2G2 Edmonton, Alberta Canada
| | - Todd L. Lowary
- Alberta Glycomics Centre and Department of Chemistry; University of Alberta; GunningLemieux Chemistry Centre; 11227 Saskatchewan Drive T6G 2G2 Edmonton, Alberta Canada
| | - Nuno Rodrigues
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Nathalie Percina
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Agnes Chartier
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Frédéric Buron
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Sylvain Routier
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Cyril Nicolas
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
| | - Olivier R. Martin
- Institut de Chimie Organique et Analytique; UMR CNRS 7311; Université d'Orléans; Rue de Chartres, BP 6759 45067 Orléans CEDEX 2 France
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Prasad SS, Senthilkumar S, Srivastava A, Baskaran S. Iminosugar C-Nitromethyl Glycosides and Divergent Synthesis of Bicyclic Iminosugars. Org Lett 2017; 19:4403-4406. [DOI: 10.1021/acs.orglett.7b02175] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Sure Siva Prasad
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, India
| | | | - Akriti Srivastava
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, India
| | - Sundarababu Baskaran
- Department of Chemistry, Indian Institute of Technology Madras, Chennai 600036, India
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38
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Quintard A, Rodriguez J. Bicatalyzed Three-Component Stereoselective Decarboxylative Fluoro-Aldolization for the Construction of Elongated Fluorohydrins. ACS Catal 2017. [DOI: 10.1021/acscatal.7b02353] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Adrien Quintard
- Aix Marseille Univ, CNRS, Centrale Marseille,
iSm2, Marseille, 13397, France
| | - Jean Rodriguez
- Aix Marseille Univ, CNRS, Centrale Marseille,
iSm2, Marseille, 13397, France
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Robertson J, Stevens K. Pyrrolizidine alkaloids: occurrence, biology, and chemical synthesis. Nat Prod Rep 2017; 34:62-89. [PMID: 27782262 DOI: 10.1039/c5np00076a] [Citation(s) in RCA: 98] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Covering: 2013 up to the end of 2015This review covers the isolation and structure of new pyrrolizidines; pyrrolizidine biosynthesis; biological activity, including the occurrence of pyrrolizidines as toxic components or contaminants in foods and beverages; and formal and total syntheses of naturally-occurring pyrrolizidine alkaloids and closely related non-natural analogues.
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Affiliation(s)
- Jeremy Robertson
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford, OX1 3TA, UK.
| | - Kiri Stevens
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford, OX1 3TA, UK.
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40
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Sánchez-Fernández EM, García Fernández JM, Mellet CO. Glycomimetic-based pharmacological chaperones for lysosomal storage disorders: lessons from Gaucher, GM1-gangliosidosis and Fabry diseases. Chem Commun (Camb) 2016; 52:5497-515. [PMID: 27043200 DOI: 10.1039/c6cc01564f] [Citation(s) in RCA: 112] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Lysosomal storage disorders (LSDs) are often caused by mutations that destabilize native folding and impair the trafficking of enzymes, leading to premature endoplasmic reticulum (ER)-associated degradation, deficiencies of specific hydrolytic functions and aberrant storage of metabolites in the lysosomes. Enzyme replacement therapy (ERT) and substrate reduction therapy (SRT) are available for a few of these conditions, but most remain orphan. A main difficulty is that virtually all LSDs involve neurological decline and neither proteins nor the current SRT drugs can cross the blood-brain barrier. Twenty years ago a new therapeutic paradigm better suited for neuropathic LSDs was launched, namely pharmacological chaperone (PC) therapy. PCs are small molecules capable of binding to the mutant protein at the ER, inducing proper folding, restoring trafficking and increasing enzyme activity and substrate processing in the lysosome. In many LSDs the mutated protein is a glycosidase and the accumulated substrate is an oligo- or polysaccharide or a glycoconjugate, e.g. a glycosphingolipid. Although it might appear counterintuitive, substrate analogues (glycomimetics) behaving as competitive glycosidase inhibitors are good candidates to perform PC tasks. The advancements in the knowledge of the molecular basis of LSDs, including enzyme structures, binding modes, trafficking pathways and substrate processing mechanisms, have been put forward to optimize PC selectivity and efficacy. Moreover, the chemical versatility of glycomimetics and the variety of structures at hand allow simultaneous optimization of chaperone and pharmacokinetic properties. In this Feature Article we review the advancements made in this field in the last few years and the future outlook through the lessons taught by three archetypical LSDs: Gaucher disease, GM1-gangliosidosis and Fabry disease.
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Affiliation(s)
- Elena M Sánchez-Fernández
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012, Sevilla, Spain.
| | - José M García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC - Universidad de Sevilla, Avda. Américo Vespucio 49, 41092 Sevilla, Spain.
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012, Sevilla, Spain.
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41
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Adamson C, Pengelly RJ, Shamsi Kazem Abadi S, Chakladar S, Draper J, Britton R, Gloster TM, Bennet AJ. Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars. Angew Chem Int Ed Engl 2016; 55:14978-14982. [PMID: 27783466 PMCID: PMC5132143 DOI: 10.1002/anie.201607431] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2016] [Indexed: 11/25/2022]
Abstract
Glycoside hydrolases (GHs) have attracted considerable attention as targets for therapeutic agents, and thus mechanism-based inhibitors are of great interest. We report the first structural analysis of a carbocyclic mechanism-based GH inactivator, the results of which show that the two Michaelis complexes are in 2 H3 conformations. We also report the synthesis and reactivity of a fluorinated analogue and the structure of its covalently linked intermediate (flattened 2 H3 half-chair). We conclude that these inactivator reactions mainly involve motion of the pseudo-anomeric carbon atom, knowledge that should stimulate the design of new transition-state analogues for use as chemical biology tools.
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Affiliation(s)
| | - Robert J. Pengelly
- Biomedical Sciences Research ComplexUniversity of St AndrewsNorth HaughSt Andrews, FifeUK
| | | | - Saswati Chakladar
- Department of ChemistrySimon Fraser UniversityBurnabyBritish ColumbiaCanada
| | - Jason Draper
- Department of ChemistrySimon Fraser UniversityBurnabyBritish ColumbiaCanada
| | - Robert Britton
- Department of ChemistrySimon Fraser UniversityBurnabyBritish ColumbiaCanada
| | - Tracey M. Gloster
- Biomedical Sciences Research ComplexUniversity of St AndrewsNorth HaughSt Andrews, FifeUK
| | - Andrew J. Bennet
- Department of ChemistrySimon Fraser UniversityBurnabyBritish ColumbiaCanada
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42
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Chinthapally K, Karthik R, Senthilkumar S, Baskaran S. A Short and Efficient Synthesis of Iminosugar 2-Acyl Indolizidine. Chemistry 2016; 23:533-536. [DOI: 10.1002/chem.201604376] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2016] [Indexed: 12/24/2022]
Affiliation(s)
- Kiran Chinthapally
- Department of Chemistry; Indian Institute of Technology Madras; Chennai 600036 India
| | - Reshamina Karthik
- Department of Chemistry; Indian Institute of Technology Madras; Chennai 600036 India
| | | | - Sundarababu Baskaran
- Department of Chemistry; Indian Institute of Technology Madras; Chennai 600036 India
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43
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Adamson C, Pengelly RJ, Shamsi Kazem Abadi S, Chakladar S, Draper J, Britton R, Gloster TM, Bennet AJ. Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201607431] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Christopher Adamson
- Department of Chemistry; Simon Fraser University; Burnaby British Columbia Canada
| | - Robert J. Pengelly
- Biomedical Sciences Research Complex; University of St Andrews; North Haugh St Andrews, Fife UK
| | - Saeideh Shamsi Kazem Abadi
- Department of Molecular Biology and Biochemistry; Simon Fraser University; Burnaby British Columbia Canada
| | - Saswati Chakladar
- Department of Chemistry; Simon Fraser University; Burnaby British Columbia Canada
| | - Jason Draper
- Department of Chemistry; Simon Fraser University; Burnaby British Columbia Canada
| | - Robert Britton
- Department of Chemistry; Simon Fraser University; Burnaby British Columbia Canada
| | - Tracey M. Gloster
- Biomedical Sciences Research Complex; University of St Andrews; North Haugh St Andrews, Fife UK
| | - Andrew J. Bennet
- Department of Chemistry; Simon Fraser University; Burnaby British Columbia Canada
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44
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Abellán Flos M, García Moreno MI, Ortiz Mellet C, García Fernández JM, Nierengarten JF, Vincent SP. Potent Glycosidase Inhibition with Heterovalent Fullerenes: Unveiling the Binding Modes Triggering Multivalent Inhibition. Chemistry 2016; 22:11450-60. [DOI: 10.1002/chem.201601673] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Indexed: 12/24/2022]
Affiliation(s)
- Marta Abellán Flos
- Département de Chimie, Laboratoire de Chimie Bio-Organique; University of Namur (UNamur); rue de Bruxelles 61 5000 Namur Belgium
| | - M. Isabel García Moreno
- Departamento de Química Orgánica; Facultad de Química; Universidad de Sevilla; C/Prof. García González 1 41012 Sevilla Spain
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica; Facultad de Química; Universidad de Sevilla; C/Prof. García González 1 41012 Sevilla Spain
| | - Jose Manuel García Fernández
- Instituto de Investigaciones Químicas (IIQ); CSIC - Universidad de Sevilla; Av. Américo Vespucio 49, Isla de la Cartuja 41092 Sevilla Spain
| | - Jean-Francois Nierengarten
- Laboratoire de Chimie des Matériaux Moléculaires; Université de Strasbourg et CNRS (UMR 7509); Ecole Européenne de Chimie, Polymères et Matériaux; 25 rue Becquerel 67087 Strasbourg France
| | - Stéphane P. Vincent
- Département de Chimie, Laboratoire de Chimie Bio-Organique; University of Namur (UNamur); rue de Bruxelles 61 5000 Namur Belgium
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45
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Chung WJ, Vanderwal CD. Stereoselective Halogenation in Natural Product Synthesis. Angew Chem Int Ed Engl 2016; 55:4396-434. [PMID: 26833878 PMCID: PMC6028003 DOI: 10.1002/anie.201506388] [Citation(s) in RCA: 196] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2015] [Revised: 08/27/2015] [Indexed: 01/23/2023]
Abstract
At last count, nearly 5000 halogenated natural products have been discovered. In approximately half of these compounds, the carbon atom to which the halogen is bound is sp(3) -hybridized; therefore, there are an enormous number of natural products for which stereocontrolled halogenation must be a critical component of any synthesis strategy. In this Review, we critically discuss the methods and strategies used for stereoselective introduction of halogen atoms in the context of natural product synthesis. Using the successes of the past, we also attempt to identify gaps in our synthesis technology that would aid the synthesis of halogenated natural products, as well as existing methods that have not yet seen application in complex molecule synthesis. The chemistry described herein demonstrates yet again how natural products continue to provide the inspiration for critical advances in chemical synthesis.
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Affiliation(s)
- Won-jin Chung
- Department of Chemistry, Gwangju Institute of Science and Technology, Gwangju, South Korea.
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Abstract
A concise stereoselective synthesis of (-)-lentiginosine, an iminosugar endowed with an interesting proapoptotic activity, has been accomplished using an enantiopure pyrroline N-oxide building block derived from d-tartaric acid. Key steps are a totally diastereoselective nucleophilic addition to the cyclic nitrone followed by a combination of two simultaneous and two tandem reactions occurring under the same conditions in a single laboratory operation. Natural (+)-lentiginosine can be synthesized by the same method but starting from l-tartaric acid.
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Affiliation(s)
- Franca M Cordero
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze , via della Lastruccia 13, 50019 Sesto Fiorentino (FI), Italy
| | - Carolina Vurchio
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze , via della Lastruccia 13, 50019 Sesto Fiorentino (FI), Italy
| | - Alberto Brandi
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze , via della Lastruccia 13, 50019 Sesto Fiorentino (FI), Italy
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47
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Sánchez-Fernández EM, Gonçalves-Pereira R, Rísquez-Cuadro R, Plata GB, Padrón JM, García Fernández JM, Ortiz Mellet C. Influence of the configurational pattern of sp(2)-iminosugar pseudo N-, S-, O- and C-glycosides on their glycoside inhibitory and antitumor properties. Carbohydr Res 2016; 429:113-22. [PMID: 26850915 DOI: 10.1016/j.carres.2016.01.006] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2015] [Revised: 01/16/2016] [Accepted: 01/18/2016] [Indexed: 01/01/2023]
Abstract
The synthesis of a complete series of cyclic carbamate-type sp(2)-iminosugar N-, S-, O- and C-octyl pseudoglycosides related to nojirimycin, mannojirimycin and galactonojirimycin, all having the α-pseudoanomeric configuration, is reported. The gem-diamine-type N-pseudoglycosides can be accessed directly from the corresponding reducing sp(2)-imisosugar precursors by reaction with octylamine in methanol, whereas per-O-acetyl or 1-fluoro derivatives were used as pseudoglycosyl donors for the preparation of S-pseudoglycosides or O- and C-pseudoglycosides, respectively. Evaluation of their inhibitory properties against a panel of glycosidases evidenced selectivity profiles that strongly depend on the configurational pattern and the nature of the glycosidic linkage. On the contrary, the antiproliferative activity determined against a panel of tumor cell lines was largely independent of the relative orientation of the hydroxyl groups in the sp(2)-iminosugar moiety. Indeed, sp(2)-iminosugar representatives exhibiting significant growth inhibition potencies were identified in all three configurationally different types of compounds studied, namely α-d-gluco, α-d-manno and α-d-galacto glycoside analogs. Interestingly, none of the compounds affected viability and mortality of normal cells at the used concentrations. Altogether, the results strongly suggest that the anticancer activity of amphiphilic sp(2)-iminosugar glycosides might be unrelated, or not solely related, to their glycosidase inhibitory activity.
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Affiliation(s)
- Elena M Sánchez-Fernández
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain.
| | - Rita Gonçalves-Pereira
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain
| | - Rocío Rísquez-Cuadro
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain
| | - Gabriela B Plata
- BioLab, Instituto Universitario de Bio-Orgánica "Antonio González", Centro de Investigaciones Biomédicas de Canarias, Universidad de La Laguna, 38206 La Laguna, Spain
| | - José M Padrón
- BioLab, Instituto Universitario de Bio-Orgánica "Antonio González", Centro de Investigaciones Biomédicas de Canarias, Universidad de La Laguna, 38206 La Laguna, Spain
| | - José M García Fernández
- Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092 Sevilla, Spain
| | - Carmen Ortiz Mellet
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, Profesor García González 1, 41012 Sevilla, Spain.
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48
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Navo CD, Corzana F, Sánchez-Fernández EM, Busto JH, Avenoza A, Zurbano MM, Nanba E, Higaki K, Ortiz Mellet C, García Fernández JM, Peregrina JM. Conformationally-locked C-glycosides: tuning aglycone interactions for optimal chaperone behaviour in Gaucher fibroblasts. Org Biomol Chem 2016; 14:1473-84. [DOI: 10.1039/c5ob02281a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of conformationally locked C-glycosides based on the 3-aminopyrano[3,2-b]pyrrol-2(1H)-one (APP) scaffold has been synthesized.
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Affiliation(s)
- C. D. Navo
- Departamento de Química and Centro de Investigación en Síntesis Química
- Universidad de La Rioja
- 26006 Logroño
- Spain
| | - F. Corzana
- Departamento de Química and Centro de Investigación en Síntesis Química
- Universidad de La Rioja
- 26006 Logroño
- Spain
| | | | - J. H. Busto
- Departamento de Química and Centro de Investigación en Síntesis Química
- Universidad de La Rioja
- 26006 Logroño
- Spain
| | - A. Avenoza
- Departamento de Química and Centro de Investigación en Síntesis Química
- Universidad de La Rioja
- 26006 Logroño
- Spain
| | - M. M. Zurbano
- Departamento de Química and Centro de Investigación en Síntesis Química
- Universidad de La Rioja
- 26006 Logroño
- Spain
| | - E. Nanba
- Division of Functional Genomics
- Research Center for Bioscience and Technology
- Tottori University
- Yonago 683-8503
- Japan
| | - K. Higaki
- Division of Functional Genomics
- Research Center for Bioscience and Technology
- Tottori University
- Yonago 683-8503
- Japan
| | - C. Ortiz Mellet
- Departamento de Química Orgánica
- Facultad de Química
- Universidad de Sevilla
- 41012 Sevilla
- Spain
| | - J. M. García Fernández
- Instituto de Investigaciones Químicas (IIQ)
- CSIC – Universidad de Sevilla
- 41092 Sevilla
- Spain
| | - J. M. Peregrina
- Departamento de Química and Centro de Investigación en Síntesis Química
- Universidad de La Rioja
- 26006 Logroño
- Spain
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49
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Malinowski M, Rowicki T, Guzik P, Gryszel M, Łapczyński S, Wielechowska M, Czerwińska K, Madura I, Sas W. [1,4]-sigmatropic rearrangement of chiral nitrones and their utilization in the synthesis of new iminosugars. Org Biomol Chem 2016; 14:470-482. [DOI: 10.1039/c5ob01432h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A new mechanism of nitrone epimerization via [1,4]-sigmatropic rearrangement was proposed and a set of epimeric iminosugars was synthesized.
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Affiliation(s)
- Maciej Malinowski
- Faculty of Chemistry
- Warsaw University of Technology
- 00-664 Warsaw
- Poland
| | - Tomasz Rowicki
- Faculty of Chemistry
- Warsaw University of Technology
- 00-664 Warsaw
- Poland
| | - Patrycja Guzik
- Faculty of Chemistry
- Warsaw University of Technology
- 00-664 Warsaw
- Poland
| | - Maciej Gryszel
- Faculty of Chemistry
- Warsaw University of Technology
- 00-664 Warsaw
- Poland
| | | | | | | | - Izabela Madura
- Faculty of Chemistry
- Warsaw University of Technology
- 00-664 Warsaw
- Poland
| | - Wojciech Sas
- Faculty of Chemistry
- Warsaw University of Technology
- 00-664 Warsaw
- Poland
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50
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Csatayová K, Davies SG, Figuccia AL, Fletcher AM, Ford JG, Lee JA, Roberts PM, Saward BG, Song H, Thomson JE. Asymmetric syntheses of polysubstituted homoprolines and homoprolinols. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.10.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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